Notice (8): Undefined variable: source_groups_information [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000824', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '721', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p33820' => 'bna', 'A01p33830' => 'bna', 'A01p33840' => 'bna', 'A02p29120' => 'bna', 'A03p03540' => 'bna', 'A03p46710' => 'bna', 'A03p51740' => 'bna', 'A07p06210' => 'bna', 'A09p07190' => 'bna', 'A09p21780' => 'bna', 'Aa31LG3G18510' => 'aar', 'Aa31LG6G1820' => 'aar', 'Aa31LG8G11780' => 'aar', 'Aa31LG9G7600' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2389' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.479' => 'aag', 'Actinidia01266' => 'ach', 'Actinidia04822' => 'ach', 'Actinidia16130' => 'ach', 'Actinidia16131' => 'ach', 'Actinidia16537' => 'ach', 'Actinidia32773' => 'ach', 'Actinidia39675' => 'ach', 'Ah.02g114080' => 'amhyb', 'Ah.07g201170' => 'amhyb', 'Ah.09g231350' => 'amhyb', 'Ah.11g047720' => 'amhyb', 'Ah.12g055800' => 'amhyb', 'AL1G45720' => 'aly', 'AL3G43800' => 'aly', 'AL6G18370' => 'aly', 'AL6G18410' => 'aly', 'AL6G19570' => 'aly', 'AL7G34960' => 'aly', 'AL8G37660' => 'aly', 'Aqoxy1G03346' => 'aox', 'Aqoxy3G02011' => 'aox', 'Aqoxy3G02012' => 'aox', 'Aqoxy3G02013' => 'aox', 'Aqoxy3G03684' => 'aox', 'Aqoxy4G01721' => 'aox', 'Aqoxy4G01813' => 'aox', 'Aqoxy6G02323' => 'aox', 'Aqoxy7G02240' => 'aox', 'Aqoxy7G04110' => 'aox', 'Aqoxy7G04112' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04BWFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71ADJA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79SD3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D7TWRW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3U0AR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J8WCL7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RQXR03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7GC2W' => 'arhy', 'AT2G06510' => 'ath', 'AT4G19130' => 'ath', 'AT5G08020' => 'ath', 'AT5G45400' => 'ath', 'AT5G61000' => 'ath', 'ATR0177G023' => 'atr', 'ATR0598G158' => 'atr', 'ATR0829G100' => 'atr', 'ATR0829G214' => 'atr', 'Atru.chr7.1669' => 'acertr', 'Atru.chr7.1670' => 'acertr', 'Atru.chr7.1671' => 'acertr', 'Atru.chr8.1429' => 'acertr', 'Atru.chr8.1430' => 'acertr', 'Atru.chr9.564' => 'acertr', 'AUR62007386' => 'cqu', 'AUR62008537' => 'cqu', 'AUR62018601' => 'cqu', 'AUR62021554' => 'cqu', 'AUR62025182' => 'cqu', 'AUR62028992' => 'cqu', 'BcaB01g05642' => 'bca', 'BcaB01g05683' => 'bca', 'BcaB02g09847' => 'bca', 'BcaB07g30456' => 'bca', 'BcaB07g30884' => 'bca', 'BcaB08g37297' => 'bca', 'BcaC04g21762' => 'bca', 'BcaC04g23467' => 'bca', 'BcaC05g24775' => 'bca', 'BcaC06g30610' => 'bca', 'BcaC06g32889' => 'bca', 'BcaC06g33184' => 'bca', 'BcaC06g35976' => 'bca', 'BcaC09g50885' => 'bca', 'BcaNung03077' => 'bca', 'BcaNung06900' => 'bca', 'BolC1t03820H' => 'bol', 'BolC2t10676H' => 'bol', 'BolC3t12936H' => 'bol', 'BolC5t29475H' => 'bol', 'BolC7t41345H' => 'bol', 'BolC7t44999H' => 'bol', 'BolC7t45528H' => 'bol', 'BolC7t45846H' => 'bol', 'BolC9t53717H' => 'bol', 'BolC9t55651H' => 'bol', 'BraA02t07945Z' => 'bra', 'BraA03t09704Z' => 'bra', 'BraA03t13794Z' => 'bra', 'BraA03t14263Z' => 'bra', 'BraA07t28419Z' => 'bra', 'BraA09t36368Z' => 'bra', 'BraA09t37781Z' => 'bra', 'C01p38580' => 'bna', 'C02p46200' => 'bna', 'C03p03990' => 'bna', 'C05p07210' => 'bna', 'C07p09270' => 'bna', 'C07p44760' => 'bna', 'C07p50260' => 'bna', 'C09p08030' => 'bna', 'C09p27880' => 'bna', 'CAN.G1228.20' => 'can', 'CAN.G1427.10' => 'can', 'CAN.G148.16' => 'can', 'CAN.G227.6' => 'can', 'CANSAT01G1154' => 'cansat', 'CANSAT54G1889' => 'cansat', 'CANSAT56G3947' => 'cansat', 'CANSAT80G1236' => 'cansat', 'CARHR103830' => 'chi', 'CARHR176670' => 'chi', 'CARHR205160' => 'chi', 'CARHR274710' => 'chi', 'Carub.0003s2727' => 'cru', 'Carub.0006s0691' => 'cru', 'Carub.0007s2202' => 'cru', 'Carub.0008s0271' => 'cru', 'Carub.0008s2169' => 'cru', 'Ca_13349_v3' => 'car', 'Ca_21769_v3' => 'car', 'Ca_21770_v3' => 'car', 'Ca_25103_v3' => 'car', 'CBR_g23266' => 'cbr', 'CBR_g36292' => 'cbr', 'CBR_g37119' => 'cbr', 'CBR_g55372' => 'cbr', 'Cc00_g07660' => 'ccan', 'Cc06_g11960' => 'ccan', 'Cc08_g05150' => 'ccan', 'CDE01G0675' => 'cde', 'CDE02G4126' => 'cde', 'CDE06G1892' => 'cde', 'CDE11G0897' => 'cde', 'CDE12G0883' => 'cde', 'Cfa003026' => 'cfa', 'Cfa012589' => 'cfa', 'Cfa019342' => 'cfa', 'Cfa025402' => 'cfa', 'Ciclev10000254m.g' => 'ccl', 'Ciclev10009939m.g' => 'ccl', 'Ciclev10010492m.g' => 'ccl', 'Ciclev10019317m.g' => 'ccl', 'CiPaw.03G209600' => 'cil', 'CiPaw.11G054100' => 'cil', 'CiPaw.11G103100' => 'cil', 'ClCG06G015600' => 'cla', 'ClCG10G001050' => 'cla', 'ClCG11G001530' => 'cla', 'COL.COLO4_06851' => 'col', 'COL.COLO4_14060' => 'col', 'COL.COLO4_18126' => 'col', 'COL.COLO4_32275' => 'col', 'Cpa.g.sc1086.1' => 'cpa', 'Cpa.g.sc137.10' => 'cpa', 'Cpa.g.sc137.11' => 'cpa', 'Cpa.g.sc28.78' => 'cpa', 'Cre16.g651000' => 'cre', 'Cre17.g718850' => 'cre', 'CsaV3_1G002970' => 'csa', 'CsaV3_2G001260' => 'csa', 'CsaV3_3G001070' => 'csa', 'CSS0005493' => 'camsi', 'CSS0007192' => 'camsi', 'CSS0009813' => 'camsi', 'CSS0020965' => 'camsi', 'CSS0031599' => 'camsi', 'CSS0032107' => 'camsi', 'CSS0033943' => 'camsi', 'CSS0043196' => 'camsi', 'DCAR_004240' => 'dca', 'DCAR_011568' => 'dca', 'DCAR_011569' => 'dca', 'DCAR_023168' => 'dca', 'DCAR_028290' => 'dca', 'Dinv06490' => 'din', 'Dinv08250' => 'din', 'Dinv08482' => 'din', 'Dinv10520' => 'din', 'Dinv17419' => 'din', 'Dinv19531' => 'din', 'Dinv22755' => 'din', 'Dinv22775' => 'din', 'Dinv22867' => 'din', 'Dinv26272' => 'din', 'Dinv26739' => 'din', 'Dinv28015' => 'din', 'Dinv30925' => 'din', 'Dinv41987' => 'din', 'Dinv42372' => 'din', 'Duzib084G0695' => 'dzi', 'Duzib168G1443' => 'dzi', 'Duzib205G0152' => 'dzi', 'Duzib205G1830' => 'dzi', 'ECA240G2629' => 'eca', 'ECA240G4292' => 'eca', 'ECA246G1424' => 'eca', 'ECA246G1912' => 'eca', 'ECA246G2513' => 'eca', 'ECA246G3369' => 'eca', 'ECA247G3309' => 'eca', 'EL10Ac5g11138' => 'bvu', 'EL10Ac5g11968' => 'bvu', 'EL10Ac8g19115' => 'bvu', 'Eucgr.B00599' => 'egr', 'Eucgr.B00601' => 'egr', 'Eucgr.C03561' => 'egr', 'Eucgr.D02593' => 'egr', 'FAN04G2448' => 'fan', 'FAN08G1674' => 'fan', 'FAN08G2719' => 'fan', 'FAN13G0731' => 'fan', 'FAN13G2002' => 'fan', 'FAN18G2954' => 'fan', 'FAN18G3561' => 'fan', 'FAN18G4284' => 'fan', 'FAN19G2973' => 'fan', 'FAN23G0408' => 'fan', 'FAN26G2759' => 'fan', 'FAN26G2843' => 'fan', 'FvH4_1g08261' => 'fve', 'FvH4_5g13771' => 'fve', 'FvH4_5g23941' => 'fve', 'Glyma.05G020600' => 'gma', 'Glyma.09G213300' => 'gma', 'Glyma.09G213500' => 'gma', 'Glyma.15G174100' => 'gma', 'Glyma.17G078700' => 'gma', 'Gohir.A03G070300' => 'ghi', 'Gohir.A12G202700' => 'ghi', 'Gohir.A13G191600' => 'ghi', 'Gohir.D03G096700' => 'ghi', 'Gohir.D12G205400' => 'ghi', 'Gohir.D13G197000' => 'ghi', 'Gorai.003G101500' => 'gra', 'Gorai.008G220300' => 'gra', 'Gorai.013G225700' => 'gra', 'GSVIVG01002032001' => 'vvi', 'GSVIVG01007849001' => 'vvi', 'GSVIVG01014617001' => 'vvi', 'GSVIVG01014619001' => 'vvi', 'GSVIVG01015111001' => 'vvi', 'GSVIVG01020590001' => 'vvi', 'GSVIVG01022784001' => 'vvi', 'GSVIVG01023662001' => 'vvi', 'GSVIVG01023663001' => 'vvi', 'GSVIVG01032319001' => 'vvi', 'GSVIVG01032320001' => 'vvi', 'GSVIVG01035135001' => 'vvi', 'GSVIVG01037062001' => 'vvi', 'GSVIVG01037063001' => 'vvi', 'HanXRQChr02g0044771' => 'han', 'HanXRQChr03g0081181' => 'han', 'HanXRQChr10g0300431' => 'han', 'HanXRQChr10g0300451' => 'han', 'HanXRQChr10g0319611' => 'han', 'HanXRQChr16g0517661' => 'han', 'HanXRQChr17g0539191' => 'han', 'Haze_07734' => 'cav', 'Haze_08068' => 'cav', 'Haze_25975' => 'cav', 'Hma1.2p1_0060F.1_g033050' => 'hma', 'Hma1.2p1_0544F.1_g175470' => 'hma', 'HPP92_012596' => 'vpl', 'HPP92_014050' => 'vpl', 'HPP92_014304' => 'vpl', 'HPP92_019327' => 'vpl', 'Hund02583' => 'sun', 'Hund09917' => 'sun', 'Hund11146' => 'sun', 'Hund26003' => 'sun', 'Lalb_Chr08g0232511' => 'lal', 'Lalb_Chr12g0197221' => 'lal', 'Lalb_Chr13g0302831' => 'lal', 'Lalb_Chr16g0380751' => 'lal', 'Lj2g0016644' => 'lja', 'Lj2g0019271' => 'lja', 'Lj4A909T87' => 'lonja', 'Lj4C905G6' => 'lonja', 'Lj4C909T19' => 'lonja', 'Lj4g0011361' => 'lja', 'Lj4g0021262' => 'lja', 'Lj5A102T96' => 'lonja', 'Lj6g0016995' => 'lja', 'Lj8C334G12' => 'lonja', 'Lj9C471T8' => 'lonja', 'Lsat_1_v5_gn_1_14461' => 'lsa', 'Lsat_1_v5_gn_3_26741' => 'lsa', 'Lsat_1_v5_gn_3_26761' => 'lsa', 'Lsat_1_v5_gn_5_141780' => 'lsa', 'Lsat_1_v5_gn_5_58221' => 'lsa', 'Lsat_1_v5_gn_5_58641' => 'lsa', 'Manes.03G038600' => 'mes', 'Manes.06G084200' => 'mes', 'Manes.17G003800' => 'mes', 'Manes.17G004337' => 'mes', 'Mapoly0109s0044' => 'mpo', 'Mapoly0125s0021' => 'mpo', 'MBI04_g27279_MAGBIO' => 'mbi', 'MBI07_g08573_MAGBIO' => 'mbi', 'MBI07_g46481_MAGBIO' => 'mbi', 'MBI11_g43227_MAGBIO' => 'mbi', 'MBI13_g21846_MAGBIO' => 'mbi', 'MBI17_g04594_MAGBIO' => 'mbi', 'MBI19_g11847_MAGBIO' => 'mbi', 'MCO07G139' => 'mco', 'MCO09G242' => 'mco', 'MD00G1001700' => 'mdo', 'MD02G1087200' => 'mdo', 'MD06G1015200' => 'mdo', 'MD06G1225500' => 'mdo', 'MD14G1212400' => 'mdo', 'MD15G1214800' => 'mdo', 'Medtr1g095050' => 'mtr', 'Medtr2g041270' => 'mtr', 'Medtr3g047950' => 'mtr', 'Medtr4g064240' => 'mtr', 'Medtr4g109580' => 'mtr', 'Medtr4g109590' => 'mtr', 'Medtr5g026880' => 'mtr', 'Medtr5g048670' => 'mtr', 'MELO3C004643.2' => 'cme', 'MELO3C013797.2' => 'cme', 'MELO3C017228.2' => 'cme', 'Migut.A00558' => 'egut', 'Migut.I00367' => 'egut', 'Migut.J00947' => 'egut', 'MSTRG.11337' => 'ama', 'MSTRG.22957' => 'ama', 'MSTRG.25728' => 'ama', 'Nitab4.5_0000024g0120' => 'nta', 'Nitab4.5_0000108g0410' => 'nta', 'Nitab4.5_0001485g0110' => 'nta', 'Nitab4.5_0003992g0030' => 'nta', 'Nitab4.5_0006563g0010' => 'nta', 'Nitab4.5_0009401g0060' => 'nta', 'Nn1g02070' => 'nnu', 'Nn3g17458' => 'nnu', 'Nn4g23436' => 'nnu', 'Nn5g28104' => 'nnu', 'Nn8g38709' => 'nnu', 'Nn8g40648' => 'nnu', 'Oeu017324.1' => 'oeu', 'Oeu042211.1' => 'oeu', 'Oeu044875.1' => 'oeu', 'Oeu061166.1' => 'oeu', 'Os02g0776800' => 'osa', 'Os03g0214100' => 'osa', 'Os05g0111000' => 'osa', 'Peaxi162Scf00201g00330' => 'pax', 'Peaxi162Scf00408g00837' => 'pax', 'Peaxi162Scf00724g00059' => 'pax', 'PGR031G2041' => 'pgr', 'PGR031G3208' => 'pgr', 'PGR044G0832' => 'pgr', 'PGR083G2843' => 'pgr', 'PGSC0003DMG400024634' => 'stu', 'PGSC0003DMG400030860' => 'stu', 'PGSC0003DMG400044420' => 'stu', 'Phvul.002G128800' => 'pvu', 'Phvul.003G184400' => 'pvu', 'Phvul.009G228500' => 'pvu', 'Potri.003G102700' => 'ptr', 'Potri.015G057300' => 'ptr', 'Potri.018G065300' => 'ptr', 'Pp3c1_20770' => 'ppa', 'Pp3c20_10450' => 'ppa', 'Pp3c23_16880' => 'ppa', 'PRCOL_00003597' => 'pco', 'Prupe.5G020900' => 'ppe', 'Prupe.5G205700' => 'ppe', 'Prupe.7G202500' => 'ppe', 'Psat1g132720' => 'psa', 'Psat2g142080' => 'psa', 'Psat4g047800' => 'psa', 'PSO017G4603' => 'pso', 'PSO063G1428' => 'pso', 'PSO063G2170' => 'pso', 'PSO063G2983' => 'pso', 'PSO063G4795' => 'pso', 'PSO210G0233' => 'pso', 'PSO210G5735' => 'pso', 'PSO478G2603' => 'pso', 'PSO731G0068' => 'pso', 'PSO782G4142' => 'pso', 'QL02p061033' => 'qlo', 'QL10p019699' => 'qlo', 'QL12p000754' => 'qlo', 'QL12p000778' => 'qlo', 'RcHm_v2.0_Chr2g0094351' => 'rch', 'RcHm_v2.0_Chr2g0106871' => 'rch', 'RcHm_v2.0_Chr4g0402291' => 'rch', 'RcHm_v2.0_Chr5g0032071' => 'rch', 'RcHm_v2.0_Chr5g0038981' => 'rch', 'RcHm_v2.0_Chr7g0183161' => 'rch', 'RcHm_v2.0_Chr7g0207931' => 'rch', 'RcHm_v2.0_Chr7g0213381' => 'rch', 'Rhsim05G0012100' => 'rsi', 'Rhsim05G0012200' => 'rsi', 'Rhsim05G0012300' => 'rsi', 'Rhsim08G0145600' => 'rsi', 'Rhsim11G0025300' => 'rsi', 'Rhsim11G0025400' => 'rsi', 'RhsimUnG0172500' => 'rsi', 'Sabra03G0069900' => 'sbr', 'Sabra06G0112600' => 'sbr', 'Sabra06G0113900' => 'sbr', 'Sabra15G0082600' => 'sbr', 'Sabra15G0083000' => 'sbr', 'Sabra18G0057900' => 'sbr', 'Sc01g0007020' => 'sci', 'Sc04g0004360' => 'sci', 'Sc19g0001900' => 'sci', 'Sed0000920' => 'sed', 'Sed0015067' => 'sed', 'Sed0022878' => 'sed', 'Sed0027547' => 'sed', 'SEGI_00003' => 'sgi', 'SEGI_00361' => 'sgi', 'SEGI_00679' => 'sgi', 'SEGI_00714' => 'sgi', 'SEGI_01198' => 'sgi', 'SEGI_01245' => 'sgi', 'SEGI_01360' => 'sgi', 'SEGI_01683' => 'sgi', 'SEGI_01959' => 'sgi', 'SEGI_02614' => 'sgi', 'SEGI_02685' => 'sgi', 'SEGI_02882' => 'sgi', 'SEGI_02899' => 'sgi', 'SEGI_03718' => 'sgi', 'SEGI_04497' => 'sgi', 'SEGI_04520' => 'sgi', 'SEGI_04795' => 'sgi', 'SEGI_05071' => 'sgi', 'SEGI_05176' => 'sgi', 'SEGI_05651' => 'sgi', 'SEGI_05771' => 'sgi', 'SEGI_06287' => 'sgi', 'SEGI_06336' => 'sgi', 'SEGI_06573' => 'sgi', 'SEGI_06635' => 'sgi', 'SEGI_06941' => 'sgi', 'SEGI_07067' => 'sgi', 'SEGI_07193' => 'sgi', 'SEGI_08053' => 'sgi', 'SEGI_08060' => 'sgi', 'SEGI_08111' => 'sgi', 'SEGI_08146' => 'sgi', 'SEGI_08283' => 'sgi', 'SEGI_08943' => 'sgi', 'SEGI_09316' => 'sgi', 'SEGI_09631' => 'sgi', 'SEGI_09636' => 'sgi', 'SEGI_09821' => 'sgi', 'SEGI_09861' => 'sgi', 'SEGI_09929' => 'sgi', 'SEGI_10600' => 'sgi', 'SEGI_11169' => 'sgi', 'SEGI_11783' => 'sgi', 'SEGI_11933' => 'sgi', 'SEGI_12188' => 'sgi', 'SEGI_12360' => 'sgi', 'SEGI_12473' => 'sgi', 'SEGI_13329' => 'sgi', 'SEGI_13680' => 'sgi', 'SEGI_13841' => 'sgi', 'SEGI_13896' => 'sgi', 'SEGI_14062' => 'sgi', 'SEGI_14230' => 'sgi', 'SEGI_14260' => 'sgi', 'SEGI_14935' => 'sgi', 'SEGI_14940' => 'sgi', 'SEGI_15192' => 'sgi', 'SEGI_15535' => 'sgi', 'SEGI_15741' => 'sgi', 'SEGI_16125' => 'sgi', 'SEGI_16242' => 'sgi', 'SEGI_16358' => 'sgi', 'SEGI_16500' => 'sgi', 'SEGI_16551' => 'sgi', 'SEGI_16615' => 'sgi', 'SEGI_16686' => 'sgi', 'SEGI_16695' => 'sgi', 'SEGI_17357' => 'sgi', 'SEGI_17394' => 'sgi', 'SEGI_17447' => 'sgi', 'SEGI_17936' => 'sgi', 'SEGI_17969' => 'sgi', 'SEGI_18072' => 'sgi', 'SEGI_18457' => 'sgi', 'SEGI_18576' => 'sgi', 'SEGI_18847' => 'sgi', 'SEGI_18898' => 'sgi', 'SEGI_19719' => 'sgi', 'SEGI_19975' => 'sgi', 'SEGI_20150' => 'sgi', 'SEGI_20194' => 'sgi', 'SEGI_20228' => 'sgi', 'SEGI_20289' => 'sgi', 'SEGI_20391' => 'sgi', 'SEGI_20626' => 'sgi', 'SEGI_20679' => 'sgi', 'SEGI_20798' => 'sgi', 'SEGI_21076' => 'sgi', 'SEGI_21469' => 'sgi', 'SEGI_21480' => 'sgi', 'SEGI_21533' => 'sgi', 'SEGI_21607' => 'sgi', 'SEGI_21687' => 'sgi', 'SEGI_21743' => 'sgi', 'SEGI_21806' => 'sgi', 'SEGI_22147' => 'sgi', 'SEGI_22182' => 'sgi', 'SEGI_22206' => 'sgi', 'SEGI_22436' => 'sgi', 'SEGI_22572' => 'sgi', 'SEGI_22792' => 'sgi', 'SEGI_23016' => 'sgi', 'SEGI_23133' => 'sgi', 'SEGI_23378' => 'sgi', 'SEGI_23554' => 'sgi', 'SEGI_23604' => 'sgi', 'SEGI_23854' => 'sgi', 'SEGI_23982' => 'sgi', 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'SGA_v2.0_scaffold89G27397' => 'sas', 'SGA_v2.0_scaffold91G28086' => 'sas', 'SGA_v2.0_scaffold96G29068' => 'sas', 'SGA_v2.0_scaffold96G29069' => 'sas', 'SHI07207' => 'shi', 'SHI27089' => 'shi', 'SHI27090' => 'shi', 'SMO026G0001' => 'smo', 'SMO062G0004' => 'smo', 'SMO109G0004' => 'smo', 'SMO112G0064' => 'smo', 'SMO115G0028' => 'smo', 'SMO116G0284' => 'smo', 'SMO119G0217' => 'smo', 'SMO122G0012' => 'smo', 'SMO134G0024' => 'smo', 'SMO137G0045' => 'smo', 'SMO146G0099' => 'smo', 'SMO159G0007' => 'smo', 'SMO169G0286' => 'smo', 'SMO174G0100' => 'smo', 'SMO183G0002' => 'smo', 'SMO202G0046' => 'smo', 'SMO274G0007' => 'smo', 'SMO286G0019' => 'smo', 'SMO320G0001' => 'smo', 'SMO321G0001' => 'smo', 'SMO342G0003' => 'smo', 'SMO354G0006' => 'smo', 'SMO358G0534' => 'smo', 'SMO360G0011' => 'smo', 'SMO364G0527' => 'smo', 'SMO364G0729' => 'smo', 'SMO367G1049' => 'smo', 'Solyc03g115050.3' => 'sly', 'Solyc05g025590.4' => 'sly', 'Solyc08g075840.3' => 'sly', 'Sopen03g034120' => 'spe', 'Sopen05g020190' => 'spe', 'Sopen08g024480' => 'spe', 'Sp2g10350' => 'spa', 'Sp2g24310' => 'spa', 'Sp3g24710' => 'spa', 'Sp6g34920' => 'spa', 'Sp7g17830' => 'spa', 'TAR063G0004' => 'tar', 'TAR091G0002' => 'tar', 'TAR371G0114' => 'tar', 'TAR371G0671' => 'tar', 'TAR374G1226' => 'tar', 'TAR375G1100' => 'tar', 'TAR622G0908' => 'tar', 'TAR624G0651' => 'tar', 'TAR625G0518' => 'tar', 'TAR629G0759' => 'tar', 'TAR629G1891' => 'tar', 'THA.LOC104804633' => 'tha', 'THA.LOC104806192' => 'tha', 'THA.LOC104819400' => 'tha', 'THA.LOC104826582' => 'tha', 'Thecc.03G102500' => 'tca', 'Thecc.03G317500' => 'tca', 'Thecc.09G080300' => 'tca', 'Thecc.09G080500' => 'tca', 'Thhalv10000781m.g' => 'esa', 'Thhalv10001929m.g' => 'esa', 'Thhalv10003822m.g' => 'esa', 'Thhalv10013014m.g' => 'esa', 'Thhalv10024555m.g' => 'esa', 'TPR.G10916' => 'tpr', 'TPR.G15686' => 'tpr', 'TPR.G17277' => 'tpr', 'TPR.G20024' => 'tpr', 'TPR.G2021' => 'tpr', 'TPR.G29493' => 'tpr', 'TWI34G1166' => 'twi', 'TWI36G1694' => 'twi', 'TWI56G1436' => 'twi', 'TWI81G1098' => 'twi', 'unitig_22.g5102' => 'ugi', 'unitig_62.g23555' => 'ugi', 'vmacro00064' => 'vma', 'vmacro17144' => 'vma', 'vmacro17181' => 'vma', 'vmacro17211' => 'vma', 'vmacro17614' => 'vma', 'vmacro19552' => 'vma', 'vmacro19553' => 'vma', 'VMungo0720G0183' => 'vmu', 'VMungo1215G0840' => 'vmu', 'VMungo1215G1142' => 'vmu', 'VMungo1309G1355' => 'vmu', 'Zm00001eb008630' => 