Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
A09p07190 A09 - View
A03p46710 A03 - View
C07p44760 C07 - View
A03p03540 A03 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G18510 LG-3 - View
Actinidia chinensis Actinidia04822 Lachesis_group1 + View
Actinidia chinensis Actinidia16130 Lachesis_group13 + View
Arabidopsis lyrata AL6G18370 scaffold_6 + View
Arabidopsis lyrata AL8G37660 scaffold_8 - View
Amaranthus hybridus Ah.02g114080 AmaHy_arrow1_Scaffold_2 + View
Amaranthus hybridus Ah.11g047720 Replication protein A 70 kDa DNA-binding subunit B (AtRPA70B) (AtRPA1-5) (Replication factor A protein 1B) (Replication protein A 1B) (AtRPA1B) AmaHy_arrow1_Scaffold_11 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.E3U0AR PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT arahy.Tifrunner.gnm1.Arahy.01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.J8WCL7 PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT arahy.Tifrunner.gnm1.Arahy.11 + View
Arabidopsis thaliana AT5G61000 Replication factor-A protein 1-like protein RPA70D%3B FUNCTIONS IN: DNA binding%2C nucleic acid binding%3B INVOLVED IN: DNA replication%3B LOCATED IN: nucleus%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Replication factor-a protein 1 Rpa1 (InterPro:IPR004591)%2C Nucleic acid-binding%2C OB-fold-like (InterPro:IPR016027)%2C Nucleic acid-binding%2C OB-fold (InterPro:IPR012340)%2C Nucleic acid binding%2C OB-fold%2C tRNA/helicase-type (InterPro:IPR004365)%2C Replication factor A%2C C-terminal (InterPro:IPR013955)%2C Replication factor-A protein 1%2C N-terminal (InterPro:IPR007199)%3B BEST Arabidopsis thaliana protein match is: RPA70-kDa subunit B (TAIR:AT5G08020.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT5G08020 RPA70-kDa subunit B Encodes a homolog of Replication Protein A. rpa70b mutants are hypersensitive to UV-B radiation and MMS treatments suggesting a role for this protein in DNA damage repair. RPA70-kDa subunit B (RPA70B)%3B FUNCTIONS IN: DNA binding%2C nucleic acid binding%3B INVOLVED IN: DNA repair%2C response to UV-B%2C DNA replication%3B LOCATED IN: nucleus%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Replication factor-a protein 1 Rpa1 (InterPro:IPR004591)%2C Nucleic acid-binding%2C OB-fold-like (InterPro:IPR016027)%2C Nucleic acid-binding%2C OB-fold (InterPro:IPR012340)%2C Nucleic acid binding%2C OB-fold%2C tRNA/helicase-type (InterPro:IPR004365)%2C Replication factor A%2C C-terminal (InterPro:IPR013955)%2C Replication factor-A protein 1%2C N-terminal (InterPro:IPR007199)%3B BEST Arabidopsis thaliana protein match is: Replication factor-A protein 1-related (TAIR:AT5G61000.1)%3B Has 1056 Blast hits to 1045 proteins in 226 species: Archae - 10%3B Bacteria - 0%3B Metazoa - 213%3B Fungi - 147%3B Plants - 535%3B Viruses - 0%3B Other Eukaryotes - 151 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaC06g33184 ChrC06 + View
Brassica carinata BcaC04g23467 ChrC04 + View
Brassica oleracea BolC3t12936H C3 + View
Brassica oleracea BolC7t44999H C7 - View
Brassica oleracea BolC9t53717H C9 - View
Brassica rapa BraA03t13794Z A03 - View
Brassica rapa BraA09t36368Z A09 - View
Citrus clementina Ciclev10019317m.g scaffold_3 + View
Cardamine hirsuta CARHR274710 70 kDa subunit of replication protein A Chr8 - View
Cardamine hirsuta CARHR205160 70 kDa subunit of replication protein A Chr6 - View
Capsella rubella Carub.0008s2169 PF01336//PF04057//PF08646//PF16900 - OB-fold nucleic acid binding domain (tRNA_anti-codon) // Replication factor-A protein 1, N-terminal domain (Rep-A_N) // Replication factor-A C terminal domain (Rep_fac-A_C) // Replication protein A OB domain (REPA_OB_2) scaffold_8 - View
Capsella rubella Carub.0006s0691 KOG0851 - Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins scaffold_6 + View
Daucus carota DCAR_023168 hypothetical protein DCARv2_Chr6 + View
Davidia involucrata Dinv22775 GWHABJS00000019 - View
Davidia involucrata Dinv17419 GWHABJS00000006 - View
