Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
C04p56300 C04 - View
A04p20530 A04 - View
A10p18930 A10 - View
BNapus_Darmor_BZH_scaffold_38p01070 BNapus_Darmor_BZH_scaffold_38 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G13630 LG-1 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.FWIM6U PTHR13078//PTHR22891//PTHR22891:SF20 - FAMILY NOT NAMED // EUKARYOTIC TRANSLATION INITIATION FACTOR 2C // PROTEIN ARGONAUTE 4-RELATED arahy.Tifrunner.gnm1.Arahy.07 - View
Arabidopsis thaliana AT2G27040 Argonaute family protein AGO4 is a member of a class of PAZ/PIWI domain containing proteins involved in siRNA mediated gene silencing.Loss of function mutations have reduced site specific CpNpG and CpHpH methylation and increased susceptibility to bacterial pathogens. ARGONAUTE 4 (AGO4)%3B FUNCTIONS IN: siRNA binding%3B INVOLVED IN: in 6 processes%3B LOCATED IN: nuclear euchromatin%2C nucleolus%2C Cajal body%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811)%2C Stem cell self-renewal protein Piwi (InterPro:IPR003165)%2C Argonaute/Dicer protein%2C PAZ (InterPro:IPR003100)%2C Polynucleotidyl transferase%2C ribonuclease H fold (InterPro:IPR012337)%3B BEST Arabidopsis thaliana protein match is: Argonaute family protein (TAIR:AT5G21150.1)%3B Has 1929 Blast hits to 1875 proteins in 205 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1009%3B Fungi - 290%3B Plants - 478%3B Viruses - 0%3B Other Eukaryotes - 152 (source: NCBI BLink). Chr2 - View
Brassica carinata BcaB08g36476 ChrB08 + View
Brassica carinata BcaC03g13836 ChrC03 + View
Brassica carinata BcaB05g22769 ChrB05 - View
Brassica oleracea BolC2t07102H C2 + View
Brassica oleracea BolC9t58352H C9 - View
Brassica rapa BraA02t05621Z A02 + View
Brassica rapa BraA10t43970Z A10 - View
Cicer arietinum L. Ca_06159_v3 Ca_LG2_v3 + View
Corylus avellana Haze_23676 Similar to AGO4: Protein argonaute 4 (Arabidopsis thaliana OX%3D3702) 6 - View
Citrus clementina Ciclev10014186m.g scaffold_2 + View
Cardamine hirsuta CARHR191720 Argonaute family protein Chr6 - View
Cardamine hirsuta CARHR119340 Argonaute family protein Chr4 - View
Carya illinoinensis CiPaw.14G090600 PTHR22891:SF20 - PROTEIN ARGONAUTE 4-RELATED Chr14 + View
Capsella rubella Carub.0004s0753 scaffold_4 - View
Davidia involucrata Dinv10720 GWHABJS00000007 - View
Durio zibethinus Duzib168G1724 NW_019168159.1 - View
Eucalyptus grandis Eucgr.J00634 Chr10 + View
Eucalyptus grandis Eucgr.B03780 Chr02 - View
Fragaria x ananassa FAN25G2001 PTHR22891//PTHR22891:SF20 - EUKARYOTIC TRANSLATION INITIATION FACTOR 2C // PROTEIN ARGONAUTE 4-RELATED Fvb3-1 - View
Fragaria vesca FvH4_3g27260 PTHR22891:SF20 - PROTEIN ARGONAUTE 4-RELATED Fvb3 + View
Gossypium hirsutum Gohir.A05G101800 PTHR22891//PTHR22891:SF20 - EUKARYOTIC TRANSLATION INITIATION FACTOR 2C // PROTEIN ARGONAUTE 4-RELATED A05 + View
Glycine max Glyma.02G274900 PTHR22891//PTHR22891:SF20 - EUKARYOTIC TRANSLATION INITIATION FACTOR 2C // PROTEIN ARGONAUTE 4-RELATED Gm02 + View