'zma', 'Zm00001eb193190' => 'zma', 'Zm00001eb266890' => 'zma', 'Zm00001eb282530' => 'zma', 'Zm00001eb400180' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D000824', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000824' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D000824', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '721', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000824' ) ), 'genes' => array( 'A01p33820' => 'bna', 'A01p33830' => 'bna', 'A01p33840' => 'bna', 'A02p29120' => 'bna', 'A03p03540' => 'bna', 'A03p46710' => 'bna', 'A03p51740' => 'bna', 'A07p06210' => 'bna', 'A09p07190' => 'bna', 'A09p21780' => 'bna', 'Aa31LG3G18510' => 'aar', 'Aa31LG6G1820' => 'aar', 'Aa31LG8G11780' => 'aar', 'Aa31LG9G7600' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2389' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.479' => 'aag', 'Actinidia01266' => 'ach', 'Actinidia04822' => 'ach', 'Actinidia16130' => 'ach', 'Actinidia16131' => 'ach', 'Actinidia16537' => 'ach', 'Actinidia32773' => 'ach', 'Actinidia39675' => 'ach', 'Ah.02g114080' => 'amhyb', 'Ah.07g201170' => 'amhyb', 'Ah.09g231350' => 'amhyb', 'Ah.11g047720' => 'amhyb', 'Ah.12g055800' => 'amhyb', 'AL1G45720' => 'aly', 'AL3G43800' => 'aly', 'AL6G18370' => 'aly', 'AL6G18410' => 'aly', 'AL6G19570' => 'aly', 'AL7G34960' => 'aly', 'AL8G37660' => 'aly', 'Aqoxy1G03346' => 'aox', 'Aqoxy3G02011' => 'aox', 'Aqoxy3G02012' => 'aox', 'Aqoxy3G02013' => 'aox', 'Aqoxy3G03684' => 'aox', 'Aqoxy4G01721' => 'aox', 'Aqoxy4G01813' => 'aox', 'Aqoxy6G02323' => 'aox', 'Aqoxy7G02240' => 'aox', 'Aqoxy7G04110' => 'aox', 'Aqoxy7G04112' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04BWFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71ADJA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79SD3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D7TWRW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3U0AR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J8WCL7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RQXR03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7GC2W' => 'arhy', 'AT2G06510' => 'ath', 'AT4G19130' => 'ath', 'AT5G08020' => 'ath', 'AT5G45400' => 'ath', 'AT5G61000' => 'ath', 'ATR0177G023' => 'atr', 'ATR0598G158' => 'atr', 'ATR0829G100' => 'atr', 'ATR0829G214' => 'atr', 'Atru.chr7.1669' => 'acertr', 'Atru.chr7.1670' => 'acertr', 'Atru.chr7.1671' => 'acertr', 'Atru.chr8.1429' => 'acertr', 'Atru.chr8.1430' => 'acertr', 'Atru.chr9.564' => 'acertr', 'AUR62007386' => 'cqu', 'AUR62008537' => 'cqu', 'AUR62018601' => 'cqu', 'AUR62021554' => 'cqu', 'AUR62025182' => 'cqu', 'AUR62028992' => 'cqu', 'BcaB01g05642' => 'bca', 'BcaB01g05683' => 'bca', 'BcaB02g09847' => 'bca', 'BcaB07g30456' => 'bca', 'BcaB07g30884' => 'bca', 'BcaB08g37297' => 'bca', 'BcaC04g21762' => 'bca', 'BcaC04g23467' => 'bca', 'BcaC05g24775' => 'bca', 'BcaC06g30610' => 'bca', 'BcaC06g32889' => 'bca', 'BcaC06g33184' => 'bca', 'BcaC06g35976' => 'bca', 'BcaC09g50885' => 'bca', 'BcaNung03077' => 'bca', 'BcaNung06900' => 'bca', 'BolC1t03820H' => 'bol', 'BolC2t10676H' => 'bol', 'BolC3t12936H' => 'bol', 'BolC5t29475H' => 'bol', 'BolC7t41345H' => 'bol', 'BolC7t44999H' => 'bol', 'BolC7t45528H' => 'bol', 'BolC7t45846H' => 'bol', 'BolC9t53717H' => 'bol', 'BolC9t55651H' => 'bol', 'BraA02t07945Z' => 'bra', 'BraA03t09704Z' => 'bra', 'BraA03t13794Z' => 'bra', 'BraA03t14263Z' => 'bra', 'BraA07t28419Z' => 'bra', 'BraA09t36368Z' => 'bra', 'BraA09t37781Z' => 'bra', 'C01p38580' => 'bna', 'C02p46200' => 'bna', 'C03p03990' => 'bna', 'C05p07210' => 'bna', 'C07p09270' => 'bna', 'C07p44760' => 'bna', 'C07p50260' => 'bna', 'C09p08030' => 'bna', 'C09p27880' => 'bna', 'CAN.G1228.20' => 'can', 'CAN.G1427.10' => 'can', 'CAN.G148.16' => 'can', 'CAN.G227.6' => 'can', 'CANSAT01G1154' => 'cansat', 'CANSAT54G1889' => 'cansat', 'CANSAT56G3947' => 'cansat', 'CANSAT80G1236' => 'cansat', 'CARHR103830' => 'chi', 'CARHR176670' => 'chi', 'CARHR205160' => 'chi', 'CARHR274710' => 'chi', 'Carub.0003s2727' => 'cru', 'Carub.0006s0691' => 'cru', 'Carub.0007s2202' => 'cru', 'Carub.0008s0271' => 'cru', 'Carub.0008s2169' => 'cru', 'Ca_13349_v3' => 'car', 'Ca_21769_v3' => 'car', 'Ca_21770_v3' => 'car', 'Ca_25103_v3' => 'car', 'CBR_g23266' => 'cbr', 'CBR_g36292' => 'cbr', 'CBR_g37119' => 'cbr', 'CBR_g55372' => 'cbr', 'Cc00_g07660' => 'ccan', 'Cc06_g11960' => 'ccan', 'Cc08_g05150' => 'ccan', 'CDE01G0675' => 'cde', 'CDE02G4126' => 'cde', 'CDE06G1892' => 'cde', 'CDE11G0897' => 'cde', 'CDE12G0883' => 'cde', 'Cfa003026' => 'cfa', 'Cfa012589' => 'cfa', 'Cfa019342' => 'cfa', 'Cfa025402' => 'cfa', 'Ciclev10000254m.g' => 'ccl', 'Ciclev10009939m.g' => 'ccl', 'Ciclev10010492m.g' => 'ccl', 'Ciclev10019317m.g' => 'ccl', 'CiPaw.03G209600' => 'cil', 'CiPaw.11G054100' => 'cil', 'CiPaw.11G103100' => 'cil', 'ClCG06G015600' => 'cla', 'ClCG10G001050' => 'cla', 'ClCG11G001530' => 'cla', 'COL.COLO4_06851' => 'col', 'COL.COLO4_14060' => 'col', 'COL.COLO4_18126' => 'col', 'COL.COLO4_32275' => 'col', 'Cpa.g.sc1086.1' => 'cpa', 'Cpa.g.sc137.10' => 'cpa', 'Cpa.g.sc137.11' => 'cpa', 'Cpa.g.sc28.78' => 'cpa', 'Cre16.g651000' => 'cre', 'Cre17.g718850' => 'cre', 'CsaV3_1G002970' => 'csa', 'CsaV3_2G001260' => 'csa', 'CsaV3_3G001070' => 'csa', 'CSS0005493' => 'camsi', 'CSS0007192' => 'camsi', 'CSS0009813' => 'camsi', 'CSS0020965' => 'camsi', 'CSS0031599' => 'camsi', 'CSS0032107' => 'camsi', 'CSS0033943' => 'camsi', 'CSS0043196' => 'camsi', 'DCAR_004240' => 'dca', 'DCAR_011568' => 'dca', 'DCAR_011569' => 'dca', 'DCAR_023168' => 'dca', 'DCAR_028290' => 'dca', 'Dinv06490' => 'din', 'Dinv08250' => 'din', 'Dinv08482' => 'din', 'Dinv10520' => 'din', 'Dinv17419' => 'din', 'Dinv19531' => 'din', 'Dinv22755' => 'din', 'Dinv22775' => 'din', 'Dinv22867' => 'din', 'Dinv26272' => 'din', 'Dinv26739' => 'din', 'Dinv28015' => 'din', 'Dinv30925' => 'din', 'Dinv41987' => 'din', 'Dinv42372' => 'din', 'Duzib084G0695' => 'dzi', 'Duzib168G1443' => 'dzi', 'Duzib205G0152' => 'dzi', 'Duzib205G1830' => 'dzi', 'ECA240G2629' => 'eca', 'ECA240G4292' => 'eca', 'ECA246G1424' => 'eca', 'ECA246G1912' => 'eca', 'ECA246G2513' => 'eca', 'ECA246G3369' => 'eca', 'ECA247G3309' => 'eca', 'EL10Ac5g11138' => 'bvu', 'EL10Ac5g11968' => 'bvu', 'EL10Ac8g19115' => 'bvu', 'Eucgr.B00599' => 'egr', 'Eucgr.B00601' => 'egr', 'Eucgr.C03561' => 'egr', 'Eucgr.D02593' => 'egr', 'FAN04G2448' => 'fan', 'FAN08G1674' => 'fan', 'FAN08G2719' => 'fan', 'FAN13G0731' => 'fan', 'FAN13G2002' => 'fan', 'FAN18G2954' => 'fan', 'FAN18G3561' => 'fan', 'FAN18G4284' => 'fan', 'FAN19G2973' => 'fan', 'FAN23G0408' => 'fan', 'FAN26G2759' => 'fan', 'FAN26G2843' => 'fan', 'FvH4_1g08261' => 'fve', 'FvH4_5g13771' => 'fve', 'FvH4_5g23941' => 'fve', 'Glyma.05G020600' => 'gma', 'Glyma.09G213300' => 'gma', 'Glyma.09G213500' => 'gma', 'Glyma.15G174100' => 'gma', 'Glyma.17G078700' => 'gma', 'Gohir.A03G070300' => 'ghi', 'Gohir.A12G202700' => 'ghi', 'Gohir.A13G191600' => 'ghi', 'Gohir.D03G096700' => 'ghi', 'Gohir.D12G205400' => 'ghi', 'Gohir.D13G197000' => 'ghi', 'Gorai.003G101500' => 'gra', 'Gorai.008G220300' => 'gra', 'Gorai.013G225700' => 'gra', 'GSVIVG01002032001' => 'vvi', 'GSVIVG01007849001' => 'vvi', 'GSVIVG01014617001' => 'vvi', 'GSVIVG01014619001' => 'vvi', 'GSVIVG01015111001' => 'vvi', 'GSVIVG01020590001' => 'vvi', 'GSVIVG01022784001' => 'vvi', 'GSVIVG01023662001' => 'vvi', 'GSVIVG01023663001' => 'vvi', 'GSVIVG01032319001' => 'vvi', 'GSVIVG01032320001' => 'vvi', 'GSVIVG01035135001' => 'vvi', 'GSVIVG01037062001' => 'vvi', 'GSVIVG01037063001' => 'vvi', 'HanXRQChr02g0044771' => 'han', 'HanXRQChr03g0081181' => 'han', 'HanXRQChr10g0300431' => 'han', 'HanXRQChr10g0300451' => 'han', 'HanXRQChr10g0319611' => 'han', 'HanXRQChr16g0517661' => 'han', 'HanXRQChr17g0539191' => 'han', 'Haze_07734' => 'cav', 'Haze_08068' => 'cav', 'Haze_25975' => 'cav', 'Hma1.2p1_0060F.1_g033050' => 'hma', 'Hma1.2p1_0544F.1_g175470' => 'hma', 'HPP92_012596' => 'vpl', 'HPP92_014050' => 'vpl', 'HPP92_014304' => 'vpl', 'HPP92_019327' => 'vpl', 'Hund02583' => 'sun', 'Hund09917' => 'sun', 'Hund11146' => 'sun', 'Hund26003' => 'sun', 'Lalb_Chr08g0232511' => 'lal', 'Lalb_Chr12g0197221' => 'lal', 'Lalb_Chr13g0302831' => 'lal', 'Lalb_Chr16g0380751' => 'lal', 'Lj2g0016644' => 'lja', 'Lj2g0019271' => 'lja', 'Lj4A909T87' => 'lonja', 'Lj4C905G6' => 'lonja', 'Lj4C909T19' => 'lonja', 'Lj4g0011361' => 'lja', 'Lj4g0021262' => 'lja', 'Lj5A102T96' => 'lonja', 'Lj6g0016995' => 'lja', 'Lj8C334G12' => 'lonja', 'Lj9C471T8' => 'lonja', 'Lsat_1_v5_gn_1_14461' => 'lsa', 'Lsat_1_v5_gn_3_26741' => 'lsa', 'Lsat_1_v5_gn_3_26761' => 'lsa', 'Lsat_1_v5_gn_5_141780' => 'lsa', 'Lsat_1_v5_gn_5_58221' => 'lsa', 'Lsat_1_v5_gn_5_58641' => 'lsa', 'Manes.03G038600' => 'mes', 'Manes.06G084200' => 'mes', 'Manes.17G003800' => 'mes', 'Manes.17G004337' => 'mes', 'Mapoly0109s0044' => 'mpo', 'Mapoly0125s0021' => 'mpo', 'MBI04_g27279_MAGBIO' => 'mbi', 'MBI07_g08573_MAGBIO' => 'mbi', 'MBI07_g46481_MAGBIO' => 'mbi', 'MBI11_g43227_MAGBIO' => 'mbi', 'MBI13_g21846_MAGBIO' => 'mbi', 'MBI17_g04594_MAGBIO' => 'mbi', 'MBI19_g11847_MAGBIO' => 'mbi', 'MCO07G139' => 'mco', 'MCO09G242' => 'mco', 'MD00G1001700' => 'mdo', 'MD02G1087200' => 'mdo', 'MD06G1015200' => 'mdo', 'MD06G1225500' => 'mdo', 'MD14G1212400' => 'mdo', 'MD15G1214800' => 'mdo', 'Medtr1g095050' => 'mtr', 'Medtr2g041270' => 'mtr', 'Medtr3g047950' => 'mtr', 'Medtr4g064240' => 'mtr', 'Medtr4g109580' => 'mtr', 'Medtr4g109590' => 'mtr', 'Medtr5g026880' => 'mtr', 'Medtr5g048670' => 'mtr', 'MELO3C004643.2' => 'cme', 'MELO3C013797.2' => 'cme', 'MELO3C017228.2' => 'cme', 'Migut.A00558' => 'egut', 'Migut.I00367' => 'egut', 'Migut.J00947' => 'egut', 'MSTRG.11337' => 'ama', 'MSTRG.22957' => 'ama', 'MSTRG.25728' => 'ama', 'Nitab4.5_0000024g0120' => 'nta', 'Nitab4.5_0000108g0410' => 'nta', 'Nitab4.5_0001485g0110' => 'nta', 'Nitab4.5_0003992g0030' => 'nta', 'Nitab4.5_0006563g0010' => 'nta', 'Nitab4.5_0009401g0060' => 'nta', 'Nn1g02070' => 'nnu', 'Nn3g17458' => 'nnu', 'Nn4g23436' => 'nnu', 'Nn5g28104' => 'nnu', 'Nn8g38709' => 'nnu', 'Nn8g40648' => 'nnu', 'Oeu017324.1' => 'oeu', 'Oeu042211.1' => 'oeu', 'Oeu044875.1' => 'oeu', 'Oeu061166.1' => 'oeu', 'Os02g0776800' => 'osa', 'Os03g0214100' => 'osa', 'Os05g0111000' => 'osa', 'Peaxi162Scf00201g00330' => 'pax', 'Peaxi162Scf00408g00837' => 'pax', 'Peaxi162Scf00724g00059' => 'pax', 'PGR031G2041' => 'pgr', 'PGR031G3208' => 'pgr', 'PGR044G0832' => 'pgr', 'PGR083G2843' => 'pgr', 'PGSC0003DMG400024634' => 'stu', 'PGSC0003DMG400030860' => 'stu', 'PGSC0003DMG400044420' => 'stu', 'Phvul.002G128800' => 'pvu', 'Phvul.003G184400' => 'pvu', 'Phvul.009G228500' => 'pvu', 'Potri.003G102700' => 'ptr', 'Potri.015G057300' => 'ptr', 'Potri.018G065300' => 'ptr', 'Pp3c1_20770' => 'ppa', 'Pp3c20_10450' => 'ppa', 'Pp3c23_16880' => 'ppa', 'PRCOL_00003597' => 'pco', 'Prupe.5G020900' => 'ppe', 'Prupe.5G205700' => 'ppe', 'Prupe.7G202500' => 'ppe', 'Psat1g132720' => 'psa', 'Psat2g142080' => 'psa', 'Psat4g047800' => 'psa', 'PSO017G4603' => 'pso', 'PSO063G1428' => 'pso', 'PSO063G2170' => 'pso', 'PSO063G2983' => 'pso', 'PSO063G4795' => 'pso', 'PSO210G0233' => 'pso', 'PSO210G5735' => 'pso', 'PSO478G2603' => 'pso', 'PSO731G0068' => 'pso', 'PSO782G4142' => 'pso', 'QL02p061033' => 'qlo', 'QL10p019699' => 'qlo', 'QL12p000754' => 'qlo', 'QL12p000778' => 'qlo', 'RcHm_v2.0_Chr2g0094351' => 'rch', 'RcHm_v2.0_Chr2g0106871' => 'rch', 'RcHm_v2.0_Chr4g0402291' => 'rch', 'RcHm_v2.0_Chr5g0032071' => 'rch', 'RcHm_v2.0_Chr5g0038981' => 'rch', 'RcHm_v2.0_Chr7g0183161' => 'rch', 'RcHm_v2.0_Chr7g0207931' => 'rch', 'RcHm_v2.0_Chr7g0213381' => 'rch', 'Rhsim05G0012100' => 'rsi', 'Rhsim05G0012200' => 'rsi', 'Rhsim05G0012300' => 'rsi', 'Rhsim08G0145600' => 'rsi', 'Rhsim11G0025300' => 'rsi', 'Rhsim11G0025400' => 'rsi', 'RhsimUnG0172500' => 'rsi', 'Sabra03G0069900' => 'sbr', 'Sabra06G0112600' => 'sbr', 'Sabra06G0113900' => 'sbr', 'Sabra15G0082600' => 'sbr', 'Sabra15G0083000' => 'sbr', 'Sabra18G0057900' => 'sbr', 'Sc01g0007020' => 'sci', 'Sc04g0004360' => 'sci', 'Sc19g0001900' => 'sci', 'Sed0000920' => 'sed', 'Sed0015067' => 'sed', 'Sed0022878' => 'sed', 'Sed0027547' => 'sed', 'SEGI_00003' => 'sgi', 'SEGI_00361' => 'sgi', 'SEGI_00679' => 'sgi', 'SEGI_00714' => 'sgi', 'SEGI_01198' => 'sgi', 'SEGI_01245' => 'sgi', 'SEGI_01360' => 'sgi', 'SEGI_01683' => 'sgi', 'SEGI_01959' => 'sgi', 'SEGI_02614' => 'sgi', 'SEGI_02685' => 'sgi', 'SEGI_02882' => 'sgi', 'SEGI_02899' => 'sgi', 'SEGI_03718' => 'sgi', 'SEGI_04497' => 'sgi', 'SEGI_04520' => 'sgi', 'SEGI_04795' => 'sgi', 'SEGI_05071' => 'sgi', 'SEGI_05176' => 'sgi', 'SEGI_05651' => 'sgi', 'SEGI_05771' => 'sgi', 'SEGI_06287' 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'SEGI_33676' => 'sgi', 'SEGI_33910' => 'sgi', 'SEGI_34155' => 'sgi', 'SEGI_34291' => 'sgi', 'SEGI_34315' => 'sgi', 'SEGI_34598' => 'sgi', 'SEGI_34761' => 'sgi', 'SEGI_34835' => 'sgi', 'SEGI_34998' => 'sgi', 'SEGI_35352' => 'sgi', 'SEGI_35512' => 'sgi', 'SEGI_35552' => 'sgi', 'SEGI_35732' => 'sgi', 'SEGI_36143' => 'sgi', 'SEGI_36496' => 'sgi', 'SEGI_36527' => 'sgi', 'SEGI_36585' => 'sgi', 'SEGI_36652' => 'sgi', 'SEGI_37497' => 'sgi', 'SEGI_37981' => 'sgi', 'SEGI_38047' => 'sgi', 'SEGI_38212' => 'sgi', 'SEGI_38690' => 'sgi', 'SEGI_38907' => 'sgi', 'SEGI_39067' => 'sgi', 'SEGI_39240' => 'sgi', 'SEGI_39273' => 'sgi', 'SEGI_39914' => 'sgi', 'SEGI_39946' => 'sgi', 'SEGI_40163' => 'sgi', 'SEGI_40188' => 'sgi', 'SEGI_40657' => 'sgi', 'SEGI_40735' => 'sgi', 'SEGI_40772' => 'sgi', 'SEGI_40900' => 'sgi', 'SEGI_41144' => 'sgi', 'SEGI_41182' => 'sgi', 'SEGI_41224' => 'sgi', 'SGA_v2.0_scaffold25G10955' => 'sas', 'SGA_v2.0_scaffold28G11745' => 'sas', 'SGA_v2.0_scaffold333G49017' => 'sas', 'SGA_v2.0_scaffold89G27397' => 'sas', 'SGA_v2.0_scaffold91G28086' => 'sas', 'SGA_v2.0_scaffold96G29068' => 'sas', 'SGA_v2.0_scaffold96G29069' => 'sas', 'SHI07207' => 'shi', 'SHI27089' => 'shi', 'SHI27090' => 'shi', 'SMO026G0001' => 'smo', 'SMO062G0004' => 'smo', 'SMO109G0004' => 'smo', 'SMO112G0064' => 'smo', 'SMO115G0028' => 'smo', 'SMO116G0284' => 'smo', 'SMO119G0217' => 'smo', 'SMO122G0012' => 'smo', 'SMO134G0024' => 'smo', 'SMO137G0045' => 'smo', 'SMO146G0099' => 'smo', 'SMO159G0007' => 'smo', 'SMO169G0286' => 'smo', 'SMO174G0100' => 'smo', 'SMO183G0002' => 'smo', 'SMO202G0046' => 'smo', 'SMO274G0007' => 'smo', 'SMO286G0019' => 'smo', 'SMO320G0001' => 'smo', 'SMO321G0001' => 'smo', 'SMO342G0003' => 'smo', 'SMO354G0006' => 'smo', 'SMO358G0534' => 'smo', 'SMO360G0011' => 'smo', 'SMO364G0527' => 'smo', 'SMO364G0729' => 'smo', 'SMO367G1049' => 'smo', 'Solyc03g115050.3' => 'sly', 'Solyc05g025590.4' => 'sly', 'Solyc08g075840.3' => 'sly', 'Sopen03g034120' => 'spe', 'Sopen05g020190' => 'spe', 'Sopen08g024480' => 'spe', 'Sp2g10350' => 'spa', 'Sp2g24310' => 'spa', 'Sp3g24710' => 'spa', 'Sp6g34920' => 'spa', 'Sp7g17830' => 'spa', 'TAR063G0004' => 'tar', 'TAR091G0002' => 'tar', 'TAR371G0114' => 'tar', 'TAR371G0671' => 'tar', 'TAR374G1226' => 'tar', 'TAR375G1100' => 'tar', 'TAR622G0908' => 'tar', 'TAR624G0651' => 'tar', 'TAR625G0518' => 'tar', 'TAR629G0759' => 'tar', 'TAR629G1891' => 'tar', 'THA.LOC104804633' => 'tha', 'THA.LOC104806192' => 'tha', 'THA.LOC104819400' => 'tha', 'THA.LOC104826582' => 'tha', 'Thecc.03G102500' => 'tca', 'Thecc.03G317500' => 'tca', 'Thecc.09G080300' => 'tca', 'Thecc.09G080500' => 'tca', 'Thhalv10000781m.g' => 'esa', 'Thhalv10001929m.g' => 'esa', 'Thhalv10003822m.g' => 'esa', 'Thhalv10013014m.g' => 'esa', 'Thhalv10024555m.g' => 'esa', 'TPR.G10916' => 'tpr', 'TPR.G15686' => 'tpr', 'TPR.G17277' => 'tpr', 'TPR.G20024' => 'tpr', 'TPR.G2021' => 'tpr', 'TPR.G29493' => 'tpr', 'TWI34G1166' => 'twi', 'TWI36G1694' => 'twi', 'TWI56G1436' => 'twi', 'TWI81G1098' => 'twi', 'unitig_22.g5102' => 'ugi', 'unitig_62.g23555' => 'ugi', 'vmacro00064' => 'vma', 'vmacro17144' => 'vma', 'vmacro17181' => 'vma', 'vmacro17211' => 'vma', 'vmacro17614' => 'vma', 'vmacro19552' => 'vma', 'vmacro19553' => 'vma', 'VMungo0720G0183' => 'vmu', 'VMungo1215G0840' => 'vmu', 'VMungo1215G1142' => 'vmu', 'VMungo1309G1355' => 'vmu', 'Zm00001eb008630' => 'zma', 'Zm00001eb193190' => 'zma', 'Zm00001eb266890' => 'zma', 'Zm00001eb282530' => 'zma', 'Zm00001eb400180' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D000824' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000824' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D000824' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000824' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
<label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
<label>Source(s)</label>
<select class='form form-select' name='ontology_source_group' id='ontology_source_group'>