Durio zibethinus Duzib205G0152 NW_019168381.1 + View
Durio zibethinus Duzib084G0695 NW_019167827.1 + View
Eutrema salsugineum Thhalv10013014m.g PF04057 - Replication factor-A protein 1, N-terminal domain (Rep-A_N) scaffold_2 + View
Eutrema salsugineum Thhalv10003822m.g KOG0851 - Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins scaffold_6 + View
Fragaria x ananassa FAN08G1674 PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT Fvb5-3 + View
Fragaria x ananassa FAN13G2002 PTHR23273//PTHR23273:SF4 - REPLICATION FACTOR A 1, RFA1 // REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT Fvb5-2 - View
Fragaria x ananassa FAN18G4284 PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT Fvb5-1 - View
Fragaria vesca FvH4_5g13771 PTHR23273//PTHR23273:SF4 - REPLICATION FACTOR A 1, RFA1 // REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT Fvb5 - View
Gossypium hirsutum Gohir.D03G096700 PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT D03 + View
Gossypium hirsutum Gohir.A03G070300 PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT A03 + View
Glycine max Glyma.17G078700 PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT Gm17 + View
Glycine max Glyma.05G020600 PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT Gm05 - View
Gossypium raimondii Gorai.003G101500 Chr03 + View
Lupinus albus Lalb_Chr12g0197221 PTHR23273//PTHR23273:SF4 - REPLICATION FACTOR A 1, RFA1 // REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT Lalb_Chr12 + View
Lupinus albus Lalb_Chr13g0302831 PTHR23273//PTHR23273:SF4 - REPLICATION FACTOR A 1, RFA1 // REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT Lalb_Chr13 - View
Lonicera japonica Lj9C471T8 GWHAAZE00000009 + View
Malus domestica MD14G1212400 RPA70-kDa subunit B Chr14 + View
Manihot esculenta Manes.06G084200 Chromosome06 - View
Medicago truncatula Medtr4g109580 replication protein A 70 kDa protein chr4 + View
Prunus persica Prupe.5G205700 PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT Pp05 + View
Phaseolus vulgaris Phvul.003G184400 PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT Chr03 - View
Quercus lobata QL10p019699 10 + View
Rosa chinensis RcHm_v2.0_Chr7g0183161 RcHm_v2.0_Chr7 + View
Sechium edule Sed0022878 LG08 + View
Sechium edule Sed0027547 LG12 + View
Solanum lycopersicum Solyc03g115050.3 Replication protein A subunit (AHRD V3.3 *** A0A1U8FVY4_CAPAN) SL4.0ch03 - View
Schrenkiella parvula Sp6g34920 KOG0851 - Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins ch6-6 - View
Schrenkiella parvula Sp2g24310 PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT ch2-4 - View
Solanum pennellii Sopen03g034120 Encodes a homolog of Replication Protein A. rpa70b mutants are hypersensitive to UV-B radiation and MMS treatments suggesting a role for this protein in DNA damage repair. | RPA70-kDa subunit B (RPA70B) | FUNCTIONS IN: DNA binding, nucleic acid binding | INVOLVED IN: DNA repair, response to UV-B, DNA replication | LOCATED IN: nucleus | EXPRESSED IN: 19 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Replication factor-a protein 1 Rpa1 , Nucleic acid-binding, OB-fold-like , Nucleic acid-binding, OB-fold , Nucleic acid binding, OB-fold, tRNA/helicase-type , Replication factor A, C-terminal , Replication factor-A protein 1, N-terminal | BEST Arabidopsis thaliana protein match is: Replication factor-A protein 1-related Spenn-ch03 - View
Selenicereus undatus Hund02583 Scaffold_33678 - View
Theobroma cacao Thecc.03G102500 Replication protein A 70 kDa DNA-binding subunit Chromosome_3 + View
Tarenaya hassleriana THA.LOC104819400 replication protein A 70 kDa DNA-binding subunit B-like NW_010966177.1 - View
Tarenaya hassleriana THA.LOC104804633 replication protein A 70 kDa DNA-binding subunit B NW_010960188.1 - View
Trifolium pratense TPR.G2021 Tp57577_TGAC_v2_LG5 - View
Vigna mungo VMungo1215G1142 CM024074.1 + View
Vitis vinifera GSVIVG01007849001 chr17 + View