Glycine max Glyma.14G041100 PTHR22891//PTHR22891:SF20 - EUKARYOTIC TRANSLATION INITIATION FACTOR 2C // PROTEIN ARGONAUTE 4-RELATED Gm14 - View
Hydrangea macrophylla Hma1.2p1_0218F.1_g092800 Hma1.2p1_0218F.1 - View
Lupinus albus Lalb_Chr04g0249631 PTHR22891:SF20 - PROTEIN ARGONAUTE 4-RELATED Lalb_Chr04 - View
Lupinus albus Lalb_Chr17g0347571 PTHR22891//PTHR22891:SF20 - EUKARYOTIC TRANSLATION INITIATION FACTOR 2C // PROTEIN ARGONAUTE 4-RELATED Lalb_Chr17 + View
Lupinus albus Lalb_Chr14g0370361 PTHR22891//PTHR22891:SF34 - EUKARYOTIC TRANSLATION INITIATION FACTOR 2C // SUBFAMILY NOT NAMED Lalb_Chr14 - View
Lotus japonicus LjContig00564g0023857 K11593 - eukaryotic translation initiation factor 2C (ELF2C, AGO) Contig00564 - View
Lonicera japonica Lj2C935T1 GWHAAZE00000002 + View
Malus domestica MD11G1182100 Argonaute family protein Chr11 - View
Malus domestica MD03G1164000 Argonaute family protein Chr03 + View
Medicago truncatula Medtr5g087870 eukaryotic translation initiation factor 2c, putative chr5 + View
Punica granatum PGR102G0604 NC_045129.1 + View
Punica granatum PGR119G0559 NC_045132.1 - View
Prunus persica Prupe.6G154800 PTHR22891:SF20 - PROTEIN ARGONAUTE 4-RELATED Pp06 - View
Pisum sativum Psat2g022680 Piwi domain chr2LG1 - View
Populus trichocarpa Potri.001G219700 PTHR22891//PTHR22891:SF20 - EUKARYOTIC TRANSLATION INITIATION FACTOR 2C // PROTEIN ARGONAUTE 4-RELATED Chr01 + View
Phaseolus vulgaris Phvul.008G206500 PTHR22891:SF20 - PROTEIN ARGONAUTE 4-RELATED Chr08 - View
Rosa chinensis RcHm_v2.0_Chr5g0049901 RcHm_v2.0_Chr5 - View
Salix brachista Sabra16G0124600 GWHAAZH00000016 - View
Schrenkiella parvula Sp6g23370 PTHR22891:SF20 - PROTEIN ARGONAUTE 4-RELATED ch6-6 - View
Solanum pennellii Sopen01g004450 AGO4 is a member of a class of PAZ/PIWI domain containing proteins involved in siRNA mediated gene silencing.Loss of function mutations have reduced site specific CpNpG and CpHpH methylation and increased susceptibility to bacterial pathogens. | ARGONAUTE 4 (AGO4) | CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 , Stem cell self-renewal protein Piwi , Argonaute/Dicer protein, PAZ , Polynucleotidyl transferase, ribonuclease H fold | BEST Arabidopsis thaliana protein match is: Argonaute family protein ., Stem cell self-renewal protein Piwi Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG400027002 AGO4-1 ST4.03ch06 + View
Selenicereus undatus Hund01351 Scaffold_33678 - View
Trochodendron aralioides TAR633G1821 group2 - View
Trochodendron aralioides TAR636G2831 group1 + View
Theobroma cacao Thecc.09G338500 Argonaute family protein Chromosome_9 + View
Tarenaya hassleriana THA.LOC104800485 protein argonaute 4 isoform X1 NW_010969548.1 - View
Tarenaya hassleriana THA.LOC104799583 protein argonaute 4-like NW_010968505.1 - View
Tripterygium wilfordii TWI31G0029 NC_052233.1 - View
Tripterygium wilfordii TWI79G0571 NC_052238.1 + View
Vaccinium macrocarpon vmacro14287 Similar to AGO4: Protein argonaute 4 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 - View