<?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000824', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '721', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p33820' => 'bna', 'A01p33830' => 'bna', 'A01p33840' => 'bna', 'A02p29120' => 'bna', 'A03p03540' => 'bna', 'A03p46710' => 'bna', 'A03p51740' => 'bna', 'A07p06210' => 'bna', 'A09p07190' => 'bna', 'A09p21780' => 'bna', 'Aa31LG3G18510' => 'aar', 'Aa31LG6G1820' => 'aar', 'Aa31LG8G11780' => 'aar', 'Aa31LG9G7600' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2389' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.479' => 'aag', 'Actinidia01266' => 'ach', 'Actinidia04822' => 'ach', 'Actinidia16130' => 'ach', 'Actinidia16131' => 'ach', 'Actinidia16537' => 'ach', 'Actinidia32773' => 'ach', 'Actinidia39675' => 'ach', 'Ah.02g114080' => 'amhyb', 'Ah.07g201170' => 'amhyb', 'Ah.09g231350' => 'amhyb', 'Ah.11g047720' => 'amhyb', 'Ah.12g055800' => 'amhyb', 'AL1G45720' => 'aly', 'AL3G43800' => 'aly', 'AL6G18370' => 'aly', 'AL6G18410' => 'aly', 'AL6G19570' => 'aly', 'AL7G34960' => 'aly', 'AL8G37660' => 'aly', 'Aqoxy1G03346' => 'aox', 'Aqoxy3G02011' => 'aox', 'Aqoxy3G02012' => 'aox', 'Aqoxy3G02013' => 'aox', 'Aqoxy3G03684' => 'aox', 'Aqoxy4G01721' => 'aox', 'Aqoxy4G01813' => 'aox', 'Aqoxy6G02323' => 'aox', 'Aqoxy7G02240' => 'aox', 'Aqoxy7G04110' => 'aox', 'Aqoxy7G04112' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04BWFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71ADJA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79SD3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D7TWRW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3U0AR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J8WCL7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RQXR03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7GC2W' => 'arhy', 'AT2G06510' => 'ath', 'AT4G19130' => 'ath', 'AT5G08020' => 'ath', 'AT5G45400' => 'ath', 'AT5G61000' => 'ath', 'ATR0177G023' => 'atr', 'ATR0598G158' => 'atr', 'ATR0829G100' => 'atr', 'ATR0829G214' => 'atr', 'Atru.chr7.1669' => 'acertr', 'Atru.chr7.1670' => 'acertr', 'Atru.chr7.1671' => 'acertr', 'Atru.chr8.1429' => 'acertr', 'Atru.chr8.1430' => 'acertr', 'Atru.chr9.564' => 'acertr', 'AUR62007386' => 'cqu', 'AUR62008537' => 'cqu', 'AUR62018601' => 'cqu', 'AUR62021554' => 'cqu', 'AUR62025182' => 'cqu', 'AUR62028992' => 'cqu', 'BcaB01g05642' => 'bca', 'BcaB01g05683' => 'bca', 'BcaB02g09847' => 'bca', 'BcaB07g30456' => 'bca', 'BcaB07g30884' => 'bca', 'BcaB08g37297' => 'bca', 'BcaC04g21762' => 'bca', 'BcaC04g23467' => 'bca', 'BcaC05g24775' => 'bca', 'BcaC06g30610' => 'bca', 'BcaC06g32889' => 'bca', 'BcaC06g33184' => 'bca', 'BcaC06g35976' => 'bca', 'BcaC09g50885' => 'bca', 'BcaNung03077' => 'bca', 'BcaNung06900' => 'bca', 'BolC1t03820H' => 'bol', 'BolC2t10676H' => 'bol', 'BolC3t12936H' => 'bol', 'BolC5t29475H' => 'bol', 'BolC7t41345H' => 'bol', 'BolC7t44999H' => 'bol', 'BolC7t45528H' => 'bol', 'BolC7t45846H' => 'bol', 'BolC9t53717H' => 'bol', 'BolC9t55651H' => 'bol', 'BraA02t07945Z' => 'bra', 'BraA03t09704Z' => 'bra', 'BraA03t13794Z' => 'bra', 'BraA03t14263Z' => 'bra', 'BraA07t28419Z' => 'bra', 'BraA09t36368Z' => 'bra', 'BraA09t37781Z' => 'bra', 'C01p38580' => 'bna', 'C02p46200' => 'bna', 'C03p03990' => 'bna', 'C05p07210' => 'bna', 'C07p09270' => 'bna', 'C07p44760' => 'bna', 'C07p50260' => 'bna', 'C09p08030' => 'bna', 'C09p27880' => 'bna', 'CAN.G1228.20' => 'can', 'CAN.G1427.10' => 'can', 'CAN.G148.16' => 'can', 'CAN.G227.6' => 'can', 'CANSAT01G1154' => 'cansat', 'CANSAT54G1889' => 'cansat', 'CANSAT56G3947' => 'cansat', 'CANSAT80G1236' => 'cansat', 'CARHR103830' => 'chi', 'CARHR176670' => 'chi', 'CARHR205160' => 'chi', 'CARHR274710' => 'chi', 'Carub.0003s2727' => 'cru', 'Carub.0006s0691' => 'cru', 'Carub.0007s2202' => 'cru', 'Carub.0008s0271' => 'cru', 'Carub.0008s2169' => 'cru', 'Ca_13349_v3' => 'car', 'Ca_21769_v3' => 'car', 'Ca_21770_v3' => 'car', 'Ca_25103_v3' => 'car', 'CBR_g23266' => 'cbr', 'CBR_g36292' => 'cbr', 'CBR_g37119' => 'cbr', 'CBR_g55372' => 'cbr', 'Cc00_g07660' => 'ccan', 'Cc06_g11960' => 'ccan', 'Cc08_g05150' => 'ccan', 'CDE01G0675' => 'cde', 'CDE02G4126' => 'cde', 'CDE06G1892' => 'cde', 'CDE11G0897' => 'cde', 'CDE12G0883' => 'cde', 'Cfa003026' => 'cfa', 'Cfa012589' => 'cfa', 'Cfa019342' => 'cfa', 'Cfa025402' => 'cfa', 'Ciclev10000254m.g' => 'ccl', 'Ciclev10009939m.g' => 'ccl', 'Ciclev10010492m.g' => 'ccl', 'Ciclev10019317m.g' => 'ccl', 'CiPaw.03G209600' => 'cil', 'CiPaw.11G054100' => 'cil', 'CiPaw.11G103100' => 'cil', 'ClCG06G015600' => 'cla', 'ClCG10G001050' => 'cla', 'ClCG11G001530' => 'cla', 'COL.COLO4_06851' => 'col', 'COL.COLO4_14060' => 'col', 'COL.COLO4_18126' => 'col', 'COL.COLO4_32275' => 'col', 'Cpa.g.sc1086.1' => 'cpa', 'Cpa.g.sc137.10' => 'cpa', 'Cpa.g.sc137.11' => 'cpa', 'Cpa.g.sc28.78' => 'cpa', 'Cre16.g651000' => 'cre', 'Cre17.g718850' => 'cre', 'CsaV3_1G002970' => 'csa', 'CsaV3_2G001260' => 'csa', 'CsaV3_3G001070' => 'csa', 'CSS0005493' => 'camsi', 'CSS0007192' => 'camsi', 'CSS0009813' => 'camsi', 'CSS0020965' => 'camsi', 'CSS0031599' => 'camsi', 'CSS0032107' => 'camsi', 'CSS0033943' => 'camsi', 'CSS0043196' => 'camsi', 'DCAR_004240' => 'dca', 'DCAR_011568' => 'dca', 'DCAR_011569' => 'dca', 'DCAR_023168' => 'dca', 'DCAR_028290' => 'dca', 'Dinv06490' => 'din', 'Dinv08250' => 'din', 'Dinv08482' => 'din', 'Dinv10520' => 'din', 'Dinv17419' => 'din', 'Dinv19531' => 'din', 'Dinv22755' => 'din', 'Dinv22775' => 'din', 'Dinv22867' => 'din', 'Dinv26272' => 'din', 'Dinv26739' => 'din', 'Dinv28015' => 'din', 'Dinv30925' => 'din', 'Dinv41987' => 'din', 'Dinv42372' => 'din', 'Duzib084G0695' => 'dzi', 'Duzib168G1443' => 'dzi', 'Duzib205G0152' => 'dzi', 'Duzib205G1830' => 'dzi', 'ECA240G2629' => 'eca', 'ECA240G4292' => 'eca', 'ECA246G1424' => 'eca', 'ECA246G1912' => 'eca', 'ECA246G2513' => 'eca', 'ECA246G3369' => 'eca', 'ECA247G3309' => 'eca', 'EL10Ac5g11138' => 'bvu', 'EL10Ac5g11968' => 'bvu', 'EL10Ac8g19115' => 'bvu', 'Eucgr.B00599' => 'egr', 'Eucgr.B00601' => 'egr', 'Eucgr.C03561' => 'egr', 'Eucgr.D02593' => 'egr', 'FAN04G2448' => 'fan', 'FAN08G1674' => 'fan', 'FAN08G2719' => 'fan', 'FAN13G0731' => 'fan', 'FAN13G2002' => 'fan', 'FAN18G2954' => 'fan', 'FAN18G3561' => 'fan', 'FAN18G4284' => 'fan', 'FAN19G2973' => 'fan', 'FAN23G0408' => 'fan', 'FAN26G2759' => 'fan', 'FAN26G2843' => 'fan', 'FvH4_1g08261' => 'fve', 'FvH4_5g13771' => 'fve', 'FvH4_5g23941' => 'fve', 'Glyma.05G020600' => 'gma', 'Glyma.09G213300' => 'gma', 'Glyma.09G213500' => 'gma', 'Glyma.15G174100' => 'gma', 'Glyma.17G078700' => 'gma', 'Gohir.A03G070300' => 'ghi', 'Gohir.A12G202700' => 'ghi', 'Gohir.A13G191600' => 'ghi', 'Gohir.D03G096700' => 'ghi', 'Gohir.D12G205400' => 'ghi', 'Gohir.D13G197000' => 'ghi', 'Gorai.003G101500' => 'gra', 'Gorai.008G220300' => 'gra', 'Gorai.013G225700' => 'gra', 'GSVIVG01002032001' => 'vvi', 'GSVIVG01007849001' => 'vvi', 'GSVIVG01014617001' => 'vvi', 'GSVIVG01014619001' => 'vvi', 'GSVIVG01015111001' => 'vvi', 'GSVIVG01020590001' => 'vvi', 'GSVIVG01022784001' => 'vvi', 'GSVIVG01023662001' => 'vvi', 'GSVIVG01023663001' => 'vvi', 'GSVIVG01032319001' => 'vvi', 'GSVIVG01032320001' => 'vvi', 'GSVIVG01035135001' => 'vvi', 'GSVIVG01037062001' => 'vvi', 'GSVIVG01037063001' => 'vvi', 'HanXRQChr02g0044771' => 'han', 'HanXRQChr03g0081181' => 'han', 'HanXRQChr10g0300431' => 'han', 'HanXRQChr10g0300451' => 'han', 'HanXRQChr10g0319611' => 'han', 'HanXRQChr16g0517661' => 'han', 'HanXRQChr17g0539191' => 'han', 'Haze_07734' => 'cav', 'Haze_08068' => 'cav', 'Haze_25975' => 'cav', 'Hma1.2p1_0060F.1_g033050' => 'hma', 'Hma1.2p1_0544F.1_g175470' => 'hma', 'HPP92_012596' => 'vpl', 'HPP92_014050' => 'vpl', 'HPP92_014304' => 'vpl', 'HPP92_019327' => 'vpl', 'Hund02583' => 'sun', 'Hund09917' => 'sun', 'Hund11146' => 'sun', 'Hund26003' => 'sun', 'Lalb_Chr08g0232511' => 'lal', 'Lalb_Chr12g0197221' => 'lal', 'Lalb_Chr13g0302831' => 'lal', 'Lalb_Chr16g0380751' => 'lal', 'Lj2g0016644' => 'lja', 'Lj2g0019271' => 'lja', 'Lj4A909T87' => 'lonja', 'Lj4C905G6' => 'lonja', 'Lj4C909T19' => 'lonja', 'Lj4g0011361' => 'lja', 'Lj4g0021262' => 'lja', 'Lj5A102T96' => 'lonja', 'Lj6g0016995' => 'lja', 'Lj8C334G12' => 'lonja', 'Lj9C471T8' => 'lonja', 'Lsat_1_v5_gn_1_14461' => 'lsa', 'Lsat_1_v5_gn_3_26741' => 'lsa', 'Lsat_1_v5_gn_3_26761' => 'lsa', 'Lsat_1_v5_gn_5_141780' => 'lsa', 'Lsat_1_v5_gn_5_58221' => 'lsa', 'Lsat_1_v5_gn_5_58641' => 'lsa', 'Manes.03G038600' => 'mes', 'Manes.06G084200' => 'mes', 'Manes.17G003800' => 'mes', 'Manes.17G004337' => 'mes', 'Mapoly0109s0044' => 'mpo', 'Mapoly0125s0021' => 'mpo', 'MBI04_g27279_MAGBIO' => 'mbi', 'MBI07_g08573_MAGBIO' => 'mbi', 'MBI07_g46481_MAGBIO' => 'mbi', 'MBI11_g43227_MAGBIO' => 'mbi', 'MBI13_g21846_MAGBIO' => 'mbi', 'MBI17_g04594_MAGBIO' => 'mbi', 'MBI19_g11847_MAGBIO' => 'mbi', 'MCO07G139' => 'mco', 'MCO09G242' => 'mco', 'MD00G1001700' => 'mdo', 'MD02G1087200' => 'mdo', 'MD06G1015200' => 'mdo', 'MD06G1225500' => 'mdo', 'MD14G1212400' => 'mdo', 'MD15G1214800' => 'mdo', 'Medtr1g095050' => 'mtr', 'Medtr2g041270' => 'mtr', 'Medtr3g047950' => 'mtr', 'Medtr4g064240' => 'mtr', 'Medtr4g109580' => 'mtr', 'Medtr4g109590' => 'mtr', 'Medtr5g026880' => 'mtr', 'Medtr5g048670' => 'mtr', 'MELO3C004643.2' => 'cme', 'MELO3C013797.2' => 'cme', 'MELO3C017228.2' => 'cme', 'Migut.A00558' => 'egut', 'Migut.I00367' => 'egut', 'Migut.J00947' => 'egut', 'MSTRG.11337' => 'ama', 'MSTRG.22957' => 'ama', 'MSTRG.25728' => 'ama', 'Nitab4.5_0000024g0120' => 'nta', 'Nitab4.5_0000108g0410' => 'nta', 'Nitab4.5_0001485g0110' => 'nta', 'Nitab4.5_0003992g0030' => 'nta', 'Nitab4.5_0006563g0010' => 'nta', 'Nitab4.5_0009401g0060' => 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'Psat2g142080' => 'psa', 'Psat4g047800' => 'psa', 'PSO017G4603' => 'pso', 'PSO063G1428' => 'pso', 'PSO063G2170' => 'pso', 'PSO063G2983' => 'pso', 'PSO063G4795' => 'pso', 'PSO210G0233' => 'pso', 'PSO210G5735' => 'pso', 'PSO478G2603' => 'pso', 'PSO731G0068' => 'pso', 'PSO782G4142' => 'pso', 'QL02p061033' => 'qlo', 'QL10p019699' => 'qlo', 'QL12p000754' => 'qlo', 'QL12p000778' => 'qlo', 'RcHm_v2.0_Chr2g0094351' => 'rch', 'RcHm_v2.0_Chr2g0106871' => 'rch', 'RcHm_v2.0_Chr4g0402291' => 'rch', 'RcHm_v2.0_Chr5g0032071' => 'rch', 'RcHm_v2.0_Chr5g0038981' => 'rch', 'RcHm_v2.0_Chr7g0183161' => 'rch', 'RcHm_v2.0_Chr7g0207931' => 'rch', 'RcHm_v2.0_Chr7g0213381' => 'rch', 'Rhsim05G0012100' => 'rsi', 'Rhsim05G0012200' => 'rsi', 'Rhsim05G0012300' => 'rsi', 'Rhsim08G0145600' => 'rsi', 'Rhsim11G0025300' => 'rsi', 'Rhsim11G0025400' => 'rsi', 'RhsimUnG0172500' => 'rsi', 'Sabra03G0069900' => 'sbr', 'Sabra06G0112600' => 'sbr', 'Sabra06G0113900' => 'sbr', 'Sabra15G0082600' => 'sbr', 'Sabra15G0083000' => 'sbr', 'Sabra18G0057900' => 'sbr', 'Sc01g0007020' => 'sci', 'Sc04g0004360' => 'sci', 'Sc19g0001900' => 'sci', 'Sed0000920' => 'sed', 'Sed0015067' => 'sed', 'Sed0022878' => 'sed', 'Sed0027547' => 'sed', 'SEGI_00003' => 'sgi', 'SEGI_00361' => 'sgi', 'SEGI_00679' => 'sgi', 'SEGI_00714' => 'sgi', 'SEGI_01198' => 'sgi', 'SEGI_01245' => 'sgi', 'SEGI_01360' => 'sgi', 'SEGI_01683' => 'sgi', 'SEGI_01959' => 'sgi', 'SEGI_02614' => 'sgi', 'SEGI_02685' => 'sgi', 'SEGI_02882' => 'sgi', 'SEGI_02899' => 'sgi', 'SEGI_03718' => 'sgi', 'SEGI_04497' => 'sgi', 'SEGI_04520' => 'sgi', 'SEGI_04795' => 'sgi', 'SEGI_05071' => 'sgi', 'SEGI_05176' => 'sgi', 'SEGI_05651' => 'sgi', 'SEGI_05771' => 'sgi', 'SEGI_06287' => 'sgi', 'SEGI_06336' => 'sgi', 'SEGI_06573' => 'sgi', 'SEGI_06635' => 'sgi', 'SEGI_06941' => 'sgi', 'SEGI_07067' => 'sgi', 'SEGI_07193' => 'sgi', 'SEGI_08053' => 'sgi', 'SEGI_08060' => 'sgi', 'SEGI_08111' => 'sgi', 'SEGI_08146' => 'sgi', 'SEGI_08283' => 'sgi', 'SEGI_08943' => 'sgi', 'SEGI_09316' => 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'SEGI_36143' => 'sgi', 'SEGI_36496' => 'sgi', 'SEGI_36527' => 'sgi', 'SEGI_36585' => 'sgi', 'SEGI_36652' => 'sgi', 'SEGI_37497' => 'sgi', 'SEGI_37981' => 'sgi', 'SEGI_38047' => 'sgi', 'SEGI_38212' => 'sgi', 'SEGI_38690' => 'sgi', 'SEGI_38907' => 'sgi', 'SEGI_39067' => 'sgi', 'SEGI_39240' => 'sgi', 'SEGI_39273' => 'sgi', 'SEGI_39914' => 'sgi', 'SEGI_39946' => 'sgi', 'SEGI_40163' => 'sgi', 'SEGI_40188' => 'sgi', 'SEGI_40657' => 'sgi', 'SEGI_40735' => 'sgi', 'SEGI_40772' => 'sgi', 'SEGI_40900' => 'sgi', 'SEGI_41144' => 'sgi', 'SEGI_41182' => 'sgi', 'SEGI_41224' => 'sgi', 'SGA_v2.0_scaffold25G10955' => 'sas', 'SGA_v2.0_scaffold28G11745' => 'sas', 'SGA_v2.0_scaffold333G49017' => 'sas', 'SGA_v2.0_scaffold89G27397' => 'sas', 'SGA_v2.0_scaffold91G28086' => 'sas', 'SGA_v2.0_scaffold96G29068' => 'sas', 'SGA_v2.0_scaffold96G29069' => 'sas', 'SHI07207' => 'shi', 'SHI27089' => 'shi', 'SHI27090' => 'shi', 'SMO026G0001' => 'smo', 'SMO062G0004' => 'smo', 'SMO109G0004' => 'smo', 'SMO112G0064' => 'smo', 'SMO115G0028' => 'smo', 'SMO116G0284' => 'smo', 'SMO119G0217' => 'smo', 'SMO122G0012' => 'smo', 'SMO134G0024' => 'smo', 'SMO137G0045' => 'smo', 'SMO146G0099' => 'smo', 'SMO159G0007' => 'smo', 'SMO169G0286' => 'smo', 'SMO174G0100' => 'smo', 'SMO183G0002' => 'smo', 'SMO202G0046' => 'smo', 'SMO274G0007' => 'smo', 'SMO286G0019' => 'smo', 'SMO320G0001' => 'smo', 'SMO321G0001' => 'smo', 'SMO342G0003' => 'smo', 'SMO354G0006' => 'smo', 'SMO358G0534' => 'smo', 'SMO360G0011' => 'smo', 'SMO364G0527' => 'smo', 'SMO364G0729' => 'smo', 'SMO367G1049' => 'smo', 'Solyc03g115050.3' => 'sly', 'Solyc05g025590.4' => 'sly', 'Solyc08g075840.3' => 'sly', 'Sopen03g034120' => 'spe', 'Sopen05g020190' => 'spe', 'Sopen08g024480' => 'spe', 'Sp2g10350' => 'spa', 'Sp2g24310' => 'spa', 'Sp3g24710' => 'spa', 'Sp6g34920' => 'spa', 'Sp7g17830' => 'spa', 'TAR063G0004' => 'tar', 'TAR091G0002' => 'tar', 'TAR371G0114' => 'tar', 'TAR371G0671' => 'tar', 'TAR374G1226' => 'tar', 'TAR375G1100' => 'tar', 'TAR622G0908' => 'tar', 'TAR624G0651' => 'tar', 'TAR625G0518' => 'tar', 'TAR629G0759' => 'tar', 'TAR629G1891' => 'tar', 'THA.LOC104804633' => 'tha', 'THA.LOC104806192' => 'tha', 'THA.LOC104819400' => 'tha', 'THA.LOC104826582' => 'tha', 'Thecc.03G102500' => 'tca', 'Thecc.03G317500' => 'tca', 'Thecc.09G080300' => 'tca', 'Thecc.09G080500' => 'tca', 'Thhalv10000781m.g' => 'esa', 'Thhalv10001929m.g' => 'esa', 'Thhalv10003822m.g' => 'esa', 'Thhalv10013014m.g' => 'esa', 'Thhalv10024555m.g' => 'esa', 'TPR.G10916' => 'tpr', 'TPR.G15686' => 'tpr', 'TPR.G17277' => 'tpr', 'TPR.G20024' => 'tpr', 'TPR.G2021' => 'tpr', 'TPR.G29493' => 'tpr', 'TWI34G1166' => 'twi', 'TWI36G1694' => 'twi', 'TWI56G1436' => 'twi', 'TWI81G1098' => 'twi', 'unitig_22.g5102' => 'ugi', 'unitig_62.g23555' => 'ugi', 'vmacro00064' => 'vma', 'vmacro17144' => 'vma', 'vmacro17181' => 'vma', 'vmacro17211' => 'vma', 'vmacro17614' => 'vma', 'vmacro19552' => 'vma', 'vmacro19553' => 'vma', 'VMungo0720G0183' => 'vmu', 'VMungo1215G0840' => 'vmu', 'VMungo1215G1142' => 'vmu', 'VMungo1309G1355' => 'vmu', 'Zm00001eb008630' => 'zma', 'Zm00001eb193190' => 'zma', 'Zm00001eb266890' => 'zma', 'Zm00001eb282530' => 'zma', 'Zm00001eb400180' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D000824', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000824' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D000824', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '721', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000824' ) ), 'genes' => array( 'A01p33820' => 'bna', 'A01p33830' => 'bna', 'A01p33840' => 'bna', 'A02p29120' => 'bna', 'A03p03540' => 'bna', 'A03p46710' => 'bna', 'A03p51740' => 'bna', 'A07p06210' => 'bna', 'A09p07190' => 'bna', 'A09p21780' => 'bna', 'Aa31LG3G18510' => 'aar', 'Aa31LG6G1820' => 'aar', 'Aa31LG8G11780' => 'aar', 'Aa31LG9G7600' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2389' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.479' => 'aag', 'Actinidia01266' => 'ach', 'Actinidia04822' => 'ach', 'Actinidia16130' => 'ach', 'Actinidia16131' => 'ach', 'Actinidia16537' => 'ach', 'Actinidia32773' => 'ach', 'Actinidia39675' => 'ach', 'Ah.02g114080' => 'amhyb', 'Ah.07g201170' => 'amhyb', 'Ah.09g231350' => 'amhyb', 'Ah.11g047720' => 'amhyb', 'Ah.12g055800' => 'amhyb', 'AL1G45720' => 'aly', 'AL3G43800' => 'aly', 'AL6G18370' => 'aly', 'AL6G18410' => 'aly', 'AL6G19570' => 'aly', 'AL7G34960' => 'aly', 'AL8G37660' => 'aly', 'Aqoxy1G03346' => 'aox', 'Aqoxy3G02011' => 'aox', 'Aqoxy3G02012' => 'aox', 'Aqoxy3G02013' => 'aox', 'Aqoxy3G03684' => 'aox', 'Aqoxy4G01721' => 'aox', 'Aqoxy4G01813' => 'aox', 'Aqoxy6G02323' => 'aox', 'Aqoxy7G02240' => 'aox', 'Aqoxy7G04110' => 'aox', 'Aqoxy7G04112' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04BWFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71ADJA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79SD3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D7TWRW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3U0AR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J8WCL7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RQXR03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7GC2W' => 'arhy', 'AT2G06510' => 'ath', 'AT4G19130' => 'ath', 'AT5G08020' => 'ath', 'AT5G45400' => 'ath', 'AT5G61000' => 'ath', 'ATR0177G023' => 'atr', 'ATR0598G158' => 'atr', 'ATR0829G100' => 'atr', 'ATR0829G214' => 'atr', 'Atru.chr7.1669' => 'acertr', 'Atru.chr7.1670' => 'acertr', 'Atru.chr7.1671' => 'acertr', 'Atru.chr8.1429' => 'acertr', 'Atru.chr8.1430' => 'acertr', 'Atru.chr9.564' => 'acertr', 'AUR62007386' => 'cqu', 'AUR62008537' => 'cqu', 'AUR62018601' => 'cqu', 'AUR62021554' => 'cqu', 'AUR62025182' => 'cqu', 'AUR62028992' => 'cqu', 'BcaB01g05642' => 'bca', 'BcaB01g05683' => 'bca', 'BcaB02g09847' => 'bca', 'BcaB07g30456' => 'bca', 'BcaB07g30884' => 'bca', 'BcaB08g37297' => 'bca', 'BcaC04g21762' => 'bca', 'BcaC04g23467' => 'bca', 'BcaC05g24775' => 'bca', 'BcaC06g30610' => 'bca', 'BcaC06g32889' => 'bca', 'BcaC06g33184' => 'bca', 'BcaC06g35976' => 'bca', 'BcaC09g50885' => 'bca', 'BcaNung03077' => 'bca', 'BcaNung06900' => 'bca', 'BolC1t03820H' => 'bol', 'BolC2t10676H' => 'bol', 'BolC3t12936H' => 'bol', 'BolC5t29475H' => 'bol', 'BolC7t41345H' => 'bol', 'BolC7t44999H' => 'bol', 'BolC7t45528H' => 'bol', 'BolC7t45846H' => 'bol', 'BolC9t53717H' => 'bol', 'BolC9t55651H' => 'bol', 'BraA02t07945Z' => 'bra', 'BraA03t09704Z' => 'bra', 'BraA03t13794Z' => 'bra', 'BraA03t14263Z' => 'bra', 'BraA07t28419Z' => 'bra', 'BraA09t36368Z' => 'bra', 'BraA09t37781Z' => 'bra', 'C01p38580' => 'bna', 'C02p46200' => 'bna', 'C03p03990' => 'bna', 'C05p07210' => 'bna', 'C07p09270' => 'bna', 'C07p44760' => 'bna', 'C07p50260' => 'bna', 'C09p08030' => 'bna', 'C09p27880' => 'bna', 'CAN.G1228.20' => 'can', 'CAN.G1427.10' => 'can', 'CAN.G148.16' => 'can', 'CAN.G227.6' => 'can', 'CANSAT01G1154' => 'cansat', 'CANSAT54G1889' => 'cansat', 'CANSAT56G3947' => 'cansat', 'CANSAT80G1236' => 'cansat', 'CARHR103830' => 'chi', 'CARHR176670' => 'chi', 'CARHR205160' => 'chi', 'CARHR274710' => 'chi', 'Carub.0003s2727' => 'cru', 'Carub.0006s0691' => 'cru', 'Carub.0007s2202' => 'cru', 'Carub.0008s0271' => 'cru', 'Carub.0008s2169' => 'cru', 'Ca_13349_v3' => 'car', 'Ca_21769_v3' => 'car', 'Ca_21770_v3' => 'car', 'Ca_25103_v3' => 'car', 'CBR_g23266' => 'cbr', 'CBR_g36292' => 'cbr', 'CBR_g37119' => 'cbr', 'CBR_g55372' => 'cbr', 'Cc00_g07660' => 'ccan', 'Cc06_g11960' => 'ccan', 'Cc08_g05150' => 'ccan', 'CDE01G0675' => 'cde', 'CDE02G4126' => 'cde', 'CDE06G1892' => 'cde', 'CDE11G0897' => 'cde', 'CDE12G0883' => 'cde', 'Cfa003026' => 'cfa', 'Cfa012589' => 'cfa', 'Cfa019342' => 'cfa', 'Cfa025402' => 'cfa', 'Ciclev10000254m.g' => 'ccl', 'Ciclev10009939m.g' => 'ccl', 'Ciclev10010492m.g' => 'ccl', 'Ciclev10019317m.g' => 'ccl', 'CiPaw.03G209600' => 'cil', 'CiPaw.11G054100' => 'cil', 'CiPaw.11G103100' => 'cil', 'ClCG06G015600' => 'cla', 'ClCG10G001050' => 'cla', 'ClCG11G001530' => 'cla', 'COL.COLO4_06851' => 'col', 'COL.COLO4_14060' => 'col', 'COL.COLO4_18126' => 'col', 'COL.COLO4_32275' => 'col', 'Cpa.g.sc1086.1' => 'cpa', 'Cpa.g.sc137.10' => 'cpa', 'Cpa.g.sc137.11' => 'cpa', 'Cpa.g.sc28.78' => 'cpa', 'Cre16.g651000' => 'cre', 'Cre17.g718850' => 'cre', 'CsaV3_1G002970' => 'csa', 'CsaV3_2G001260' => 'csa', 'CsaV3_3G001070' => 'csa', 'CSS0005493' => 'camsi', 'CSS0007192' => 'camsi', 'CSS0009813' => 'camsi', 'CSS0020965' => 'camsi', 'CSS0031599' => 'camsi', 'CSS0032107' => 'camsi', 'CSS0033943' => 'camsi', 'CSS0043196' => 'camsi', 'DCAR_004240' => 'dca', 'DCAR_011568' => 'dca', 'DCAR_011569' => 'dca', 'DCAR_023168' => 'dca', 'DCAR_028290' => 'dca', 'Dinv06490' => 'din', 'Dinv08250' => 'din', 'Dinv08482' => 'din', 'Dinv10520' => 'din', 'Dinv17419' => 'din', 'Dinv19531' => 'din', 'Dinv22755' => 'din', 'Dinv22775' => 'din', 'Dinv22867' => 'din', 'Dinv26272' => 'din', 'Dinv26739' => 'din', 'Dinv28015' => 'din', 'Dinv30925' => 'din', 'Dinv41987' => 'din', 'Dinv42372' => 'din', 'Duzib084G0695' => 'dzi', 'Duzib168G1443' => 'dzi', 'Duzib205G0152' => 'dzi', 'Duzib205G1830' => 'dzi', 'ECA240G2629' => 'eca', 'ECA240G4292' => 'eca', 'ECA246G1424' => 'eca', 'ECA246G1912' => 'eca', 'ECA246G2513' => 'eca', 'ECA246G3369' => 'eca', 'ECA247G3309' => 'eca', 'EL10Ac5g11138' => 'bvu', 'EL10Ac5g11968' => 'bvu', 'EL10Ac8g19115' => 'bvu', 'Eucgr.B00599' => 'egr', 'Eucgr.B00601' => 'egr', 'Eucgr.C03561' => 'egr', 'Eucgr.D02593' => 'egr', 'FAN04G2448' => 'fan', 'FAN08G1674' => 'fan', 'FAN08G2719' => 'fan', 'FAN13G0731' => 'fan', 'FAN13G2002' => 'fan', 'FAN18G2954' => 'fan', 'FAN18G3561' => 'fan', 'FAN18G4284' => 'fan', 'FAN19G2973' => 'fan', 'FAN23G0408' => 'fan', 'FAN26G2759' => 'fan', 'FAN26G2843' => 'fan', 'FvH4_1g08261' => 'fve', 'FvH4_5g13771' => 'fve', 'FvH4_5g23941' => 'fve', 'Glyma.05G020600' => 'gma', 'Glyma.09G213300' => 'gma', 'Glyma.09G213500' => 'gma', 'Glyma.15G174100' => 'gma', 'Glyma.17G078700' => 'gma', 'Gohir.A03G070300' => 'ghi', 'Gohir.A12G202700' => 'ghi', 'Gohir.A13G191600' => 'ghi', 'Gohir.D03G096700' => 'ghi', 'Gohir.D12G205400' => 'ghi', 'Gohir.D13G197000' => 'ghi', 'Gorai.003G101500' => 'gra', 'Gorai.008G220300' => 'gra', 'Gorai.013G225700' => 'gra', 'GSVIVG01002032001' => 'vvi', 'GSVIVG01007849001' => 'vvi', 'GSVIVG01014617001' => 'vvi', 'GSVIVG01014619001' => 'vvi', 'GSVIVG01015111001' => 'vvi', 'GSVIVG01020590001' => 'vvi', 'GSVIVG01022784001' => 'vvi', 'GSVIVG01023662001' => 'vvi', 'GSVIVG01023663001' => 'vvi', 'GSVIVG01032319001' => 'vvi', 'GSVIVG01032320001' => 'vvi', 'GSVIVG01035135001' => 'vvi', 'GSVIVG01037062001' => 'vvi', 'GSVIVG01037063001' => 'vvi', 'HanXRQChr02g0044771' => 'han', 'HanXRQChr03g0081181' => 'han', 'HanXRQChr10g0300431' => 'han', 'HanXRQChr10g0300451' => 'han', 'HanXRQChr10g0319611' => 'han', 'HanXRQChr16g0517661' => 'han', 'HanXRQChr17g0539191' => 'han', 'Haze_07734' => 'cav', 'Haze_08068' => 'cav', 'Haze_25975' => 'cav', 'Hma1.2p1_0060F.1_g033050' => 'hma', 'Hma1.2p1_0544F.1_g175470' => 'hma', 'HPP92_012596' => 'vpl', 'HPP92_014050' => 'vpl', 'HPP92_014304' => 'vpl', 'HPP92_019327' => 'vpl', 'Hund02583' => 'sun', 'Hund09917' => 'sun', 'Hund11146' => 'sun', 'Hund26003' => 'sun', 'Lalb_Chr08g0232511' => 'lal', 'Lalb_Chr12g0197221' => 'lal', 'Lalb_Chr13g0302831' => 'lal', 'Lalb_Chr16g0380751' => 'lal', 'Lj2g0016644' => 'lja', 'Lj2g0019271' => 'lja', 'Lj4A909T87' => 'lonja', 'Lj4C905G6' => 'lonja', 'Lj4C909T19' => 'lonja', 'Lj4g0011361' => 'lja', 'Lj4g0021262' => 'lja', 'Lj5A102T96' => 'lonja', 'Lj6g0016995' => 'lja', 'Lj8C334G12' => 'lonja', 'Lj9C471T8' => 'lonja', 'Lsat_1_v5_gn_1_14461' => 'lsa', 'Lsat_1_v5_gn_3_26741' => 'lsa', 'Lsat_1_v5_gn_3_26761' => 'lsa', 'Lsat_1_v5_gn_5_141780' => 'lsa', 'Lsat_1_v5_gn_5_58221' => 'lsa', 'Lsat_1_v5_gn_5_58641' => 'lsa', 'Manes.03G038600' => 'mes', 'Manes.06G084200' => 'mes', 'Manes.17G003800' => 'mes', 'Manes.17G004337' => 'mes', 'Mapoly0109s0044' => 'mpo', 'Mapoly0125s0021' => 'mpo', 'MBI04_g27279_MAGBIO' => 'mbi', 'MBI07_g08573_MAGBIO' => 'mbi', 'MBI07_g46481_MAGBIO' => 'mbi', 'MBI11_g43227_MAGBIO' => 'mbi', 'MBI13_g21846_MAGBIO' => 'mbi', 'MBI17_g04594_MAGBIO' => 'mbi', 'MBI19_g11847_MAGBIO' => 'mbi', 'MCO07G139' => 'mco', 'MCO09G242' => 'mco', 'MD00G1001700' => 'mdo', 'MD02G1087200' => 'mdo', 'MD06G1015200' => 'mdo', 'MD06G1225500' => 'mdo', 'MD14G1212400' => 'mdo', 'MD15G1214800' => 'mdo', 'Medtr1g095050' => 'mtr', 'Medtr2g041270' => 'mtr', 'Medtr3g047950' => 'mtr', 'Medtr4g064240' => 'mtr', 'Medtr4g109580' => 'mtr', 'Medtr4g109590' => 'mtr', 'Medtr5g026880' => 'mtr', 'Medtr5g048670' => 'mtr', 'MELO3C004643.2' => 'cme', 'MELO3C013797.2' => 'cme', 'MELO3C017228.2' => 'cme', 'Migut.A00558' => 'egut', 'Migut.I00367' => 'egut', 'Migut.J00947' => 'egut', 'MSTRG.11337' => 'ama', 'MSTRG.22957' => 'ama', 'MSTRG.25728' => 'ama', 'Nitab4.5_0000024g0120' => 'nta', 'Nitab4.5_0000108g0410' => 'nta', 'Nitab4.5_0001485g0110' => 'nta', 'Nitab4.5_0003992g0030' => 'nta', 'Nitab4.5_0006563g0010' => 'nta', 'Nitab4.5_0009401g0060' => 'nta', 'Nn1g02070' => 'nnu', 'Nn3g17458' => 'nnu', 'Nn4g23436' => 'nnu', 'Nn5g28104' => 'nnu', 'Nn8g38709' => 'nnu', 'Nn8g40648' => 'nnu', 'Oeu017324.1' => 'oeu', 'Oeu042211.1' => 'oeu', 'Oeu044875.1' => 'oeu', 'Oeu061166.1' => 'oeu', 'Os02g0776800' => 'osa', 'Os03g0214100' => 'osa', 'Os05g0111000' => 'osa', 'Peaxi162Scf00201g00330' => 'pax', 'Peaxi162Scf00408g00837' => 'pax', 'Peaxi162Scf00724g00059' => 'pax', 'PGR031G2041' => 'pgr', 'PGR031G3208' => 'pgr', 'PGR044G0832' => 'pgr', 'PGR083G2843' => 'pgr', 'PGSC0003DMG400024634' => 'stu', 'PGSC0003DMG400030860' => 'stu', 'PGSC0003DMG400044420' => 'stu', 'Phvul.002G128800' => 'pvu', 'Phvul.003G184400' => 'pvu', 'Phvul.009G228500' => 'pvu', 'Potri.003G102700' => 'ptr', 'Potri.015G057300' => 'ptr', 'Potri.018G065300' => 'ptr', 'Pp3c1_20770' => 'ppa', 'Pp3c20_10450' => 'ppa', 'Pp3c23_16880' => 'ppa', 'PRCOL_00003597' => 'pco', 'Prupe.5G020900' => 'ppe', 'Prupe.5G205700' => 'ppe', 'Prupe.7G202500' => 'ppe', 'Psat1g132720' => 'psa', 'Psat2g142080' => 'psa', 'Psat4g047800' => 'psa', 'PSO017G4603' => 'pso', 'PSO063G1428' => 'pso', 'PSO063G2170' => 'pso', 'PSO063G2983' => 'pso', 'PSO063G4795' => 'pso', 'PSO210G0233' => 'pso', 'PSO210G5735' => 'pso', 'PSO478G2603' => 'pso', 'PSO731G0068' => 'pso', 'PSO782G4142' => 'pso', 'QL02p061033' => 'qlo', 'QL10p019699' => 'qlo', 'QL12p000754' => 'qlo', 'QL12p000778' => 'qlo', 'RcHm_v2.0_Chr2g0094351' => 'rch', 'RcHm_v2.0_Chr2g0106871' => 'rch', 'RcHm_v2.0_Chr4g0402291' => 'rch', 'RcHm_v2.0_Chr5g0032071' => 'rch', 'RcHm_v2.0_Chr5g0038981' => 'rch', 'RcHm_v2.0_Chr7g0183161' => 'rch', 'RcHm_v2.0_Chr7g0207931' => 'rch', 'RcHm_v2.0_Chr7g0213381' => 'rch', 'Rhsim05G0012100' => 'rsi', 'Rhsim05G0012200' => 'rsi', 'Rhsim05G0012300' => 'rsi', 'Rhsim08G0145600' => 'rsi', 'Rhsim11G0025300' => 'rsi', 'Rhsim11G0025400' => 'rsi', 'RhsimUnG0172500' => 'rsi', 'Sabra03G0069900' => 'sbr', 'Sabra06G0112600' => 'sbr', 'Sabra06G0113900' => 'sbr', 'Sabra15G0082600' => 'sbr', 'Sabra15G0083000' => 'sbr', 'Sabra18G0057900' => 'sbr', 'Sc01g0007020' => 'sci', 'Sc04g0004360' => 'sci', 'Sc19g0001900' => 'sci', 'Sed0000920' => 'sed', 'Sed0015067' => 'sed', 'Sed0022878' => 'sed', 'Sed0027547' => 'sed', 'SEGI_00003' => 'sgi', 'SEGI_00361' => 'sgi', 'SEGI_00679' => 'sgi', 'SEGI_00714' => 'sgi', 'SEGI_01198' => 'sgi', 'SEGI_01245' => 'sgi', 'SEGI_01360' => 'sgi', 'SEGI_01683' => 'sgi', 'SEGI_01959' => 'sgi', 'SEGI_02614' => 'sgi', 'SEGI_02685' => 'sgi', 'SEGI_02882' => 'sgi', 'SEGI_02899' => 'sgi', 'SEGI_03718' => 'sgi', 'SEGI_04497' => 'sgi', 'SEGI_04520' => 'sgi', 'SEGI_04795' => 'sgi', 'SEGI_05071' => 'sgi', 'SEGI_05176' => 'sgi', 'SEGI_05651' => 'sgi', 'SEGI_05771' => 'sgi', 'SEGI_06287' => 'sgi', 'SEGI_06336' => 'sgi', 'SEGI_06573' => 'sgi', 'SEGI_06635' => 'sgi', 'SEGI_06941' => 'sgi', 'SEGI_07067' => 'sgi', 'SEGI_07193' => 'sgi', 'SEGI_08053' => 'sgi', 'SEGI_08060' => 'sgi', 'SEGI_08111' => 'sgi', 'SEGI_08146' => 'sgi', 'SEGI_08283' => 'sgi', 'SEGI_08943' => 'sgi', 'SEGI_09316' => 'sgi', 'SEGI_09631' => 'sgi', 'SEGI_09636' => 'sgi', 'SEGI_09821' => 'sgi', 'SEGI_09861' => 'sgi', 'SEGI_09929' => 'sgi', 'SEGI_10600' => 'sgi', 'SEGI_11169' => 'sgi', 'SEGI_11783' => 'sgi', 'SEGI_11933' => 'sgi', 'SEGI_12188' => 'sgi', 'SEGI_12360' => 'sgi', 'SEGI_12473' => 'sgi', 'SEGI_13329' => 'sgi', 'SEGI_13680' => 'sgi', 'SEGI_13841' => 'sgi', 'SEGI_13896' => 'sgi', 'SEGI_14062' => 'sgi', 'SEGI_14230' => 'sgi', 'SEGI_14260' => 'sgi', 'SEGI_14935' => 'sgi', 'SEGI_14940' => 'sgi', 'SEGI_15192' => 'sgi', 'SEGI_15535' => 'sgi', 'SEGI_15741' => 'sgi', 'SEGI_16125' => 'sgi', 'SEGI_16242' => 'sgi', 'SEGI_16358' => 'sgi', 'SEGI_16500' => 'sgi', 'SEGI_16551' => 'sgi', 'SEGI_16615' => 'sgi', 'SEGI_16686' => 'sgi', 'SEGI_16695' => 'sgi', 'SEGI_17357' => 'sgi', 'SEGI_17394' => 'sgi', 'SEGI_17447' => 'sgi', 'SEGI_17936' => 'sgi', 'SEGI_17969' => 'sgi', 'SEGI_18072' => 'sgi', 'SEGI_18457' => 'sgi', 'SEGI_18576' => 'sgi', 'SEGI_18847' => 'sgi', 'SEGI_18898' => 'sgi', 'SEGI_19719' => 'sgi', 'SEGI_19975' => 'sgi', 'SEGI_20150' => 'sgi', 'SEGI_20194' => 'sgi', 'SEGI_20228' => 'sgi', 'SEGI_20289' => 'sgi', 'SEGI_20391' => 'sgi', 'SEGI_20626' => 'sgi', 'SEGI_20679' => 'sgi', 'SEGI_20798' => 'sgi', 'SEGI_21076' => 'sgi', 'SEGI_21469' => 'sgi', 'SEGI_21480' => 'sgi', 'SEGI_21533' => 'sgi', 'SEGI_21607' => 'sgi', 'SEGI_21687' => 'sgi', 'SEGI_21743' => 'sgi', 'SEGI_21806' => 'sgi', 'SEGI_22147' => 'sgi', 'SEGI_22182' => 'sgi', 'SEGI_22206' => 'sgi', 'SEGI_22436' => 'sgi', 'SEGI_22572' => 'sgi', 'SEGI_22792' => 'sgi', 'SEGI_23016' => 'sgi', 'SEGI_23133' => 'sgi', 'SEGI_23378' => 'sgi', 'SEGI_23554' => 'sgi', 'SEGI_23604' => 'sgi', 'SEGI_23854' => 'sgi', 'SEGI_23982' => 'sgi', 'SEGI_24178' => 'sgi', 'SEGI_24246' => 'sgi', 'SEGI_24393' => 'sgi', 'SEGI_24448' => 'sgi', 'SEGI_24539' => 'sgi', 'SEGI_24734' => 'sgi', 'SEGI_25221' => 'sgi', 'SEGI_25449' => 'sgi', 'SEGI_25588' => 'sgi', 'SEGI_25675' => 'sgi', 'SEGI_25824' => 'sgi', 'SEGI_26141' => 'sgi', 'SEGI_26459' => 'sgi', 'SEGI_26730' => 'sgi', 'SEGI_27216' => 'sgi', 'SEGI_27643' => 'sgi', 'SEGI_28292' => 'sgi', 'SEGI_28593' => 'sgi', 'SEGI_28848' => 'sgi', 'SEGI_28956' => 'sgi', 'SEGI_29792' => 'sgi', 'SEGI_29899' => 'sgi', 'SEGI_30527' => 'sgi', 'SEGI_30904' => 'sgi', 'SEGI_30909' => 'sgi', 'SEGI_31235' => 'sgi', 'SEGI_31280' => 'sgi', 'SEGI_31410' => 'sgi', 'SEGI_31607' => 'sgi', 'SEGI_31649' => 'sgi', 'SEGI_31866' => 'sgi', 'SEGI_31907' => 'sgi', 'SEGI_32074' => 'sgi', 'SEGI_32223' => 'sgi', 'SEGI_32376' => 'sgi', 'SEGI_32406' => 'sgi', 'SEGI_32808' => 'sgi', 'SEGI_32947' => 'sgi', 'SEGI_33261' => 'sgi', 'SEGI_33525' => 'sgi', 'SEGI_33528' => 'sgi', 'SEGI_33546' => 'sgi', 'SEGI_33591' => 'sgi', 'SEGI_33676' => 'sgi', 'SEGI_33910' => 'sgi', 'SEGI_34155' => 'sgi', 'SEGI_34291' => 'sgi', 'SEGI_34315' => 'sgi', 'SEGI_34598' => 'sgi', 'SEGI_34761' => 'sgi', 'SEGI_34835' => 'sgi', 'SEGI_34998' => 'sgi', 'SEGI_35352' => 'sgi', 'SEGI_35512' => 'sgi', 'SEGI_35552' => 'sgi', 'SEGI_35732' => 'sgi', 'SEGI_36143' => 'sgi', 'SEGI_36496' => 'sgi', 'SEGI_36527' => 'sgi', 'SEGI_36585' => 'sgi', 'SEGI_36652' => 'sgi', 'SEGI_37497' => 'sgi', 'SEGI_37981' => 'sgi', 'SEGI_38047' => 'sgi', 'SEGI_38212' => 'sgi', 'SEGI_38690' => 'sgi', 'SEGI_38907' => 'sgi', 'SEGI_39067' => 'sgi', 'SEGI_39240' => 'sgi', 'SEGI_39273' => 'sgi', 'SEGI_39914' => 'sgi', 'SEGI_39946' => 'sgi', 'SEGI_40163' => 'sgi', 'SEGI_40188' => 'sgi', 'SEGI_40657' => 'sgi', 'SEGI_40735' => 'sgi', 'SEGI_40772' => 'sgi', 'SEGI_40900' => 'sgi', 'SEGI_41144' => 'sgi', 'SEGI_41182' => 'sgi', 'SEGI_41224' => 'sgi', 'SGA_v2.0_scaffold25G10955' => 'sas', 'SGA_v2.0_scaffold28G11745' => 'sas', 'SGA_v2.0_scaffold333G49017' => 'sas', 'SGA_v2.0_scaffold89G27397' => 'sas', 'SGA_v2.0_scaffold91G28086' => 'sas', 'SGA_v2.0_scaffold96G29068' => 'sas', 'SGA_v2.0_scaffold96G29069' => 'sas', 'SHI07207' => 'shi', 'SHI27089' => 'shi', 'SHI27090' => 'shi', 'SMO026G0001' => 'smo', 'SMO062G0004' => 'smo', 'SMO109G0004' => 'smo', 'SMO112G0064' => 'smo', 'SMO115G0028' => 'smo', 'SMO116G0284' => 'smo', 'SMO119G0217' => 'smo', 'SMO122G0012' => 'smo', 'SMO134G0024' => 'smo', 'SMO137G0045' => 'smo', 'SMO146G0099' => 'smo', 'SMO159G0007' => 'smo', 'SMO169G0286' => 'smo', 'SMO174G0100' => 'smo', 'SMO183G0002' => 'smo', 'SMO202G0046' => 'smo', 'SMO274G0007' => 'smo', 'SMO286G0019' => 'smo', 'SMO320G0001' => 'smo', 'SMO321G0001' => 'smo', 'SMO342G0003' => 'smo', 'SMO354G0006' => 'smo', 'SMO358G0534' => 'smo', 'SMO360G0011' => 'smo', 'SMO364G0527' => 'smo', 'SMO364G0729' => 'smo', 'SMO367G1049' => 'smo', 'Solyc03g115050.3' => 'sly', 'Solyc05g025590.4' => 'sly', 'Solyc08g075840.3' => 'sly', 'Sopen03g034120' => 'spe', 'Sopen05g020190' => 'spe', 'Sopen08g024480' => 'spe', 'Sp2g10350' => 'spa', 'Sp2g24310' => 'spa', 'Sp3g24710' => 'spa', 'Sp6g34920' => 'spa', 'Sp7g17830' => 'spa', 'TAR063G0004' => 'tar', 'TAR091G0002' => 'tar', 'TAR371G0114' => 'tar', 'TAR371G0671' => 'tar', 'TAR374G1226' => 'tar', 'TAR375G1100' => 'tar', 'TAR622G0908' => 'tar', 'TAR624G0651' => 'tar', 'TAR625G0518' => 'tar', 'TAR629G0759' => 'tar', 'TAR629G1891' => 'tar', 'THA.LOC104804633' => 'tha', 'THA.LOC104806192' => 'tha', 'THA.LOC104819400' => 'tha', 'THA.LOC104826582' => 'tha', 'Thecc.03G102500' => 'tca', 'Thecc.03G317500' => 'tca', 'Thecc.09G080300' => 'tca', 'Thecc.09G080500' => 'tca', 'Thhalv10000781m.g' => 'esa', 'Thhalv10001929m.g' => 'esa', 'Thhalv10003822m.g' => 'esa', 'Thhalv10013014m.g' => 'esa', 'Thhalv10024555m.g' => 'esa', 'TPR.G10916' => 'tpr', 'TPR.G15686' => 'tpr', 'TPR.G17277' => 'tpr', 'TPR.G20024' => 'tpr', 'TPR.G2021' => 'tpr', 'TPR.G29493' => 'tpr', 'TWI34G1166' => 'twi', 'TWI36G1694' => 'twi', 'TWI56G1436' => 'twi', 'TWI81G1098' => 'twi', 'unitig_22.g5102' => 'ugi', 'unitig_62.g23555' => 'ugi', 'vmacro00064' => 'vma', 'vmacro17144' => 'vma', 'vmacro17181' => 'vma', 'vmacro17211' => 'vma', 'vmacro17614' => 'vma', 'vmacro19552' => 'vma', 'vmacro19553' => 'vma', 'VMungo0720G0183' => 'vmu', 'VMungo1215G0840' => 'vmu', 'VMungo1215G1142' => 'vmu', 'VMungo1309G1355' => 'vmu', 'Zm00001eb008630' => 'zma', 'Zm00001eb193190' => 'zma', 'Zm00001eb266890' => 'zma', 'Zm00001eb282530' => 'zma', 'Zm00001eb400180' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D000824' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000824' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D000824' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000824' )
include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Notice (8): Trying to access array offset on value of type null [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000824', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '721', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p33820' => 'bna', 'A01p33830' => 'bna', 'A01p33840' => 'bna', 'A02p29120' => 'bna', 'A03p03540' => 'bna', 'A03p46710' => 'bna', 'A03p51740' => 'bna', 'A07p06210' => 'bna', 'A09p07190' => 'bna', 'A09p21780' => 'bna', 'Aa31LG3G18510' => 'aar', 'Aa31LG6G1820' => 'aar', 'Aa31LG8G11780' => 'aar', 'Aa31LG9G7600' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2389' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.479' => 'aag', 'Actinidia01266' => 'ach', 'Actinidia04822' => 'ach', 'Actinidia16130' => 'ach', 'Actinidia16131' => 'ach', 'Actinidia16537' => 'ach', 'Actinidia32773' => 'ach', 'Actinidia39675' => 'ach', 'Ah.02g114080' => 'amhyb', 'Ah.07g201170' => 'amhyb', 'Ah.09g231350' => 'amhyb', 'Ah.11g047720' => 'amhyb', 'Ah.12g055800' => 'amhyb', 'AL1G45720' => 'aly', 'AL3G43800' => 'aly', 'AL6G18370' => 'aly', 'AL6G18410' => 'aly', 'AL6G19570' => 'aly', 'AL7G34960' => 'aly', 'AL8G37660' => 'aly', 'Aqoxy1G03346' => 'aox', 'Aqoxy3G02011' => 'aox', 'Aqoxy3G02012' => 'aox', 'Aqoxy3G02013' => 'aox', 'Aqoxy3G03684' => 'aox', 'Aqoxy4G01721' => 'aox', 'Aqoxy4G01813' => 'aox', 'Aqoxy6G02323' => 'aox', 'Aqoxy7G02240' => 'aox', 'Aqoxy7G04110' => 'aox', 'Aqoxy7G04112' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04BWFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71ADJA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79SD3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D7TWRW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3U0AR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J8WCL7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RQXR03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7GC2W' => 'arhy', 'AT2G06510' => 'ath', 'AT4G19130' => 'ath', 'AT5G08020' => 'ath', 'AT5G45400' => 'ath', 'AT5G61000' => 'ath', 'ATR0177G023' => 'atr', 'ATR0598G158' => 'atr', 'ATR0829G100' => 'atr', 'ATR0829G214' => 'atr', 'Atru.chr7.1669' => 'acertr', 'Atru.chr7.1670' => 'acertr', 'Atru.chr7.1671' => 'acertr', 'Atru.chr8.1429' => 'acertr', 'Atru.chr8.1430' => 'acertr', 'Atru.chr9.564' => 'acertr', 'AUR62007386' => 'cqu', 'AUR62008537' => 'cqu', 'AUR62018601' => 'cqu', 'AUR62021554' => 'cqu', 'AUR62025182' => 'cqu', 'AUR62028992' => 'cqu', 'BcaB01g05642' => 'bca', 'BcaB01g05683' => 'bca', 'BcaB02g09847' => 'bca', 'BcaB07g30456' => 'bca', 'BcaB07g30884' => 'bca', 'BcaB08g37297' => 'bca', 'BcaC04g21762' => 'bca', 'BcaC04g23467' => 'bca', 'BcaC05g24775' => 'bca', 'BcaC06g30610' => 'bca', 'BcaC06g32889' => 'bca', 'BcaC06g33184' => 'bca', 'BcaC06g35976' => 'bca', 'BcaC09g50885' => 'bca', 'BcaNung03077' => 'bca', 'BcaNung06900' => 'bca', 'BolC1t03820H' => 'bol', 'BolC2t10676H' => 'bol', 'BolC3t12936H' => 'bol', 'BolC5t29475H' => 'bol', 'BolC7t41345H' => 'bol', 'BolC7t44999H' => 'bol', 'BolC7t45528H' => 'bol', 'BolC7t45846H' => 'bol', 'BolC9t53717H' => 'bol', 'BolC9t55651H' => 'bol', 'BraA02t07945Z' => 'bra', 'BraA03t09704Z' => 'bra', 'BraA03t13794Z' => 'bra', 'BraA03t14263Z' => 'bra', 'BraA07t28419Z' => 'bra', 'BraA09t36368Z' => 'bra', 'BraA09t37781Z' => 'bra', 'C01p38580' => 'bna', 'C02p46200' => 'bna', 'C03p03990' => 'bna', 'C05p07210' => 'bna', 'C07p09270' => 'bna', 'C07p44760' => 'bna', 'C07p50260' => 'bna', 'C09p08030' => 'bna', 'C09p27880' => 'bna', 'CAN.G1228.20' => 'can', 'CAN.G1427.10' => 'can', 'CAN.G148.16' => 'can', 'CAN.G227.6' => 'can', 'CANSAT01G1154' => 'cansat', 'CANSAT54G1889' => 'cansat', 'CANSAT56G3947' => 'cansat', 'CANSAT80G1236' => 'cansat', 'CARHR103830' => 'chi', 'CARHR176670' => 'chi', 'CARHR205160' => 'chi', 'CARHR274710' => 'chi', 'Carub.0003s2727' => 'cru', 'Carub.0006s0691' => 'cru', 'Carub.0007s2202' => 'cru', 'Carub.0008s0271' => 'cru', 'Carub.0008s2169' => 'cru', 'Ca_13349_v3' => 'car', 'Ca_21769_v3' => 'car', 'Ca_21770_v3' => 'car', 'Ca_25103_v3' => 'car', 'CBR_g23266' => 'cbr', 'CBR_g36292' => 'cbr', 'CBR_g37119' => 'cbr', 'CBR_g55372' => 'cbr', 'Cc00_g07660' => 'ccan', 'Cc06_g11960' => 'ccan', 'Cc08_g05150' => 'ccan', 'CDE01G0675' => 'cde', 'CDE02G4126' => 'cde', 'CDE06G1892' => 'cde', 'CDE11G0897' => 'cde', 'CDE12G0883' => 'cde', 'Cfa003026' => 'cfa', 'Cfa012589' => 'cfa', 'Cfa019342' => 'cfa', 'Cfa025402' => 'cfa', 'Ciclev10000254m.g' => 'ccl', 'Ciclev10009939m.g' => 'ccl', 'Ciclev10010492m.g' => 'ccl', 'Ciclev10019317m.g' => 'ccl', 'CiPaw.03G209600' => 'cil', 'CiPaw.11G054100' => 'cil', 'CiPaw.11G103100' => 'cil', 'ClCG06G015600' => 'cla', 'ClCG10G001050' => 'cla', 'ClCG11G001530' => 'cla', 'COL.COLO4_06851' => 'col', 'COL.COLO4_14060' => 'col', 'COL.COLO4_18126' => 'col', 'COL.COLO4_32275' => 'col', 'Cpa.g.sc1086.1' => 'cpa', 'Cpa.g.sc137.10' => 'cpa', 'Cpa.g.sc137.11' => 'cpa', 'Cpa.g.sc28.78' => 'cpa', 'Cre16.g651000' => 'cre', 'Cre17.g718850' => 'cre', 'CsaV3_1G002970' => 'csa', 'CsaV3_2G001260' => 'csa', 'CsaV3_3G001070' => 'csa', 'CSS0005493' => 'camsi', 'CSS0007192' => 'camsi', 'CSS0009813' => 'camsi', 'CSS0020965' => 'camsi', 'CSS0031599' => 'camsi', 'CSS0032107' => 'camsi', 'CSS0033943' => 'camsi', 'CSS0043196' => 'camsi', 'DCAR_004240' => 'dca', 'DCAR_011568' => 'dca', 'DCAR_011569' => 'dca', 'DCAR_023168' => 'dca', 'DCAR_028290' => 'dca', 'Dinv06490' => 'din', 'Dinv08250' => 'din', 'Dinv08482' => 'din', 'Dinv10520' => 'din', 'Dinv17419' => 'din', 'Dinv19531' => 'din', 'Dinv22755' => 'din', 'Dinv22775' => 'din', 'Dinv22867' => 'din', 'Dinv26272' => 'din', 'Dinv26739' => 'din', 'Dinv28015' => 'din', 'Dinv30925' => 'din', 'Dinv41987' => 'din', 'Dinv42372' => 'din', 'Duzib084G0695' => 'dzi', 'Duzib168G1443' => 'dzi', 'Duzib205G0152' => 'dzi', 'Duzib205G1830' => 'dzi', 'ECA240G2629' => 'eca', 'ECA240G4292' => 'eca', 'ECA246G1424' => 'eca', 'ECA246G1912' => 'eca', 'ECA246G2513' => 'eca', 'ECA246G3369' => 'eca', 'ECA247G3309' => 'eca', 'EL10Ac5g11138' => 'bvu', 'EL10Ac5g11968' => 'bvu', 'EL10Ac8g19115' => 'bvu', 'Eucgr.B00599' => 'egr', 'Eucgr.B00601' => 'egr', 'Eucgr.C03561' => 'egr', 'Eucgr.D02593' => 'egr', 'FAN04G2448' => 'fan', 'FAN08G1674' => 'fan', 'FAN08G2719' => 'fan', 'FAN13G0731' => 'fan', 'FAN13G2002' => 'fan', 'FAN18G2954' => 'fan', 'FAN18G3561' => 'fan', 'FAN18G4284' => 'fan', 'FAN19G2973' => 'fan', 'FAN23G0408' => 'fan', 'FAN26G2759' => 'fan', 'FAN26G2843' => 'fan', 'FvH4_1g08261' => 'fve', 'FvH4_5g13771' => 'fve', 'FvH4_5g23941' => 'fve', 'Glyma.05G020600' => 'gma', 'Glyma.09G213300' => 'gma', 'Glyma.09G213500' => 'gma', 'Glyma.15G174100' => 'gma', 'Glyma.17G078700' => 'gma', 'Gohir.A03G070300' => 'ghi', 'Gohir.A12G202700' => 'ghi', 'Gohir.A13G191600' => 'ghi', 'Gohir.D03G096700' => 'ghi', 'Gohir.D12G205400' => 'ghi', 'Gohir.D13G197000' => 'ghi', 'Gorai.003G101500' => 'gra', 'Gorai.008G220300' => 'gra', 'Gorai.013G225700' => 'gra', 'GSVIVG01002032001' => 'vvi', 'GSVIVG01007849001' => 'vvi', 'GSVIVG01014617001' => 'vvi', 'GSVIVG01014619001' => 'vvi', 'GSVIVG01015111001' => 'vvi', 'GSVIVG01020590001' => 'vvi', 'GSVIVG01022784001' => 'vvi', 'GSVIVG01023662001' => 'vvi', 'GSVIVG01023663001' => 'vvi', 'GSVIVG01032319001' => 'vvi', 'GSVIVG01032320001' => 'vvi', 'GSVIVG01035135001' => 'vvi', 'GSVIVG01037062001' => 'vvi', 'GSVIVG01037063001' => 'vvi', 'HanXRQChr02g0044771' => 'han', 'HanXRQChr03g0081181' => 'han', 'HanXRQChr10g0300431' => 'han', 'HanXRQChr10g0300451' => 'han', 'HanXRQChr10g0319611' => 'han', 'HanXRQChr16g0517661' => 'han', 'HanXRQChr17g0539191' => 'han', 'Haze_07734' => 'cav', 'Haze_08068' => 'cav', 'Haze_25975' => 'cav', 'Hma1.2p1_0060F.1_g033050' => 'hma', 'Hma1.2p1_0544F.1_g175470' => 'hma', 'HPP92_012596' => 'vpl', 'HPP92_014050' => 'vpl', 'HPP92_014304' => 'vpl', 'HPP92_019327' => 'vpl', 'Hund02583' => 'sun', 'Hund09917' => 'sun', 'Hund11146' => 'sun', 'Hund26003' => 'sun', 'Lalb_Chr08g0232511' => 'lal', 'Lalb_Chr12g0197221' => 'lal', 'Lalb_Chr13g0302831' => 'lal', 'Lalb_Chr16g0380751' => 'lal', 'Lj2g0016644' => 'lja', 'Lj2g0019271' => 'lja', 'Lj4A909T87' => 'lonja', 'Lj4C905G6' => 'lonja', 'Lj4C909T19' => 'lonja', 'Lj4g0011361' => 'lja', 'Lj4g0021262' => 'lja', 'Lj5A102T96' => 'lonja', 'Lj6g0016995' => 'lja', 'Lj8C334G12' => 'lonja', 'Lj9C471T8' => 'lonja', 'Lsat_1_v5_gn_1_14461' => 'lsa', 'Lsat_1_v5_gn_3_26741' => 'lsa', 'Lsat_1_v5_gn_3_26761' => 'lsa', 'Lsat_1_v5_gn_5_141780' => 'lsa', 'Lsat_1_v5_gn_5_58221' => 'lsa', 'Lsat_1_v5_gn_5_58641' => 'lsa', 'Manes.03G038600' => 'mes', 'Manes.06G084200' => 'mes', 'Manes.17G003800' => 'mes', 'Manes.17G004337' => 'mes', 'Mapoly0109s0044' => 'mpo', 'Mapoly0125s0021' => 'mpo', 'MBI04_g27279_MAGBIO' => 'mbi', 'MBI07_g08573_MAGBIO' => 'mbi', 'MBI07_g46481_MAGBIO' => 'mbi', 'MBI11_g43227_MAGBIO' => 'mbi', 'MBI13_g21846_MAGBIO' => 'mbi', 'MBI17_g04594_MAGBIO' => 'mbi', 'MBI19_g11847_MAGBIO' => 'mbi', 'MCO07G139' => 'mco', 'MCO09G242' => 'mco', 'MD00G1001700' => 'mdo', 'MD02G1087200' => 'mdo', 'MD06G1015200' => 'mdo', 'MD06G1225500' => 'mdo', 'MD14G1212400' => 'mdo', 'MD15G1214800' => 'mdo', 'Medtr1g095050' => 'mtr', 'Medtr2g041270' => 'mtr', 'Medtr3g047950' => 'mtr', 'Medtr4g064240' => 'mtr', 'Medtr4g109580' => 'mtr', 'Medtr4g109590' => 'mtr', 'Medtr5g026880' => 'mtr', 'Medtr5g048670' => 'mtr', 'MELO3C004643.2' => 'cme', 'MELO3C013797.2' => 'cme', 'MELO3C017228.2' => 'cme', 'Migut.A00558' => 'egut', 'Migut.I00367' => 'egut', 'Migut.J00947' => 'egut', 'MSTRG.11337' => 'ama', 'MSTRG.22957' => 'ama', 'MSTRG.25728' => 'ama', 'Nitab4.5_0000024g0120' => 'nta', 'Nitab4.5_0000108g0410' => 'nta', 'Nitab4.5_0001485g0110' => 'nta', 'Nitab4.5_0003992g0030' => 'nta', 'Nitab4.5_0006563g0010' => 'nta', 'Nitab4.5_0009401g0060' => 'nta', 'Nn1g02070' => 'nnu', 'Nn3g17458' => 'nnu', 'Nn4g23436' => 'nnu', 'Nn5g28104' => 'nnu', 'Nn8g38709' => 'nnu', 'Nn8g40648' => 'nnu', 'Oeu017324.1' => 'oeu', 'Oeu042211.1' => 'oeu', 'Oeu044875.1' => 'oeu', 'Oeu061166.1' => 'oeu', 'Os02g0776800' => 'osa', 'Os03g0214100' => 'osa', 'Os05g0111000' => 'osa', 'Peaxi162Scf00201g00330' => 'pax', 'Peaxi162Scf00408g00837' => 'pax', 'Peaxi162Scf00724g00059' => 'pax', 'PGR031G2041' => 'pgr', 'PGR031G3208' => 'pgr', 'PGR044G0832' => 'pgr', 'PGR083G2843' => 'pgr', 'PGSC0003DMG400024634' => 'stu', 'PGSC0003DMG400030860' => 'stu', 'PGSC0003DMG400044420' => 'stu', 'Phvul.002G128800' => 'pvu', 'Phvul.003G184400' => 'pvu', 'Phvul.009G228500' => 'pvu', 'Potri.003G102700' => 'ptr', 'Potri.015G057300' => 'ptr', 'Potri.018G065300' => 'ptr', 'Pp3c1_20770' => 'ppa', 'Pp3c20_10450' => 'ppa', 'Pp3c23_16880' => 'ppa', 'PRCOL_00003597' => 'pco', 'Prupe.5G020900' => 'ppe', 'Prupe.5G205700' => 'ppe', 'Prupe.7G202500' => 'ppe', 'Psat1g132720' => 'psa', 'Psat2g142080' => 'psa', 'Psat4g047800' => 'psa', 'PSO017G4603' => 'pso', 'PSO063G1428' => 'pso', 'PSO063G2170' => 'pso', 'PSO063G2983' => 'pso', 'PSO063G4795' => 'pso', 'PSO210G0233' => 'pso', 'PSO210G5735' => 'pso', 'PSO478G2603' => 'pso', 'PSO731G0068' => 'pso', 'PSO782G4142' => 'pso', 'QL02p061033' => 'qlo', 'QL10p019699' => 'qlo', 'QL12p000754' => 'qlo', 'QL12p000778' => 'qlo', 'RcHm_v2.0_Chr2g0094351' => 'rch', 'RcHm_v2.0_Chr2g0106871' => 'rch', 'RcHm_v2.0_Chr4g0402291' => 'rch', 'RcHm_v2.0_Chr5g0032071' => 'rch', 'RcHm_v2.0_Chr5g0038981' => 'rch', 'RcHm_v2.0_Chr7g0183161' => 'rch', 'RcHm_v2.0_Chr7g0207931' => 'rch', 'RcHm_v2.0_Chr7g0213381' => 'rch', 'Rhsim05G0012100' => 'rsi', 'Rhsim05G0012200' => 'rsi', 'Rhsim05G0012300' => 'rsi', 'Rhsim08G0145600' => 'rsi', 'Rhsim11G0025300' => 'rsi', 'Rhsim11G0025400' => 'rsi', 'RhsimUnG0172500' => 'rsi', 'Sabra03G0069900' => 'sbr', 'Sabra06G0112600' => 'sbr', 'Sabra06G0113900' => 'sbr', 'Sabra15G0082600' => 'sbr', 'Sabra15G0083000' => 'sbr', 'Sabra18G0057900' => 'sbr', 'Sc01g0007020' => 'sci', 'Sc04g0004360' => 'sci', 'Sc19g0001900' => 'sci', 'Sed0000920' => 'sed', 'Sed0015067' => 'sed', 'Sed0022878' => 'sed', 'Sed0027547' => 'sed', 'SEGI_00003' => 'sgi', 'SEGI_00361' => 'sgi', 'SEGI_00679' => 'sgi', 'SEGI_00714' => 'sgi', 'SEGI_01198' => 'sgi', 'SEGI_01245' => 'sgi', 'SEGI_01360' => 'sgi', 'SEGI_01683' => 'sgi', 'SEGI_01959' => 'sgi', 'SEGI_02614' => 'sgi', 'SEGI_02685' => 'sgi', 'SEGI_02882' => 'sgi', 'SEGI_02899' => 'sgi', 'SEGI_03718' => 'sgi', 'SEGI_04497' => 'sgi', 'SEGI_04520' => 'sgi', 'SEGI_04795' => 'sgi', 'SEGI_05071' => 'sgi', 'SEGI_05176' => 'sgi', 'SEGI_05651' => 'sgi', 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'SEGI_16551' => 'sgi', 'SEGI_16615' => 'sgi', 'SEGI_16686' => 'sgi', 'SEGI_16695' => 'sgi', 'SEGI_17357' => 'sgi', 'SEGI_17394' => 'sgi', 'SEGI_17447' => 'sgi', 'SEGI_17936' => 'sgi', 'SEGI_17969' => 'sgi', 'SEGI_18072' => 'sgi', 'SEGI_18457' => 'sgi', 'SEGI_18576' => 'sgi', 'SEGI_18847' => 'sgi', 'SEGI_18898' => 'sgi', 'SEGI_19719' => 'sgi', 'SEGI_19975' => 'sgi', 'SEGI_20150' => 'sgi', 'SEGI_20194' => 'sgi', 'SEGI_20228' => 'sgi', 'SEGI_20289' => 'sgi', 'SEGI_20391' => 'sgi', 'SEGI_20626' => 'sgi', 'SEGI_20679' => 'sgi', 'SEGI_20798' => 'sgi', 'SEGI_21076' => 'sgi', 'SEGI_21469' => 'sgi', 'SEGI_21480' => 'sgi', 'SEGI_21533' => 'sgi', 'SEGI_21607' => 'sgi', 'SEGI_21687' => 'sgi', 'SEGI_21743' => 'sgi', 'SEGI_21806' => 'sgi', 'SEGI_22147' => 'sgi', 'SEGI_22182' => 'sgi', 'SEGI_22206' => 'sgi', 'SEGI_22436' => 'sgi', 'SEGI_22572' => 'sgi', 'SEGI_22792' => 'sgi', 'SEGI_23016' => 'sgi', 'SEGI_23133' => 'sgi', 'SEGI_23378' => 'sgi', 'SEGI_23554' => 'sgi', 'SEGI_23604' => 'sgi', 'SEGI_23854' => 'sgi', 'SEGI_23982' => 'sgi', 'SEGI_24178' => 'sgi', 'SEGI_24246' => 'sgi', 'SEGI_24393' => 'sgi', 'SEGI_24448' => 'sgi', 'SEGI_24539' => 'sgi', 'SEGI_24734' => 'sgi', 'SEGI_25221' => 'sgi', 'SEGI_25449' => 'sgi', 'SEGI_25588' => 'sgi', 'SEGI_25675' => 'sgi', 'SEGI_25824' => 'sgi', 'SEGI_26141' => 'sgi', 'SEGI_26459' => 'sgi', 'SEGI_26730' => 'sgi', 'SEGI_27216' => 'sgi', 'SEGI_27643' => 'sgi', 'SEGI_28292' => 'sgi', 'SEGI_28593' => 'sgi', 'SEGI_28848' => 'sgi', 'SEGI_28956' => 'sgi', 'SEGI_29792' => 'sgi', 'SEGI_29899' => 'sgi', 'SEGI_30527' => 'sgi', 'SEGI_30904' => 'sgi', 'SEGI_30909' => 'sgi', 'SEGI_31235' => 'sgi', 'SEGI_31280' => 'sgi', 'SEGI_31410' => 'sgi', 'SEGI_31607' => 'sgi', 'SEGI_31649' => 'sgi', 'SEGI_31866' => 'sgi', 'SEGI_31907' => 'sgi', 'SEGI_32074' => 'sgi', 'SEGI_32223' => 'sgi', 'SEGI_32376' => 'sgi', 'SEGI_32406' => 'sgi', 'SEGI_32808' => 'sgi', 'SEGI_32947' => 'sgi', 'SEGI_33261' => 'sgi', 'SEGI_33525' => 'sgi', 'SEGI_33528' => 'sgi', 'SEGI_33546' => 'sgi', 'SEGI_33591' => 'sgi', 'SEGI_33676' => 'sgi', 'SEGI_33910' => 'sgi', 'SEGI_34155' => 'sgi', 'SEGI_34291' => 'sgi', 'SEGI_34315' => 'sgi', 'SEGI_34598' => 'sgi', 'SEGI_34761' => 'sgi', 'SEGI_34835' => 'sgi', 'SEGI_34998' => 'sgi', 'SEGI_35352' => 'sgi', 'SEGI_35512' => 'sgi', 'SEGI_35552' => 'sgi', 'SEGI_35732' => 'sgi', 'SEGI_36143' => 'sgi', 'SEGI_36496' => 'sgi', 'SEGI_36527' => 'sgi', 'SEGI_36585' => 'sgi', 'SEGI_36652' => 'sgi', 'SEGI_37497' => 'sgi', 'SEGI_37981' => 'sgi', 'SEGI_38047' => 'sgi', 'SEGI_38212' => 'sgi', 'SEGI_38690' => 'sgi', 'SEGI_38907' => 'sgi', 'SEGI_39067' => 'sgi', 'SEGI_39240' => 'sgi', 'SEGI_39273' => 'sgi', 'SEGI_39914' => 'sgi', 'SEGI_39946' => 'sgi', 'SEGI_40163' => 'sgi', 'SEGI_40188' => 'sgi', 'SEGI_40657' => 'sgi', 'SEGI_40735' => 'sgi', 'SEGI_40772' => 'sgi', 'SEGI_40900' => 'sgi', 'SEGI_41144' => 'sgi', 'SEGI_41182' => 'sgi', 'SEGI_41224' => 'sgi', 'SGA_v2.0_scaffold25G10955' => 'sas', 'SGA_v2.0_scaffold28G11745' => 'sas', 'SGA_v2.0_scaffold333G49017' => 'sas', 'SGA_v2.0_scaffold89G27397' => 'sas', 'SGA_v2.0_scaffold91G28086' => 'sas', 'SGA_v2.0_scaffold96G29068' => 'sas', 'SGA_v2.0_scaffold96G29069' => 'sas', 'SHI07207' => 'shi', 'SHI27089' => 'shi', 'SHI27090' => 'shi', 'SMO026G0001' => 'smo', 'SMO062G0004' => 'smo', 'SMO109G0004' => 'smo', 'SMO112G0064' => 'smo', 'SMO115G0028' => 'smo', 'SMO116G0284' => 'smo', 'SMO119G0217' => 'smo', 'SMO122G0012' => 'smo', 'SMO134G0024' => 'smo', 'SMO137G0045' => 'smo', 'SMO146G0099' => 'smo', 'SMO159G0007' => 'smo', 'SMO169G0286' => 'smo', 'SMO174G0100' => 'smo', 'SMO183G0002' => 'smo', 'SMO202G0046' => 'smo', 'SMO274G0007' => 'smo', 'SMO286G0019' => 'smo', 'SMO320G0001' => 'smo', 'SMO321G0001' => 'smo', 'SMO342G0003' => 'smo', 'SMO354G0006' => 'smo', 'SMO358G0534' => 'smo', 'SMO360G0011' => 'smo', 'SMO364G0527' => 'smo', 'SMO364G0729' => 'smo', 'SMO367G1049' => 'smo', 'Solyc03g115050.3' => 'sly', 'Solyc05g025590.4' => 'sly', 'Solyc08g075840.3' => 'sly', 'Sopen03g034120' => 'spe', 'Sopen05g020190' => 'spe', 'Sopen08g024480' => 'spe', 'Sp2g10350' => 'spa', 'Sp2g24310' => 'spa', 'Sp3g24710' => 'spa', 'Sp6g34920' => 'spa', 'Sp7g17830' => 'spa', 'TAR063G0004' => 'tar', 'TAR091G0002' => 'tar', 'TAR371G0114' => 'tar', 'TAR371G0671' => 'tar', 'TAR374G1226' => 'tar', 'TAR375G1100' => 'tar', 'TAR622G0908' => 'tar', 'TAR624G0651' => 'tar', 'TAR625G0518' => 'tar', 'TAR629G0759' => 'tar', 'TAR629G1891' => 'tar', 'THA.LOC104804633' => 'tha', 'THA.LOC104806192' => 'tha', 'THA.LOC104819400' => 'tha', 'THA.LOC104826582' => 'tha', 'Thecc.03G102500' => 'tca', 'Thecc.03G317500' => 'tca', 'Thecc.09G080300' => 'tca', 'Thecc.09G080500' => 'tca', 'Thhalv10000781m.g' => 'esa', 'Thhalv10001929m.g' => 'esa', 'Thhalv10003822m.g' => 'esa', 'Thhalv10013014m.g' => 'esa', 'Thhalv10024555m.g' => 'esa', 'TPR.G10916' => 'tpr', 'TPR.G15686' => 'tpr', 'TPR.G17277' => 'tpr', 'TPR.G20024' => 'tpr', 'TPR.G2021' => 'tpr', 'TPR.G29493' => 'tpr', 'TWI34G1166' => 'twi', 'TWI36G1694' => 'twi', 'TWI56G1436' => 'twi', 'TWI81G1098' => 'twi', 'unitig_22.g5102' => 'ugi', 'unitig_62.g23555' => 'ugi', 'vmacro00064' => 'vma', 'vmacro17144' => 'vma', 'vmacro17181' => 'vma', 'vmacro17211' => 'vma', 'vmacro17614' => 'vma', 'vmacro19552' => 'vma', 'vmacro19553' => 'vma', 'VMungo0720G0183' => 'vmu', 'VMungo1215G0840' => 'vmu', 'VMungo1215G1142' => 'vmu', 'VMungo1309G1355' => 'vmu', 'Zm00001eb008630' => 'zma', 'Zm00001eb193190' => 'zma', 'Zm00001eb266890' => 'zma', 'Zm00001eb282530' => 'zma', 'Zm00001eb400180' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D000824', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000824' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D000824', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '721', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000824' ) ), 'genes' => array( 'A01p33820' => 'bna', 'A01p33830' => 'bna', 'A01p33840' => 'bna', 'A02p29120' => 'bna', 'A03p03540' => 'bna', 'A03p46710' => 'bna', 'A03p51740' => 'bna', 'A07p06210' => 'bna', 'A09p07190' => 'bna', 'A09p21780' => 'bna', 'Aa31LG3G18510' => 'aar', 'Aa31LG6G1820' => 'aar', 'Aa31LG8G11780' => 'aar', 'Aa31LG9G7600' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2389' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.479' => 'aag', 'Actinidia01266' => 'ach', 'Actinidia04822' => 'ach', 'Actinidia16130' => 'ach', 'Actinidia16131' => 'ach', 'Actinidia16537' => 'ach', 'Actinidia32773' => 'ach', 'Actinidia39675' => 'ach', 'Ah.02g114080' => 'amhyb', 'Ah.07g201170' => 'amhyb', 'Ah.09g231350' => 'amhyb', 'Ah.11g047720' => 'amhyb', 'Ah.12g055800' => 'amhyb', 'AL1G45720' => 'aly', 'AL3G43800' => 'aly', 'AL6G18370' => 'aly', 'AL6G18410' => 'aly', 'AL6G19570' => 'aly', 'AL7G34960' => 'aly', 'AL8G37660' => 'aly', 'Aqoxy1G03346' => 'aox', 'Aqoxy3G02011' => 'aox', 'Aqoxy3G02012' => 'aox', 'Aqoxy3G02013' => 'aox', 'Aqoxy3G03684' => 'aox', 'Aqoxy4G01721' => 'aox', 'Aqoxy4G01813' => 'aox', 'Aqoxy6G02323' => 'aox', 'Aqoxy7G02240' => 'aox', 'Aqoxy7G04110' => 'aox', 'Aqoxy7G04112' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04BWFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71ADJA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79SD3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D7TWRW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3U0AR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J8WCL7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RQXR03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7GC2W' => 'arhy', 'AT2G06510' => 'ath', 'AT4G19130' => 'ath', 'AT5G08020' => 'ath', 'AT5G45400' => 'ath', 'AT5G61000' => 'ath', 'ATR0177G023' => 'atr', 'ATR0598G158' => 'atr', 'ATR0829G100' => 'atr', 'ATR0829G214' => 'atr', 'Atru.chr7.1669' => 'acertr', 'Atru.chr7.1670' => 'acertr', 'Atru.chr7.1671' => 'acertr', 'Atru.chr8.1429' => 'acertr', 'Atru.chr8.1430' => 'acertr', 'Atru.chr9.564' => 'acertr', 'AUR62007386' => 'cqu', 'AUR62008537' => 'cqu', 'AUR62018601' => 'cqu', 'AUR62021554' => 'cqu', 'AUR62025182' => 'cqu', 'AUR62028992' => 'cqu', 'BcaB01g05642' => 'bca', 'BcaB01g05683' => 'bca', 'BcaB02g09847' => 'bca', 'BcaB07g30456' => 'bca', 'BcaB07g30884' => 'bca', 'BcaB08g37297' => 'bca', 'BcaC04g21762' => 'bca', 'BcaC04g23467' => 'bca', 'BcaC05g24775' => 'bca', 'BcaC06g30610' => 'bca', 'BcaC06g32889' => 'bca', 'BcaC06g33184' => 'bca', 'BcaC06g35976' => 'bca', 'BcaC09g50885' => 'bca', 'BcaNung03077' => 'bca', 'BcaNung06900' => 'bca', 'BolC1t03820H' => 'bol', 'BolC2t10676H' => 'bol', 'BolC3t12936H' => 'bol', 'BolC5t29475H' => 'bol', 'BolC7t41345H' => 'bol', 'BolC7t44999H' => 'bol', 'BolC7t45528H' => 'bol', 'BolC7t45846H' => 'bol', 'BolC9t53717H' => 'bol', 'BolC9t55651H' => 'bol', 'BraA02t07945Z' => 'bra', 'BraA03t09704Z' => 'bra', 'BraA03t13794Z' => 'bra', 'BraA03t14263Z' => 'bra', 'BraA07t28419Z' => 'bra', 'BraA09t36368Z' => 'bra', 'BraA09t37781Z' => 'bra', 'C01p38580' => 'bna', 'C02p46200' => 'bna', 'C03p03990' => 'bna', 'C05p07210' => 'bna', 'C07p09270' => 'bna', 'C07p44760' => 'bna', 'C07p50260' => 'bna', 'C09p08030' => 'bna', 'C09p27880' => 'bna', 'CAN.G1228.20' => 'can', 'CAN.G1427.10' => 'can', 'CAN.G148.16' => 'can', 'CAN.G227.6' => 'can', 'CANSAT01G1154' => 'cansat', 'CANSAT54G1889' => 'cansat', 'CANSAT56G3947' => 'cansat', 'CANSAT80G1236' => 'cansat', 'CARHR103830' => 'chi', 'CARHR176670' => 'chi', 'CARHR205160' => 'chi', 'CARHR274710' => 'chi', 'Carub.0003s2727' => 'cru', 'Carub.0006s0691' => 'cru', 'Carub.0007s2202' => 'cru', 'Carub.0008s0271' => 'cru', 'Carub.0008s2169' => 'cru', 'Ca_13349_v3' => 'car', 'Ca_21769_v3' => 'car', 'Ca_21770_v3' => 'car', 'Ca_25103_v3' => 'car', 'CBR_g23266' => 'cbr', 'CBR_g36292' => 'cbr', 'CBR_g37119' => 'cbr', 'CBR_g55372' => 'cbr', 'Cc00_g07660' => 'ccan', 'Cc06_g11960' => 'ccan', 'Cc08_g05150' => 'ccan', 'CDE01G0675' => 'cde', 'CDE02G4126' => 'cde', 'CDE06G1892' => 'cde', 'CDE11G0897' => 'cde', 'CDE12G0883' => 'cde', 'Cfa003026' => 'cfa', 'Cfa012589' => 'cfa', 'Cfa019342' => 'cfa', 'Cfa025402' => 'cfa', 'Ciclev10000254m.g' => 'ccl', 'Ciclev10009939m.g' => 'ccl', 'Ciclev10010492m.g' => 'ccl', 'Ciclev10019317m.g' => 'ccl', 'CiPaw.03G209600' => 'cil', 'CiPaw.11G054100' => 'cil', 'CiPaw.11G103100' => 'cil', 'ClCG06G015600' => 'cla', 'ClCG10G001050' => 'cla', 'ClCG11G001530' => 'cla', 'COL.COLO4_06851' => 'col', 'COL.COLO4_14060' => 'col', 'COL.COLO4_18126' => 'col', 'COL.COLO4_32275' => 'col', 'Cpa.g.sc1086.1' => 'cpa', 'Cpa.g.sc137.10' => 'cpa', 'Cpa.g.sc137.11' => 'cpa', 'Cpa.g.sc28.78' => 'cpa', 'Cre16.g651000' => 'cre', 'Cre17.g718850' => 'cre', 'CsaV3_1G002970' => 'csa', 'CsaV3_2G001260' => 'csa', 'CsaV3_3G001070' => 'csa', 'CSS0005493' => 'camsi', 'CSS0007192' => 'camsi', 'CSS0009813' => 'camsi', 'CSS0020965' => 'camsi', 'CSS0031599' => 'camsi', 'CSS0032107' => 'camsi', 'CSS0033943' => 'camsi', 'CSS0043196' => 'camsi', 'DCAR_004240' => 'dca', 'DCAR_011568' => 'dca', 'DCAR_011569' => 'dca', 'DCAR_023168' => 'dca', 'DCAR_028290' => 'dca', 'Dinv06490' => 'din', 'Dinv08250' => 'din', 'Dinv08482' => 'din', 'Dinv10520' => 'din', 'Dinv17419' => 'din', 'Dinv19531' => 'din', 'Dinv22755' => 'din', 'Dinv22775' => 'din', 'Dinv22867' => 'din', 'Dinv26272' => 'din', 'Dinv26739' => 'din', 'Dinv28015' => 'din', 'Dinv30925' => 'din', 'Dinv41987' => 'din', 'Dinv42372' => 'din', 'Duzib084G0695' => 'dzi', 'Duzib168G1443' => 'dzi', 'Duzib205G0152' => 'dzi', 'Duzib205G1830' => 'dzi', 'ECA240G2629' => 'eca', 'ECA240G4292' => 'eca', 'ECA246G1424' => 'eca', 'ECA246G1912' => 'eca', 'ECA246G2513' => 'eca', 'ECA246G3369' => 'eca', 'ECA247G3309' => 'eca', 'EL10Ac5g11138' => 'bvu', 'EL10Ac5g11968' => 'bvu', 'EL10Ac8g19115' => 'bvu', 'Eucgr.B00599' => 'egr', 'Eucgr.B00601' => 'egr', 'Eucgr.C03561' => 'egr', 'Eucgr.D02593' => 'egr', 'FAN04G2448' => 'fan', 'FAN08G1674' => 'fan', 'FAN08G2719' => 'fan', 'FAN13G0731' => 'fan', 'FAN13G2002' => 'fan', 'FAN18G2954' => 'fan', 'FAN18G3561' => 'fan', 'FAN18G4284' => 'fan', 'FAN19G2973' => 'fan', 'FAN23G0408' => 'fan', 'FAN26G2759' => 'fan', 'FAN26G2843' => 'fan', 'FvH4_1g08261' => 'fve', 'FvH4_5g13771' => 'fve', 'FvH4_5g23941' => 'fve', 'Glyma.05G020600' => 'gma', 'Glyma.09G213300' => 'gma', 'Glyma.09G213500' => 'gma', 'Glyma.15G174100' => 'gma', 'Glyma.17G078700' => 'gma', 'Gohir.A03G070300' => 'ghi', 'Gohir.A12G202700' => 'ghi', 'Gohir.A13G191600' => 'ghi', 'Gohir.D03G096700' => 'ghi', 'Gohir.D12G205400' => 'ghi', 'Gohir.D13G197000' => 'ghi', 'Gorai.003G101500' => 'gra', 'Gorai.008G220300' => 'gra', 'Gorai.013G225700' => 'gra', 'GSVIVG01002032001' => 'vvi', 'GSVIVG01007849001' => 'vvi', 'GSVIVG01014617001' => 'vvi', 'GSVIVG01014619001' => 'vvi', 'GSVIVG01015111001' => 'vvi', 'GSVIVG01020590001' => 'vvi', 'GSVIVG01022784001' => 'vvi', 'GSVIVG01023662001' => 'vvi', 'GSVIVG01023663001' => 'vvi', 'GSVIVG01032319001' => 'vvi', 'GSVIVG01032320001' => 'vvi', 'GSVIVG01035135001' => 'vvi', 'GSVIVG01037062001' => 'vvi', 'GSVIVG01037063001' => 'vvi', 'HanXRQChr02g0044771' => 'han', 'HanXRQChr03g0081181' => 'han', 'HanXRQChr10g0300431' => 'han', 'HanXRQChr10g0300451' => 'han', 'HanXRQChr10g0319611' => 'han', 'HanXRQChr16g0517661' => 'han', 'HanXRQChr17g0539191' => 'han', 'Haze_07734' => 'cav', 'Haze_08068' => 'cav', 'Haze_25975' => 'cav', 'Hma1.2p1_0060F.1_g033050' => 'hma', 'Hma1.2p1_0544F.1_g175470' => 'hma', 'HPP92_012596' => 'vpl', 'HPP92_014050' => 'vpl', 'HPP92_014304' => 'vpl', 'HPP92_019327' => 'vpl', 'Hund02583' => 'sun', 'Hund09917' => 'sun', 'Hund11146' => 'sun', 'Hund26003' => 'sun', 'Lalb_Chr08g0232511' => 'lal', 'Lalb_Chr12g0197221' => 'lal', 'Lalb_Chr13g0302831' => 'lal', 'Lalb_Chr16g0380751' => 'lal', 'Lj2g0016644' => 'lja', 'Lj2g0019271' => 'lja', 'Lj4A909T87' => 'lonja', 'Lj4C905G6' => 'lonja', 'Lj4C909T19' => 'lonja', 'Lj4g0011361' => 'lja', 'Lj4g0021262' => 'lja', 'Lj5A102T96' => 'lonja', 'Lj6g0016995' => 'lja', 'Lj8C334G12' => 'lonja', 'Lj9C471T8' => 'lonja', 'Lsat_1_v5_gn_1_14461' => 'lsa', 'Lsat_1_v5_gn_3_26741' => 'lsa', 'Lsat_1_v5_gn_3_26761' => 'lsa', 'Lsat_1_v5_gn_5_141780' => 'lsa', 'Lsat_1_v5_gn_5_58221' => 'lsa', 'Lsat_1_v5_gn_5_58641' => 'lsa', 'Manes.03G038600' => 'mes', 'Manes.06G084200' => 'mes', 'Manes.17G003800' => 'mes', 'Manes.17G004337' => 'mes', 'Mapoly0109s0044' => 'mpo', 'Mapoly0125s0021' => 'mpo', 'MBI04_g27279_MAGBIO' => 'mbi', 'MBI07_g08573_MAGBIO' => 'mbi', 'MBI07_g46481_MAGBIO' => 'mbi', 'MBI11_g43227_MAGBIO' => 'mbi', 'MBI13_g21846_MAGBIO' => 'mbi', 'MBI17_g04594_MAGBIO' => 'mbi', 'MBI19_g11847_MAGBIO' => 'mbi', 'MCO07G139' => 'mco', 'MCO09G242' => 'mco', 'MD00G1001700' => 'mdo', 'MD02G1087200' => 'mdo', 'MD06G1015200' => 'mdo', 'MD06G1225500' => 'mdo', 'MD14G1212400' => 'mdo', 'MD15G1214800' => 'mdo', 'Medtr1g095050' => 'mtr', 'Medtr2g041270' => 'mtr', 'Medtr3g047950' => 'mtr', 'Medtr4g064240' => 'mtr', 'Medtr4g109580' => 'mtr', 'Medtr4g109590' => 'mtr', 'Medtr5g026880' => 'mtr', 'Medtr5g048670' => 'mtr', 'MELO3C004643.2' => 'cme', 'MELO3C013797.2' => 'cme', 'MELO3C017228.2' => 'cme', 'Migut.A00558' => 'egut', 'Migut.I00367' => 'egut', 'Migut.J00947' => 'egut', 'MSTRG.11337' => 'ama', 'MSTRG.22957' => 'ama', 'MSTRG.25728' => 'ama', 'Nitab4.5_0000024g0120' => 'nta', 'Nitab4.5_0000108g0410' => 'nta', 'Nitab4.5_0001485g0110' => 'nta', 'Nitab4.5_0003992g0030' => 'nta', 'Nitab4.5_0006563g0010' => 'nta', 'Nitab4.5_0009401g0060' => 'nta', 'Nn1g02070' => 'nnu', 'Nn3g17458' => 'nnu', 'Nn4g23436' => 'nnu', 'Nn5g28104' => 'nnu', 'Nn8g38709' => 'nnu', 'Nn8g40648' => 'nnu', 'Oeu017324.1' => 'oeu', 'Oeu042211.1' => 'oeu', 'Oeu044875.1' => 'oeu', 'Oeu061166.1' => 'oeu', 'Os02g0776800' => 'osa', 'Os03g0214100' => 'osa', 'Os05g0111000' => 'osa', 'Peaxi162Scf00201g00330' => 'pax', 'Peaxi162Scf00408g00837' => 'pax', 'Peaxi162Scf00724g00059' => 'pax', 'PGR031G2041' => 'pgr', 'PGR031G3208' => 'pgr', 'PGR044G0832' => 'pgr', 'PGR083G2843' => 'pgr', 'PGSC0003DMG400024634' => 'stu', 'PGSC0003DMG400030860' => 'stu', 'PGSC0003DMG400044420' => 'stu', 'Phvul.002G128800' => 'pvu', 'Phvul.003G184400' => 'pvu', 'Phvul.009G228500' => 'pvu', 'Potri.003G102700' => 'ptr', 'Potri.015G057300' => 'ptr', 'Potri.018G065300' => 'ptr', 'Pp3c1_20770' => 'ppa', 'Pp3c20_10450' => 'ppa', 'Pp3c23_16880' => 'ppa', 'PRCOL_00003597' => 'pco', 'Prupe.5G020900' => 'ppe', 'Prupe.5G205700' => 'ppe', 'Prupe.7G202500' => 'ppe', 'Psat1g132720' => 'psa', 'Psat2g142080' => 'psa', 'Psat4g047800' => 'psa', 'PSO017G4603' => 'pso', 'PSO063G1428' => 'pso', 'PSO063G2170' => 'pso', 'PSO063G2983' => 'pso', 'PSO063G4795' => 'pso', 'PSO210G0233' => 'pso', 'PSO210G5735' => 'pso', 'PSO478G2603' => 'pso', 'PSO731G0068' => 'pso', 'PSO782G4142' => 'pso', 'QL02p061033' => 'qlo', 'QL10p019699' => 'qlo', 'QL12p000754' => 'qlo', 'QL12p000778' => 'qlo', 'RcHm_v2.0_Chr2g0094351' => 'rch', 'RcHm_v2.0_Chr2g0106871' => 'rch', 'RcHm_v2.0_Chr4g0402291' => 'rch', 'RcHm_v2.0_Chr5g0032071' => 'rch', 'RcHm_v2.0_Chr5g0038981' => 'rch', 'RcHm_v2.0_Chr7g0183161' => 'rch', 'RcHm_v2.0_Chr7g0207931' => 'rch', 'RcHm_v2.0_Chr7g0213381' => 'rch', 'Rhsim05G0012100' => 'rsi', 'Rhsim05G0012200' => 'rsi', 'Rhsim05G0012300' => 'rsi', 'Rhsim08G0145600' => 'rsi', 'Rhsim11G0025300' => 'rsi', 'Rhsim11G0025400' => 'rsi', 'RhsimUnG0172500' => 'rsi', 'Sabra03G0069900' => 'sbr', 'Sabra06G0112600' => 'sbr', 'Sabra06G0113900' => 'sbr', 'Sabra15G0082600' => 'sbr', 'Sabra15G0083000' => 'sbr', 'Sabra18G0057900' => 'sbr', 'Sc01g0007020' => 'sci', 'Sc04g0004360' => 'sci', 'Sc19g0001900' => 'sci', 'Sed0000920' => 'sed', 'Sed0015067' => 'sed', 'Sed0022878' => 'sed', 'Sed0027547' => 'sed', 'SEGI_00003' => 'sgi', 'SEGI_00361' => 'sgi', 'SEGI_00679' => 'sgi', 'SEGI_00714' => 'sgi', 'SEGI_01198' => 'sgi', 'SEGI_01245' => 'sgi', 'SEGI_01360' => 'sgi', 'SEGI_01683' => 'sgi', 'SEGI_01959' => 'sgi', 'SEGI_02614' => 'sgi', 'SEGI_02685' => 'sgi', 'SEGI_02882' => 'sgi', 'SEGI_02899' => 'sgi', 'SEGI_03718' => 'sgi', 'SEGI_04497' => 'sgi', 'SEGI_04520' => 'sgi', 'SEGI_04795' => 'sgi', 'SEGI_05071' => 'sgi', 'SEGI_05176' => 'sgi', 'SEGI_05651' => 'sgi', 'SEGI_05771' => 'sgi', 'SEGI_06287' => 'sgi', 'SEGI_06336' => 'sgi', 'SEGI_06573' => 'sgi', 'SEGI_06635' => 'sgi', 'SEGI_06941' => 'sgi', 'SEGI_07067' => 'sgi', 'SEGI_07193' => 'sgi', 'SEGI_08053' => 'sgi', 'SEGI_08060' => 'sgi', 'SEGI_08111' => 'sgi', 'SEGI_08146' => 'sgi', 'SEGI_08283' => 'sgi', 'SEGI_08943' => 'sgi', 'SEGI_09316' => 'sgi', 'SEGI_09631' => 'sgi', 'SEGI_09636' => 'sgi', 'SEGI_09821' => 'sgi', 'SEGI_09861' => 'sgi', 'SEGI_09929' => 'sgi', 'SEGI_10600' => 'sgi', 'SEGI_11169' => 'sgi', 'SEGI_11783' => 'sgi', 'SEGI_11933' => 'sgi', 'SEGI_12188' => 'sgi', 'SEGI_12360' => 'sgi', 'SEGI_12473' => 'sgi', 'SEGI_13329' => 'sgi', 'SEGI_13680' => 'sgi', 'SEGI_13841' => 'sgi', 'SEGI_13896' => 'sgi', 'SEGI_14062' => 'sgi', 'SEGI_14230' => 'sgi', 'SEGI_14260' => 'sgi', 'SEGI_14935' => 'sgi', 'SEGI_14940' => 'sgi', 'SEGI_15192' => 'sgi', 'SEGI_15535' => 'sgi', 'SEGI_15741' => 'sgi', 'SEGI_16125' => 'sgi', 'SEGI_16242' => 'sgi', 'SEGI_16358' => 'sgi', 'SEGI_16500' => 'sgi', 'SEGI_16551' => 'sgi', 'SEGI_16615' => 'sgi', 'SEGI_16686' => 'sgi', 'SEGI_16695' => 'sgi', 'SEGI_17357' => 'sgi', 'SEGI_17394' => 'sgi', 'SEGI_17447' => 'sgi', 'SEGI_17936' => 'sgi', 'SEGI_17969' => 'sgi', 'SEGI_18072' => 'sgi', 'SEGI_18457' => 'sgi', 'SEGI_18576' => 'sgi', 'SEGI_18847' => 'sgi', 'SEGI_18898' => 'sgi', 'SEGI_19719' => 'sgi', 'SEGI_19975' => 'sgi', 'SEGI_20150' => 'sgi', 'SEGI_20194' => 'sgi', 'SEGI_20228' => 'sgi', 'SEGI_20289' => 'sgi', 'SEGI_20391' => 'sgi', 'SEGI_20626' => 'sgi', 'SEGI_20679' => 'sgi', 'SEGI_20798' => 'sgi', 'SEGI_21076' => 'sgi', 'SEGI_21469' => 'sgi', 'SEGI_21480' => 'sgi', 'SEGI_21533' => 'sgi', 'SEGI_21607' => 'sgi', 'SEGI_21687' => 'sgi', 'SEGI_21743' => 'sgi', 'SEGI_21806' => 'sgi', 'SEGI_22147' => 'sgi', 'SEGI_22182' => 'sgi', 'SEGI_22206' => 'sgi', 'SEGI_22436' => 'sgi', 'SEGI_22572' => 'sgi', 'SEGI_22792' => 'sgi', 'SEGI_23016' => 'sgi', 'SEGI_23133' => 'sgi', 'SEGI_23378' => 'sgi', 'SEGI_23554' => 'sgi', 'SEGI_23604' => 'sgi', 'SEGI_23854' => 'sgi', 'SEGI_23982' => 'sgi', 'SEGI_24178' => 'sgi', 'SEGI_24246' => 'sgi', 'SEGI_24393' => 'sgi', 'SEGI_24448' => 'sgi', 'SEGI_24539' => 'sgi', 'SEGI_24734' => 'sgi', 'SEGI_25221' => 'sgi', 'SEGI_25449' => 'sgi', 'SEGI_25588' => 'sgi', 'SEGI_25675' => 'sgi', 'SEGI_25824' => 'sgi', 'SEGI_26141' => 'sgi', 'SEGI_26459' => 'sgi', 'SEGI_26730' => 'sgi', 'SEGI_27216' => 'sgi', 'SEGI_27643' => 'sgi', 'SEGI_28292' => 'sgi', 'SEGI_28593' => 'sgi', 'SEGI_28848' => 'sgi', 'SEGI_28956' => 'sgi', 'SEGI_29792' => 'sgi', 'SEGI_29899' => 'sgi', 'SEGI_30527' => 'sgi', 'SEGI_30904' => 'sgi', 'SEGI_30909' => 'sgi', 'SEGI_31235' => 'sgi', 'SEGI_31280' => 'sgi', 'SEGI_31410' => 'sgi', 'SEGI_31607' => 'sgi', 'SEGI_31649' => 'sgi', 'SEGI_31866' => 'sgi', 'SEGI_31907' => 'sgi', 'SEGI_32074' => 'sgi', 'SEGI_32223' => 'sgi', 'SEGI_32376' => 'sgi', 'SEGI_32406' => 'sgi', 'SEGI_32808' => 'sgi', 'SEGI_32947' => 'sgi', 'SEGI_33261' => 'sgi', 'SEGI_33525' => 'sgi', 'SEGI_33528' => 'sgi', 'SEGI_33546' => 'sgi', 'SEGI_33591' => 'sgi', 'SEGI_33676' => 'sgi', 'SEGI_33910' => 'sgi', 'SEGI_34155' => 'sgi', 'SEGI_34291' => 'sgi', 'SEGI_34315' => 'sgi', 'SEGI_34598' => 'sgi', 'SEGI_34761' => 'sgi', 'SEGI_34835' => 'sgi', 'SEGI_34998' => 'sgi', 'SEGI_35352' => 'sgi', 'SEGI_35512' => 'sgi', 'SEGI_35552' => 'sgi', 'SEGI_35732' => 'sgi', 'SEGI_36143' => 'sgi', 'SEGI_36496' => 'sgi', 'SEGI_36527' => 'sgi', 'SEGI_36585' => 'sgi', 'SEGI_36652' => 'sgi', 'SEGI_37497' => 'sgi', 'SEGI_37981' => 'sgi', 'SEGI_38047' => 'sgi', 'SEGI_38212' => 'sgi', 'SEGI_38690' => 'sgi', 'SEGI_38907' => 'sgi', 'SEGI_39067' => 'sgi', 'SEGI_39240' => 'sgi', 'SEGI_39273' => 'sgi', 'SEGI_39914' => 'sgi', 'SEGI_39946' => 'sgi', 'SEGI_40163' => 'sgi', 'SEGI_40188' => 'sgi', 'SEGI_40657' => 'sgi', 'SEGI_40735' => 'sgi', 'SEGI_40772' => 'sgi', 'SEGI_40900' => 'sgi', 'SEGI_41144' => 'sgi', 'SEGI_41182' => 'sgi', 'SEGI_41224' => 'sgi', 'SGA_v2.0_scaffold25G10955' => 'sas', 'SGA_v2.0_scaffold28G11745' => 'sas', 'SGA_v2.0_scaffold333G49017' => 'sas', 'SGA_v2.0_scaffold89G27397' => 'sas', 'SGA_v2.0_scaffold91G28086' => 'sas', 'SGA_v2.0_scaffold96G29068' => 'sas', 'SGA_v2.0_scaffold96G29069' => 'sas', 'SHI07207' => 'shi', 'SHI27089' => 'shi', 'SHI27090' => 'shi', 'SMO026G0001' => 'smo', 'SMO062G0004' => 'smo', 'SMO109G0004' => 'smo', 'SMO112G0064' => 'smo', 'SMO115G0028' => 'smo', 'SMO116G0284' => 'smo', 'SMO119G0217' => 'smo', 'SMO122G0012' => 'smo', 'SMO134G0024' => 'smo', 'SMO137G0045' => 'smo', 'SMO146G0099' => 'smo', 'SMO159G0007' => 'smo', 'SMO169G0286' => 'smo', 'SMO174G0100' => 'smo', 'SMO183G0002' => 'smo', 'SMO202G0046' => 'smo', 'SMO274G0007' => 'smo', 'SMO286G0019' => 'smo', 'SMO320G0001' => 'smo', 'SMO321G0001' => 'smo', 'SMO342G0003' => 'smo', 'SMO354G0006' => 'smo', 'SMO358G0534' => 'smo', 'SMO360G0011' => 'smo', 'SMO364G0527' => 'smo', 'SMO364G0729' => 'smo', 'SMO367G1049' => 'smo', 'Solyc03g115050.3' => 'sly', 'Solyc05g025590.4' => 'sly', 'Solyc08g075840.3' => 'sly', 'Sopen03g034120' => 'spe', 'Sopen05g020190' => 'spe', 'Sopen08g024480' => 'spe', 'Sp2g10350' => 'spa', 'Sp2g24310' => 'spa', 'Sp3g24710' => 'spa', 'Sp6g34920' => 'spa', 'Sp7g17830' => 'spa', 'TAR063G0004' => 'tar', 'TAR091G0002' => 'tar', 'TAR371G0114' => 'tar', 'TAR371G0671' => 'tar', 'TAR374G1226' => 'tar', 'TAR375G1100' => 'tar', 'TAR622G0908' => 'tar', 'TAR624G0651' => 'tar', 'TAR625G0518' => 'tar', 'TAR629G0759' => 'tar', 'TAR629G1891' => 'tar', 'THA.LOC104804633' => 'tha', 'THA.LOC104806192' => 'tha', 'THA.LOC104819400' => 'tha', 'THA.LOC104826582' => 'tha', 'Thecc.03G102500' => 'tca', 'Thecc.03G317500' => 'tca', 'Thecc.09G080300' => 'tca', 'Thecc.09G080500' => 'tca', 'Thhalv10000781m.g' => 'esa', 'Thhalv10001929m.g' => 'esa', 'Thhalv10003822m.g' => 'esa', 'Thhalv10013014m.g' => 'esa', 'Thhalv10024555m.g' => 'esa', 'TPR.G10916' => 'tpr', 'TPR.G15686' => 'tpr', 'TPR.G17277' => 'tpr', 'TPR.G20024' => 'tpr', 'TPR.G2021' => 'tpr', 'TPR.G29493' => 'tpr', 'TWI34G1166' => 'twi', 'TWI36G1694' => 'twi', 'TWI56G1436' => 'twi', 'TWI81G1098' => 'twi', 'unitig_22.g5102' => 'ugi', 'unitig_62.g23555' => 'ugi', 'vmacro00064' => 'vma', 'vmacro17144' => 'vma', 'vmacro17181' => 'vma', 'vmacro17211' => 'vma', 'vmacro17614' => 'vma', 'vmacro19552' => 'vma', 'vmacro19553' => 'vma', 'VMungo0720G0183' => 'vmu', 'VMungo1215G0840' => 'vmu', 'VMungo1215G1142' => 'vmu', 'VMungo1309G1355' => 'vmu', 'Zm00001eb008630' => 'zma', 'Zm00001eb193190' => 'zma', 'Zm00001eb266890' => 'zma', 'Zm00001eb282530' => 'zma', 'Zm00001eb400180' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D000824' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000824' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D000824' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000824' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Warning (2): Invalid argument supplied for foreach() [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000824', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '721', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p33820' => 'bna', 'A01p33830' => 'bna', 'A01p33840' => 'bna', 'A02p29120' => 'bna', 'A03p03540' => 'bna', 'A03p46710' => 'bna', 'A03p51740' => 'bna', 'A07p06210' => 'bna', 'A09p07190' => 'bna', 'A09p21780' => 'bna', 'Aa31LG3G18510' => 'aar', 'Aa31LG6G1820' => 'aar', 'Aa31LG8G11780' => 'aar', 'Aa31LG9G7600' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2389' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.479' => 'aag', 'Actinidia01266' => 'ach', 'Actinidia04822' => 'ach', 'Actinidia16130' => 'ach', 'Actinidia16131' => 'ach', 'Actinidia16537' => 'ach', 'Actinidia32773' => 'ach', 'Actinidia39675' => 'ach', 'Ah.02g114080' => 'amhyb', 'Ah.07g201170' => 'amhyb', 'Ah.09g231350' => 'amhyb', 'Ah.11g047720' => 'amhyb', 'Ah.12g055800' => 'amhyb', 'AL1G45720' => 'aly', 'AL3G43800' => 'aly', 'AL6G18370' => 'aly', 'AL6G18410' => 'aly', 'AL6G19570' => 'aly', 'AL7G34960' => 'aly', 'AL8G37660' => 'aly', 'Aqoxy1G03346' => 'aox', 'Aqoxy3G02011' => 'aox', 'Aqoxy3G02012' => 'aox', 'Aqoxy3G02013' => 'aox', 'Aqoxy3G03684' => 'aox', 'Aqoxy4G01721' => 'aox', 'Aqoxy4G01813' => 'aox', 'Aqoxy6G02323' => 'aox', 'Aqoxy7G02240' => 'aox', 'Aqoxy7G04110' => 'aox', 'Aqoxy7G04112' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04BWFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71ADJA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79SD3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D7TWRW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3U0AR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J8WCL7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RQXR03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7GC2W' => 'arhy', 'AT2G06510' => 'ath', 'AT4G19130' => 'ath', 'AT5G08020' => 'ath', 'AT5G45400' => 'ath', 'AT5G61000' => 'ath', 'ATR0177G023' => 'atr', 'ATR0598G158' => 'atr', 'ATR0829G100' => 'atr', 'ATR0829G214' => 'atr', 'Atru.chr7.1669' => 'acertr', 'Atru.chr7.1670' => 'acertr', 'Atru.chr7.1671' => 'acertr', 'Atru.chr8.1429' => 'acertr', 'Atru.chr8.1430' => 'acertr', 'Atru.chr9.564' => 'acertr', 'AUR62007386' => 'cqu', 'AUR62008537' => 'cqu', 'AUR62018601' => 'cqu', 'AUR62021554' => 'cqu', 'AUR62025182' => 'cqu', 'AUR62028992' => 'cqu', 'BcaB01g05642' => 'bca', 'BcaB01g05683' => 'bca', 'BcaB02g09847' => 'bca', 'BcaB07g30456' => 'bca', 'BcaB07g30884' => 'bca', 'BcaB08g37297' => 'bca', 'BcaC04g21762' => 'bca', 'BcaC04g23467' => 'bca', 'BcaC05g24775' => 'bca', 'BcaC06g30610' => 'bca', 'BcaC06g32889' => 'bca', 'BcaC06g33184' => 'bca', 'BcaC06g35976' => 'bca', 'BcaC09g50885' => 'bca', 'BcaNung03077' => 'bca', 'BcaNung06900' => 'bca', 'BolC1t03820H' => 'bol', 'BolC2t10676H' => 'bol', 'BolC3t12936H' => 'bol', 'BolC5t29475H' => 'bol', 'BolC7t41345H' => 'bol', 'BolC7t44999H' => 'bol', 'BolC7t45528H' => 'bol', 'BolC7t45846H' => 'bol', 'BolC9t53717H' => 'bol', 'BolC9t55651H' => 'bol', 'BraA02t07945Z' => 'bra', 'BraA03t09704Z' => 'bra', 'BraA03t13794Z' => 'bra', 'BraA03t14263Z' => 'bra', 'BraA07t28419Z' => 'bra', 'BraA09t36368Z' => 'bra', 'BraA09t37781Z' => 'bra', 'C01p38580' => 'bna', 'C02p46200' => 'bna', 'C03p03990' => 'bna', 'C05p07210' => 'bna', 'C07p09270' => 'bna', 'C07p44760' => 'bna', 'C07p50260' => 'bna', 'C09p08030' => 'bna', 'C09p27880' => 'bna', 'CAN.G1228.20' => 'can', 'CAN.G1427.10' => 'can', 'CAN.G148.16' => 'can', 'CAN.G227.6' => 'can', 'CANSAT01G1154' => 'cansat', 'CANSAT54G1889' => 'cansat', 'CANSAT56G3947' => 'cansat', 'CANSAT80G1236' => 'cansat', 'CARHR103830' => 'chi', 'CARHR176670' => 'chi', 'CARHR205160' => 'chi', 'CARHR274710' => 'chi', 'Carub.0003s2727' => 'cru', 'Carub.0006s0691' => 'cru', 'Carub.0007s2202' => 'cru', 'Carub.0008s0271' => 'cru', 'Carub.0008s2169' => 'cru', 'Ca_13349_v3' => 'car', 'Ca_21769_v3' => 'car', 'Ca_21770_v3' => 'car', 'Ca_25103_v3' => 'car', 'CBR_g23266' => 'cbr', 'CBR_g36292' => 'cbr', 'CBR_g37119' => 'cbr', 'CBR_g55372' => 'cbr', 'Cc00_g07660' => 'ccan', 'Cc06_g11960' => 'ccan', 'Cc08_g05150' => 'ccan', 'CDE01G0675' => 'cde', 'CDE02G4126' => 'cde', 'CDE06G1892' => 'cde', 'CDE11G0897' => 'cde', 'CDE12G0883' => 'cde', 'Cfa003026' => 'cfa', 'Cfa012589' => 'cfa', 'Cfa019342' => 'cfa', 'Cfa025402' => 'cfa', 'Ciclev10000254m.g' => 'ccl', 'Ciclev10009939m.g' => 'ccl', 'Ciclev10010492m.g' => 'ccl', 'Ciclev10019317m.g' => 'ccl', 'CiPaw.03G209600' => 'cil', 'CiPaw.11G054100' => 'cil', 'CiPaw.11G103100' => 'cil', 'ClCG06G015600' => 'cla', 'ClCG10G001050' => 'cla', 'ClCG11G001530' => 'cla', 'COL.COLO4_06851' => 'col', 'COL.COLO4_14060' => 'col', 'COL.COLO4_18126' => 'col', 'COL.COLO4_32275' => 'col', 'Cpa.g.sc1086.1' => 'cpa', 'Cpa.g.sc137.10' => 'cpa', 'Cpa.g.sc137.11' => 'cpa', 'Cpa.g.sc28.78' => 'cpa', 'Cre16.g651000' => 'cre', 'Cre17.g718850' => 'cre', 'CsaV3_1G002970' => 'csa', 'CsaV3_2G001260' => 'csa', 'CsaV3_3G001070' => 'csa', 'CSS0005493' => 'camsi', 'CSS0007192' => 'camsi', 'CSS0009813' => 'camsi', 'CSS0020965' => 'camsi', 'CSS0031599' => 'camsi', 'CSS0032107' => 'camsi', 'CSS0033943' => 'camsi', 'CSS0043196' => 'camsi', 'DCAR_004240' => 'dca', 'DCAR_011568' => 'dca', 'DCAR_011569' => 'dca', 'DCAR_023168' => 'dca', 'DCAR_028290' => 'dca', 'Dinv06490' => 'din', 'Dinv08250' => 'din', 'Dinv08482' => 'din', 'Dinv10520' => 'din', 'Dinv17419' => 'din', 'Dinv19531' => 'din', 'Dinv22755' => 'din', 'Dinv22775' => 'din', 'Dinv22867' => 'din', 'Dinv26272' => 'din', 'Dinv26739' => 'din', 'Dinv28015' => 'din', 'Dinv30925' => 'din', 'Dinv41987' => 'din', 'Dinv42372' => 'din', 'Duzib084G0695' => 'dzi', 'Duzib168G1443' => 'dzi', 'Duzib205G0152' => 'dzi', 'Duzib205G1830' => 'dzi', 'ECA240G2629' => 'eca', 'ECA240G4292' => 'eca', 'ECA246G1424' => 'eca', 'ECA246G1912' => 'eca', 'ECA246G2513' => 'eca', 'ECA246G3369' => 'eca', 'ECA247G3309' => 'eca', 'EL10Ac5g11138' => 'bvu', 'EL10Ac5g11968' => 'bvu', 'EL10Ac8g19115' => 'bvu', 'Eucgr.B00599' => 'egr', 'Eucgr.B00601' => 'egr', 'Eucgr.C03561' => 'egr', 'Eucgr.D02593' => 'egr', 'FAN04G2448' => 'fan', 'FAN08G1674' => 'fan', 'FAN08G2719' => 'fan', 'FAN13G0731' => 'fan', 'FAN13G2002' => 'fan', 'FAN18G2954' => 'fan', 'FAN18G3561' => 'fan', 'FAN18G4284' => 'fan', 'FAN19G2973' => 'fan', 'FAN23G0408' => 'fan', 'FAN26G2759' => 'fan', 'FAN26G2843' => 'fan', 'FvH4_1g08261' => 'fve', 'FvH4_5g13771' => 'fve', 'FvH4_5g23941' => 'fve', 'Glyma.05G020600' => 'gma', 'Glyma.09G213300' => 'gma', 'Glyma.09G213500' => 'gma', 'Glyma.15G174100' => 'gma', 'Glyma.17G078700' => 'gma', 'Gohir.A03G070300' => 'ghi', 'Gohir.A12G202700' => 'ghi', 'Gohir.A13G191600' => 'ghi', 'Gohir.D03G096700' => 'ghi', 'Gohir.D12G205400' => 'ghi', 'Gohir.D13G197000' => 'ghi', 'Gorai.003G101500' => 'gra', 'Gorai.008G220300' => 'gra', 'Gorai.013G225700' => 'gra', 'GSVIVG01002032001' => 'vvi', 'GSVIVG01007849001' => 'vvi', 'GSVIVG01014617001' => 'vvi', 'GSVIVG01014619001' => 'vvi', 'GSVIVG01015111001' => 'vvi', 'GSVIVG01020590001' => 'vvi', 'GSVIVG01022784001' => 'vvi', 'GSVIVG01023662001' => 'vvi', 'GSVIVG01023663001' => 'vvi', 'GSVIVG01032319001' => 'vvi', 'GSVIVG01032320001' => 'vvi', 'GSVIVG01035135001' => 'vvi', 'GSVIVG01037062001' => 'vvi', 'GSVIVG01037063001' => 'vvi', 'HanXRQChr02g0044771' => 'han', 'HanXRQChr03g0081181' => 'han', 'HanXRQChr10g0300431' => 'han', 'HanXRQChr10g0300451' => 'han', 'HanXRQChr10g0319611' => 'han', 'HanXRQChr16g0517661' => 'han', 'HanXRQChr17g0539191' => 'han', 'Haze_07734' => 'cav', 'Haze_08068' => 'cav', 'Haze_25975' => 'cav', 'Hma1.2p1_0060F.1_g033050' => 'hma', 'Hma1.2p1_0544F.1_g175470' => 'hma', 'HPP92_012596' => 'vpl', 'HPP92_014050' => 'vpl', 'HPP92_014304' => 'vpl', 'HPP92_019327' => 'vpl', 'Hund02583' => 'sun', 'Hund09917' => 'sun', 'Hund11146' => 'sun', 'Hund26003' => 'sun', 'Lalb_Chr08g0232511' => 'lal', 'Lalb_Chr12g0197221' => 'lal', 'Lalb_Chr13g0302831' => 'lal', 'Lalb_Chr16g0380751' => 'lal', 'Lj2g0016644' => 'lja', 'Lj2g0019271' => 'lja', 'Lj4A909T87' => 'lonja', 'Lj4C905G6' => 'lonja', 'Lj4C909T19' => 'lonja', 'Lj4g0011361' => 'lja', 'Lj4g0021262' => 'lja', 'Lj5A102T96' => 'lonja', 'Lj6g0016995' => 'lja', 'Lj8C334G12' => 'lonja', 'Lj9C471T8' => 'lonja', 'Lsat_1_v5_gn_1_14461' => 'lsa', 'Lsat_1_v5_gn_3_26741' => 'lsa', 'Lsat_1_v5_gn_3_26761' => 'lsa', 'Lsat_1_v5_gn_5_141780' => 'lsa', 'Lsat_1_v5_gn_5_58221' => 'lsa', 'Lsat_1_v5_gn_5_58641' => 'lsa', 'Manes.03G038600' => 'mes', 'Manes.06G084200' => 'mes', 'Manes.17G003800' => 'mes', 'Manes.17G004337' => 'mes', 'Mapoly0109s0044' => 'mpo', 'Mapoly0125s0021' => 'mpo', 'MBI04_g27279_MAGBIO' => 'mbi', 'MBI07_g08573_MAGBIO' => 'mbi', 'MBI07_g46481_MAGBIO' => 'mbi', 'MBI11_g43227_MAGBIO' => 'mbi', 'MBI13_g21846_MAGBIO' => 'mbi', 'MBI17_g04594_MAGBIO' => 'mbi', 'MBI19_g11847_MAGBIO' => 'mbi', 'MCO07G139' => 'mco', 'MCO09G242' => 'mco', 'MD00G1001700' => 'mdo', 'MD02G1087200' => 'mdo', 'MD06G1015200' => 'mdo', 'MD06G1225500' => 'mdo', 'MD14G1212400' => 'mdo', 'MD15G1214800' => 'mdo', 'Medtr1g095050' => 'mtr', 'Medtr2g041270' => 'mtr', 'Medtr3g047950' => 'mtr', 'Medtr4g064240' => 'mtr', 'Medtr4g109580' => 'mtr', 'Medtr4g109590' => 'mtr', 'Medtr5g026880' => 'mtr', 'Medtr5g048670' => 'mtr', 'MELO3C004643.2' => 'cme', 'MELO3C013797.2' => 'cme', 'MELO3C017228.2' => 'cme', 'Migut.A00558' => 'egut', 'Migut.I00367' => 'egut', 'Migut.J00947' => 'egut', 'MSTRG.11337' => 'ama', 'MSTRG.22957' => 'ama', 'MSTRG.25728' => 'ama', 'Nitab4.5_0000024g0120' => 'nta', 'Nitab4.5_0000108g0410' => 'nta', 'Nitab4.5_0001485g0110' => 'nta', 'Nitab4.5_0003992g0030' => 'nta', 'Nitab4.5_0006563g0010' => 'nta', 'Nitab4.5_0009401g0060' => 'nta', 'Nn1g02070' => 'nnu', 'Nn3g17458' => 'nnu', 'Nn4g23436' => 'nnu', 'Nn5g28104' => 'nnu', 'Nn8g38709' => 'nnu', 'Nn8g40648' => 'nnu', 'Oeu017324.1' => 'oeu', 'Oeu042211.1' => 'oeu', 'Oeu044875.1' => 'oeu', 'Oeu061166.1' => 'oeu', 'Os02g0776800' => 'osa', 'Os03g0214100' => 'osa', 'Os05g0111000' => 'osa', 'Peaxi162Scf00201g00330' => 'pax', 'Peaxi162Scf00408g00837' => 'pax', 'Peaxi162Scf00724g00059' => 'pax', 'PGR031G2041' => 'pgr', 'PGR031G3208' => 'pgr', 'PGR044G0832' => 'pgr', 'PGR083G2843' => 'pgr', 'PGSC0003DMG400024634' => 'stu', 'PGSC0003DMG400030860' => 'stu', 'PGSC0003DMG400044420' => 'stu', 'Phvul.002G128800' => 'pvu', 'Phvul.003G184400' => 'pvu', 'Phvul.009G228500' => 'pvu', 'Potri.003G102700' => 'ptr', 'Potri.015G057300' => 'ptr', 'Potri.018G065300' => 'ptr', 'Pp3c1_20770' => 'ppa', 'Pp3c20_10450' => 'ppa', 'Pp3c23_16880' => 'ppa', 'PRCOL_00003597' => 'pco', 'Prupe.5G020900' => 'ppe', 'Prupe.5G205700' => 'ppe', 'Prupe.7G202500' => 'ppe', 'Psat1g132720' => 'psa', 'Psat2g142080' => 'psa', 'Psat4g047800' => 'psa', 'PSO017G4603' => 'pso', 'PSO063G1428' => 'pso', 'PSO063G2170' => 'pso', 'PSO063G2983' => 'pso', 'PSO063G4795' => 'pso', 'PSO210G0233' => 'pso', 'PSO210G5735' => 'pso', 'PSO478G2603' => 'pso', 'PSO731G0068' => 'pso', 'PSO782G4142' => 'pso', 'QL02p061033' => 'qlo', 'QL10p019699' => 'qlo', 'QL12p000754' => 'qlo', 'QL12p000778' => 'qlo', 'RcHm_v2.0_Chr2g0094351' => 'rch', 'RcHm_v2.0_Chr2g0106871' => 'rch', 'RcHm_v2.0_Chr4g0402291' => 'rch', 'RcHm_v2.0_Chr5g0032071' => 'rch', 'RcHm_v2.0_Chr5g0038981' => 'rch', 'RcHm_v2.0_Chr7g0183161' => 'rch', 'RcHm_v2.0_Chr7g0207931' => 'rch', 'RcHm_v2.0_Chr7g0213381' => 'rch', 'Rhsim05G0012100' => 'rsi', 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'SGA_v2.0_scaffold89G27397' => 'sas', 'SGA_v2.0_scaffold91G28086' => 'sas', 'SGA_v2.0_scaffold96G29068' => 'sas', 'SGA_v2.0_scaffold96G29069' => 'sas', 'SHI07207' => 'shi', 'SHI27089' => 'shi', 'SHI27090' => 'shi', 'SMO026G0001' => 'smo', 'SMO062G0004' => 'smo', 'SMO109G0004' => 'smo', 'SMO112G0064' => 'smo', 'SMO115G0028' => 'smo', 'SMO116G0284' => 'smo', 'SMO119G0217' => 'smo', 'SMO122G0012' => 'smo', 'SMO134G0024' => 'smo', 'SMO137G0045' => 'smo', 'SMO146G0099' => 'smo', 'SMO159G0007' => 'smo', 'SMO169G0286' => 'smo', 'SMO174G0100' => 'smo', 'SMO183G0002' => 'smo', 'SMO202G0046' => 'smo', 'SMO274G0007' => 'smo', 'SMO286G0019' => 'smo', 'SMO320G0001' => 'smo', 'SMO321G0001' => 'smo', 'SMO342G0003' => 'smo', 'SMO354G0006' => 'smo', 'SMO358G0534' => 'smo', 'SMO360G0011' => 'smo', 'SMO364G0527' => 'smo', 'SMO364G0729' => 'smo', 'SMO367G1049' => 'smo', 'Solyc03g115050.3' => 'sly', 'Solyc05g025590.4' => 'sly', 'Solyc08g075840.3' => 'sly', 'Sopen03g034120' => 'spe', 'Sopen05g020190' => 'spe', 'Sopen08g024480' => 'spe', 'Sp2g10350' => 'spa', 'Sp2g24310' => 'spa', 'Sp3g24710' => 'spa', 'Sp6g34920' => 'spa', 'Sp7g17830' => 'spa', 'TAR063G0004' => 'tar', 'TAR091G0002' => 'tar', 'TAR371G0114' => 'tar', 'TAR371G0671' => 'tar', 'TAR374G1226' => 'tar', 'TAR375G1100' => 'tar', 'TAR622G0908' => 'tar', 'TAR624G0651' => 'tar', 'TAR625G0518' => 'tar', 'TAR629G0759' => 'tar', 'TAR629G1891' => 'tar', 'THA.LOC104804633' => 'tha', 'THA.LOC104806192' => 'tha', 'THA.LOC104819400' => 'tha', 'THA.LOC104826582' => 'tha', 'Thecc.03G102500' => 'tca', 'Thecc.03G317500' => 'tca', 'Thecc.09G080300' => 'tca', 'Thecc.09G080500' => 'tca', 'Thhalv10000781m.g' => 'esa', 'Thhalv10001929m.g' => 'esa', 'Thhalv10003822m.g' => 'esa', 'Thhalv10013014m.g' => 'esa', 'Thhalv10024555m.g' => 'esa', 'TPR.G10916' => 'tpr', 'TPR.G15686' => 'tpr', 'TPR.G17277' => 'tpr', 'TPR.G20024' => 'tpr', 'TPR.G2021' => 'tpr', 'TPR.G29493' => 'tpr', 'TWI34G1166' => 'twi', 'TWI36G1694' => 'twi', 'TWI56G1436' => 'twi', 'TWI81G1098' => 'twi', 'unitig_22.g5102' => 'ugi', 'unitig_62.g23555' => 'ugi', 'vmacro00064' => 'vma', 'vmacro17144' => 'vma', 'vmacro17181' => 'vma', 'vmacro17211' => 'vma', 'vmacro17614' => 'vma', 'vmacro19552' => 'vma', 'vmacro19553' => 'vma', 'VMungo0720G0183' => 'vmu', 'VMungo1215G0840' => 'vmu', 'VMungo1215G1142' => 'vmu', 'VMungo1309G1355' => 'vmu', 'Zm00001eb008630' => 'zma', 'Zm00001eb193190' => 'zma', 'Zm00001eb266890' => 'zma', 'Zm00001eb282530' => 'zma', 'Zm00001eb400180' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D000824', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000824' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D000824', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '721', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000824' ) ), 'genes' => array( 'A01p33820' => 'bna', 'A01p33830' => 'bna', 'A01p33840' => 'bna', 'A02p29120' => 'bna', 'A03p03540' => 'bna', 'A03p46710' => 'bna', 'A03p51740' => 'bna', 'A07p06210' => 'bna', 'A09p07190' => 'bna', 'A09p21780' => 'bna', 'Aa31LG3G18510' => 'aar', 'Aa31LG6G1820' => 'aar', 'Aa31LG8G11780' => 'aar', 'Aa31LG9G7600' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2389' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.479' => 'aag', 'Actinidia01266' => 'ach', 'Actinidia04822' => 'ach', 'Actinidia16130' => 'ach', 'Actinidia16131' => 'ach', 'Actinidia16537' => 'ach', 'Actinidia32773' => 'ach', 'Actinidia39675' => 'ach', 'Ah.02g114080' => 'amhyb', 'Ah.07g201170' => 'amhyb', 'Ah.09g231350' => 'amhyb', 'Ah.11g047720' => 'amhyb', 'Ah.12g055800' => 'amhyb', 'AL1G45720' => 'aly', 'AL3G43800' => 'aly', 'AL6G18370' => 'aly', 'AL6G18410' => 'aly', 'AL6G19570' => 'aly', 'AL7G34960' => 'aly', 'AL8G37660' => 'aly', 'Aqoxy1G03346' => 'aox', 'Aqoxy3G02011' => 'aox', 'Aqoxy3G02012' => 'aox', 'Aqoxy3G02013' => 'aox', 'Aqoxy3G03684' => 'aox', 'Aqoxy4G01721' => 'aox', 'Aqoxy4G01813' => 'aox', 'Aqoxy6G02323' => 'aox', 'Aqoxy7G02240' => 'aox', 'Aqoxy7G04110' => 'aox', 'Aqoxy7G04112' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04BWFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71ADJA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79SD3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D7TWRW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3U0AR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J8WCL7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RQXR03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7GC2W' => 'arhy', 'AT2G06510' => 'ath', 'AT4G19130' => 'ath', 'AT5G08020' => 'ath', 'AT5G45400' => 'ath', 'AT5G61000' => 'ath', 'ATR0177G023' => 'atr', 'ATR0598G158' => 'atr', 'ATR0829G100' => 'atr', 'ATR0829G214' => 'atr', 'Atru.chr7.1669' => 'acertr', 'Atru.chr7.1670' => 'acertr', 'Atru.chr7.1671' => 'acertr', 'Atru.chr8.1429' => 'acertr', 'Atru.chr8.1430' => 'acertr', 'Atru.chr9.564' => 'acertr', 'AUR62007386' => 'cqu', 'AUR62008537' => 'cqu', 'AUR62018601' => 'cqu', 'AUR62021554' => 'cqu', 'AUR62025182' => 'cqu', 'AUR62028992' => 'cqu', 'BcaB01g05642' => 'bca', 'BcaB01g05683' => 'bca', 'BcaB02g09847' => 'bca', 'BcaB07g30456' => 'bca', 'BcaB07g30884' => 'bca', 'BcaB08g37297' => 'bca', 'BcaC04g21762' => 'bca', 'BcaC04g23467' => 'bca', 'BcaC05g24775' => 'bca', 'BcaC06g30610' => 'bca', 'BcaC06g32889' => 'bca', 'BcaC06g33184' => 'bca', 'BcaC06g35976' => 'bca', 'BcaC09g50885' => 'bca', 'BcaNung03077' => 'bca', 'BcaNung06900' => 'bca', 'BolC1t03820H' => 'bol', 'BolC2t10676H' => 'bol', 'BolC3t12936H' => 'bol', 'BolC5t29475H' => 'bol', 'BolC7t41345H' => 'bol', 'BolC7t44999H' => 'bol', 'BolC7t45528H' => 'bol', 'BolC7t45846H' => 'bol', 'BolC9t53717H' => 'bol', 'BolC9t55651H' => 'bol', 'BraA02t07945Z' => 'bra', 'BraA03t09704Z' => 'bra', 'BraA03t13794Z' => 'bra', 'BraA03t14263Z' => 'bra', 'BraA07t28419Z' => 'bra', 'BraA09t36368Z' => 'bra', 'BraA09t37781Z' => 'bra', 'C01p38580' => 'bna', 'C02p46200' => 'bna', 'C03p03990' => 'bna', 'C05p07210' => 'bna', 'C07p09270' => 'bna', 'C07p44760' => 'bna', 'C07p50260' => 'bna', 'C09p08030' => 'bna', 'C09p27880' => 'bna', 'CAN.G1228.20' => 'can', 'CAN.G1427.10' => 'can', 'CAN.G148.16' => 'can', 'CAN.G227.6' => 'can', 'CANSAT01G1154' => 'cansat', 'CANSAT54G1889' => 'cansat', 'CANSAT56G3947' => 'cansat', 'CANSAT80G1236' => 'cansat', 'CARHR103830' => 'chi', 'CARHR176670' => 'chi', 'CARHR205160' => 'chi', 'CARHR274710' => 'chi', 'Carub.0003s2727' => 'cru', 'Carub.0006s0691' => 'cru', 'Carub.0007s2202' => 'cru', 'Carub.0008s0271' => 'cru', 'Carub.0008s2169' => 'cru', 'Ca_13349_v3' => 'car', 'Ca_21769_v3' => 'car', 'Ca_21770_v3' => 'car', 'Ca_25103_v3' => 'car', 'CBR_g23266' => 'cbr', 'CBR_g36292' => 'cbr', 'CBR_g37119' => 'cbr', 'CBR_g55372' => 'cbr', 'Cc00_g07660' => 'ccan', 'Cc06_g11960' => 'ccan', 'Cc08_g05150' => 'ccan', 'CDE01G0675' => 'cde', 'CDE02G4126' => 'cde', 'CDE06G1892' => 'cde', 'CDE11G0897' => 'cde', 'CDE12G0883' => 'cde', 'Cfa003026' => 'cfa', 'Cfa012589' => 'cfa', 'Cfa019342' => 'cfa', 'Cfa025402' => 'cfa', 'Ciclev10000254m.g' => 'ccl', 'Ciclev10009939m.g' => 'ccl', 'Ciclev10010492m.g' => 'ccl', 'Ciclev10019317m.g' => 'ccl', 'CiPaw.03G209600' => 'cil', 'CiPaw.11G054100' => 'cil', 'CiPaw.11G103100' => 'cil', 'ClCG06G015600' => 'cla', 'ClCG10G001050' => 'cla', 'ClCG11G001530' => 'cla', 'COL.COLO4_06851' => 'col', 'COL.COLO4_14060' => 'col', 'COL.COLO4_18126' => 'col', 'COL.COLO4_32275' => 'col', 'Cpa.g.sc1086.1' => 'cpa', 'Cpa.g.sc137.10' => 'cpa', 'Cpa.g.sc137.11' => 'cpa', 'Cpa.g.sc28.78' => 'cpa', 'Cre16.g651000' => 'cre', 'Cre17.g718850' => 'cre', 'CsaV3_1G002970' => 'csa', 'CsaV3_2G001260' => 'csa', 'CsaV3_3G001070' => 'csa', 'CSS0005493' => 'camsi', 'CSS0007192' => 'camsi', 'CSS0009813' => 'camsi', 'CSS0020965' => 'camsi', 'CSS0031599' => 'camsi', 'CSS0032107' => 'camsi', 'CSS0033943' => 'camsi', 'CSS0043196' => 'camsi', 'DCAR_004240' => 'dca', 'DCAR_011568' => 'dca', 'DCAR_011569' => 'dca', 'DCAR_023168' => 'dca', 'DCAR_028290' => 'dca', 'Dinv06490' => 'din', 'Dinv08250' => 'din', 'Dinv08482' => 'din', 'Dinv10520' => 'din', 'Dinv17419' => 'din', 'Dinv19531' => 'din', 'Dinv22755' => 'din', 'Dinv22775' => 'din', 'Dinv22867' => 'din', 'Dinv26272' => 'din', 'Dinv26739' => 'din', 'Dinv28015' => 'din', 'Dinv30925' => 'din', 'Dinv41987' => 'din', 'Dinv42372' => 'din', 'Duzib084G0695' => 'dzi', 'Duzib168G1443' => 'dzi', 'Duzib205G0152' => 'dzi', 'Duzib205G1830' => 'dzi', 'ECA240G2629' => 'eca', 'ECA240G4292' => 'eca', 'ECA246G1424' => 'eca', 'ECA246G1912' => 'eca', 'ECA246G2513' => 'eca', 'ECA246G3369' => 'eca', 'ECA247G3309' => 'eca', 'EL10Ac5g11138' => 'bvu', 'EL10Ac5g11968' => 'bvu', 'EL10Ac8g19115' => 'bvu', 'Eucgr.B00599' => 'egr', 'Eucgr.B00601' => 'egr', 'Eucgr.C03561' => 'egr', 'Eucgr.D02593' => 'egr', 'FAN04G2448' => 'fan', 'FAN08G1674' => 'fan', 'FAN08G2719' => 'fan', 'FAN13G0731' => 'fan', 'FAN13G2002' => 'fan', 'FAN18G2954' => 'fan', 'FAN18G3561' => 'fan', 'FAN18G4284' => 'fan', 'FAN19G2973' => 'fan', 'FAN23G0408' => 'fan', 'FAN26G2759' => 'fan', 'FAN26G2843' => 'fan', 'FvH4_1g08261' => 'fve', 'FvH4_5g13771' => 'fve', 'FvH4_5g23941' => 'fve', 'Glyma.05G020600' => 'gma', 'Glyma.09G213300' => 'gma', 'Glyma.09G213500' => 'gma', 'Glyma.15G174100' => 'gma', 'Glyma.17G078700' => 'gma', 'Gohir.A03G070300' => 'ghi', 'Gohir.A12G202700' => 'ghi', 'Gohir.A13G191600' => 'ghi', 'Gohir.D03G096700' => 'ghi', 'Gohir.D12G205400' => 'ghi', 'Gohir.D13G197000' => 'ghi', 'Gorai.003G101500' => 'gra', 'Gorai.008G220300' => 'gra', 'Gorai.013G225700' => 'gra', 'GSVIVG01002032001' => 'vvi', 'GSVIVG01007849001' => 'vvi', 'GSVIVG01014617001' => 'vvi', 'GSVIVG01014619001' => 'vvi', 'GSVIVG01015111001' => 'vvi', 'GSVIVG01020590001' => 'vvi', 'GSVIVG01022784001' => 'vvi', 'GSVIVG01023662001' => 'vvi', 'GSVIVG01023663001' => 'vvi', 'GSVIVG01032319001' => 'vvi', 'GSVIVG01032320001' => 'vvi', 'GSVIVG01035135001' => 'vvi', 'GSVIVG01037062001' => 'vvi', 'GSVIVG01037063001' => 'vvi', 'HanXRQChr02g0044771' => 'han', 'HanXRQChr03g0081181' => 'han', 'HanXRQChr10g0300431' => 'han', 'HanXRQChr10g0300451' => 'han', 'HanXRQChr10g0319611' => 'han', 'HanXRQChr16g0517661' => 'han', 'HanXRQChr17g0539191' => 'han', 'Haze_07734' => 'cav', 'Haze_08068' => 'cav', 'Haze_25975' => 'cav', 'Hma1.2p1_0060F.1_g033050' => 'hma', 'Hma1.2p1_0544F.1_g175470' => 'hma', 'HPP92_012596' => 'vpl', 'HPP92_014050' => 'vpl', 'HPP92_014304' => 'vpl', 'HPP92_019327' => 'vpl', 'Hund02583' => 'sun', 'Hund09917' => 'sun', 'Hund11146' => 'sun', 'Hund26003' => 'sun', 'Lalb_Chr08g0232511' => 'lal', 'Lalb_Chr12g0197221' => 'lal', 'Lalb_Chr13g0302831' => 'lal', 'Lalb_Chr16g0380751' => 'lal', 'Lj2g0016644' => 'lja', 'Lj2g0019271' => 'lja', 'Lj4A909T87' => 'lonja', 'Lj4C905G6' => 'lonja', 'Lj4C909T19' => 'lonja', 'Lj4g0011361' => 'lja', 'Lj4g0021262' => 'lja', 'Lj5A102T96' => 'lonja', 'Lj6g0016995' => 'lja', 'Lj8C334G12' => 'lonja', 'Lj9C471T8' => 'lonja', 'Lsat_1_v5_gn_1_14461' => 'lsa', 'Lsat_1_v5_gn_3_26741' => 'lsa', 'Lsat_1_v5_gn_3_26761' => 'lsa', 'Lsat_1_v5_gn_5_141780' => 'lsa', 'Lsat_1_v5_gn_5_58221' => 'lsa', 'Lsat_1_v5_gn_5_58641' => 'lsa', 'Manes.03G038600' => 'mes', 'Manes.06G084200' => 'mes', 'Manes.17G003800' => 'mes', 'Manes.17G004337' => 'mes', 'Mapoly0109s0044' => 'mpo', 'Mapoly0125s0021' => 'mpo', 'MBI04_g27279_MAGBIO' => 'mbi', 'MBI07_g08573_MAGBIO' => 'mbi', 'MBI07_g46481_MAGBIO' => 'mbi', 'MBI11_g43227_MAGBIO' => 'mbi', 'MBI13_g21846_MAGBIO' => 'mbi', 'MBI17_g04594_MAGBIO' => 'mbi', 'MBI19_g11847_MAGBIO' => 'mbi', 'MCO07G139' => 'mco', 'MCO09G242' => 'mco', 'MD00G1001700' => 'mdo', 'MD02G1087200' => 'mdo', 'MD06G1015200' => 'mdo', 'MD06G1225500' => 'mdo', 'MD14G1212400' => 'mdo', 'MD15G1214800' => 'mdo', 'Medtr1g095050' => 'mtr', 'Medtr2g041270' => 'mtr', 'Medtr3g047950' => 'mtr', 'Medtr4g064240' => 'mtr', 'Medtr4g109580' => 'mtr', 'Medtr4g109590' => 'mtr', 'Medtr5g026880' => 'mtr', 'Medtr5g048670' => 'mtr', 'MELO3C004643.2' => 'cme', 'MELO3C013797.2' => 'cme', 'MELO3C017228.2' => 'cme', 'Migut.A00558' => 'egut', 'Migut.I00367' => 'egut', 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'Potri.003G102700' => 'ptr', 'Potri.015G057300' => 'ptr', 'Potri.018G065300' => 'ptr', 'Pp3c1_20770' => 'ppa', 'Pp3c20_10450' => 'ppa', 'Pp3c23_16880' => 'ppa', 'PRCOL_00003597' => 'pco', 'Prupe.5G020900' => 'ppe', 'Prupe.5G205700' => 'ppe', 'Prupe.7G202500' => 'ppe', 'Psat1g132720' => 'psa', 'Psat2g142080' => 'psa', 'Psat4g047800' => 'psa', 'PSO017G4603' => 'pso', 'PSO063G1428' => 'pso', 'PSO063G2170' => 'pso', 'PSO063G2983' => 'pso', 'PSO063G4795' => 'pso', 'PSO210G0233' => 'pso', 'PSO210G5735' => 'pso', 'PSO478G2603' => 'pso', 'PSO731G0068' => 'pso', 'PSO782G4142' => 'pso', 'QL02p061033' => 'qlo', 'QL10p019699' => 'qlo', 'QL12p000754' => 'qlo', 'QL12p000778' => 'qlo', 'RcHm_v2.0_Chr2g0094351' => 'rch', 'RcHm_v2.0_Chr2g0106871' => 'rch', 'RcHm_v2.0_Chr4g0402291' => 'rch', 'RcHm_v2.0_Chr5g0032071' => 'rch', 'RcHm_v2.0_Chr5g0038981' => 'rch', 'RcHm_v2.0_Chr7g0183161' => 'rch', 'RcHm_v2.0_Chr7g0207931' => 'rch', 'RcHm_v2.0_Chr7g0213381' => 'rch', 'Rhsim05G0012100' => 'rsi', 'Rhsim05G0012200' => 'rsi', 'Rhsim05G0012300' => 'rsi', 'Rhsim08G0145600' => 'rsi', 'Rhsim11G0025300' => 'rsi', 'Rhsim11G0025400' => 'rsi', 'RhsimUnG0172500' => 'rsi', 'Sabra03G0069900' => 'sbr', 'Sabra06G0112600' => 'sbr', 'Sabra06G0113900' => 'sbr', 'Sabra15G0082600' => 'sbr', 'Sabra15G0083000' => 'sbr', 'Sabra18G0057900' => 'sbr', 'Sc01g0007020' => 'sci', 'Sc04g0004360' => 'sci', 'Sc19g0001900' => 'sci', 'Sed0000920' => 'sed', 'Sed0015067' => 'sed', 'Sed0022878' => 'sed', 'Sed0027547' => 'sed', 'SEGI_00003' => 'sgi', 'SEGI_00361' => 'sgi', 'SEGI_00679' => 'sgi', 'SEGI_00714' => 'sgi', 'SEGI_01198' => 'sgi', 'SEGI_01245' => 'sgi', 'SEGI_01360' => 'sgi', 'SEGI_01683' => 'sgi', 'SEGI_01959' => 'sgi', 'SEGI_02614' => 'sgi', 'SEGI_02685' => 'sgi', 'SEGI_02882' => 'sgi', 'SEGI_02899' => 'sgi', 'SEGI_03718' => 'sgi', 'SEGI_04497' => 'sgi', 'SEGI_04520' => 'sgi', 'SEGI_04795' => 'sgi', 'SEGI_05071' => 'sgi', 'SEGI_05176' => 'sgi', 'SEGI_05651' => 'sgi', 'SEGI_05771' => 'sgi', 'SEGI_06287' 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'SEGI_16686' => 'sgi', 'SEGI_16695' => 'sgi', 'SEGI_17357' => 'sgi', 'SEGI_17394' => 'sgi', 'SEGI_17447' => 'sgi', 'SEGI_17936' => 'sgi', 'SEGI_17969' => 'sgi', 'SEGI_18072' => 'sgi', 'SEGI_18457' => 'sgi', 'SEGI_18576' => 'sgi', 'SEGI_18847' => 'sgi', 'SEGI_18898' => 'sgi', 'SEGI_19719' => 'sgi', 'SEGI_19975' => 'sgi', 'SEGI_20150' => 'sgi', 'SEGI_20194' => 'sgi', 'SEGI_20228' => 'sgi', 'SEGI_20289' => 'sgi', 'SEGI_20391' => 'sgi', 'SEGI_20626' => 'sgi', 'SEGI_20679' => 'sgi', 'SEGI_20798' => 'sgi', 'SEGI_21076' => 'sgi', 'SEGI_21469' => 'sgi', 'SEGI_21480' => 'sgi', 'SEGI_21533' => 'sgi', 'SEGI_21607' => 'sgi', 'SEGI_21687' => 'sgi', 'SEGI_21743' => 'sgi', 'SEGI_21806' => 'sgi', 'SEGI_22147' => 'sgi', 'SEGI_22182' => 'sgi', 'SEGI_22206' => 'sgi', 'SEGI_22436' => 'sgi', 'SEGI_22572' => 'sgi', 'SEGI_22792' => 'sgi', 'SEGI_23016' => 'sgi', 'SEGI_23133' => 'sgi', 'SEGI_23378' => 'sgi', 'SEGI_23554' => 'sgi', 'SEGI_23604' => 'sgi', 'SEGI_23854' => 'sgi', 'SEGI_23982' => 'sgi', 'SEGI_24178' => 'sgi', 'SEGI_24246' => 'sgi', 'SEGI_24393' => 'sgi', 'SEGI_24448' => 'sgi', 'SEGI_24539' => 'sgi', 'SEGI_24734' => 'sgi', 'SEGI_25221' => 'sgi', 'SEGI_25449' => 'sgi', 'SEGI_25588' => 'sgi', 'SEGI_25675' => 'sgi', 'SEGI_25824' => 'sgi', 'SEGI_26141' => 'sgi', 'SEGI_26459' => 'sgi', 'SEGI_26730' => 'sgi', 'SEGI_27216' => 'sgi', 'SEGI_27643' => 'sgi', 'SEGI_28292' => 'sgi', 'SEGI_28593' => 'sgi', 'SEGI_28848' => 'sgi', 'SEGI_28956' => 'sgi', 'SEGI_29792' => 'sgi', 'SEGI_29899' => 'sgi', 'SEGI_30527' => 'sgi', 'SEGI_30904' => 'sgi', 'SEGI_30909' => 'sgi', 'SEGI_31235' => 'sgi', 'SEGI_31280' => 'sgi', 'SEGI_31410' => 'sgi', 'SEGI_31607' => 'sgi', 'SEGI_31649' => 'sgi', 'SEGI_31866' => 'sgi', 'SEGI_31907' => 'sgi', 'SEGI_32074' => 'sgi', 'SEGI_32223' => 'sgi', 'SEGI_32376' => 'sgi', 'SEGI_32406' => 'sgi', 'SEGI_32808' => 'sgi', 'SEGI_32947' => 'sgi', 'SEGI_33261' => 'sgi', 'SEGI_33525' => 'sgi', 'SEGI_33528' => 'sgi', 'SEGI_33546' => 'sgi', 'SEGI_33591' => 'sgi', 'SEGI_33676' => 'sgi', 'SEGI_33910' => 'sgi', 'SEGI_34155' => 'sgi', 'SEGI_34291' => 'sgi', 'SEGI_34315' => 'sgi', 'SEGI_34598' => 'sgi', 'SEGI_34761' => 'sgi', 'SEGI_34835' => 'sgi', 'SEGI_34998' => 'sgi', 'SEGI_35352' => 'sgi', 'SEGI_35512' => 'sgi', 'SEGI_35552' => 'sgi', 'SEGI_35732' => 'sgi', 'SEGI_36143' => 'sgi', 'SEGI_36496' => 'sgi', 'SEGI_36527' => 'sgi', 'SEGI_36585' => 'sgi', 'SEGI_36652' => 'sgi', 'SEGI_37497' => 'sgi', 'SEGI_37981' => 'sgi', 'SEGI_38047' => 'sgi', 'SEGI_38212' => 'sgi', 'SEGI_38690' => 'sgi', 'SEGI_38907' => 'sgi', 'SEGI_39067' => 'sgi', 'SEGI_39240' => 'sgi', 'SEGI_39273' => 'sgi', 'SEGI_39914' => 'sgi', 'SEGI_39946' => 'sgi', 'SEGI_40163' => 'sgi', 'SEGI_40188' => 'sgi', 'SEGI_40657' => 'sgi', 'SEGI_40735' => 'sgi', 'SEGI_40772' => 'sgi', 'SEGI_40900' => 'sgi', 'SEGI_41144' => 'sgi', 'SEGI_41182' => 'sgi', 'SEGI_41224' => 'sgi', 'SGA_v2.0_scaffold25G10955' => 'sas', 'SGA_v2.0_scaffold28G11745' => 'sas', 'SGA_v2.0_scaffold333G49017' => 'sas', 'SGA_v2.0_scaffold89G27397' => 'sas', 'SGA_v2.0_scaffold91G28086' => 'sas', 'SGA_v2.0_scaffold96G29068' => 'sas', 'SGA_v2.0_scaffold96G29069' => 'sas', 'SHI07207' => 'shi', 'SHI27089' => 'shi', 'SHI27090' => 'shi', 'SMO026G0001' => 'smo', 'SMO062G0004' => 'smo', 'SMO109G0004' => 'smo', 'SMO112G0064' => 'smo', 'SMO115G0028' => 'smo', 'SMO116G0284' => 'smo', 'SMO119G0217' => 'smo', 'SMO122G0012' => 'smo', 'SMO134G0024' => 'smo', 'SMO137G0045' => 'smo', 'SMO146G0099' => 'smo', 'SMO159G0007' => 'smo', 'SMO169G0286' => 'smo', 'SMO174G0100' => 'smo', 'SMO183G0002' => 'smo', 'SMO202G0046' => 'smo', 'SMO274G0007' => 'smo', 'SMO286G0019' => 'smo', 'SMO320G0001' => 'smo', 'SMO321G0001' => 'smo', 'SMO342G0003' => 'smo', 'SMO354G0006' => 'smo', 'SMO358G0534' => 'smo', 'SMO360G0011' => 'smo', 'SMO364G0527' => 'smo', 'SMO364G0729' => 'smo', 'SMO367G1049' => 'smo', 'Solyc03g115050.3' => 'sly', 'Solyc05g025590.4' => 'sly', 'Solyc08g075840.3' => 'sly', 'Sopen03g034120' => 'spe', 'Sopen05g020190' => 'spe', 'Sopen08g024480' => 'spe', 'Sp2g10350' => 'spa', 'Sp2g24310' => 'spa', 'Sp3g24710' => 'spa', 'Sp6g34920' => 'spa', 'Sp7g17830' => 'spa', 'TAR063G0004' => 'tar', 'TAR091G0002' => 'tar', 'TAR371G0114' => 'tar', 'TAR371G0671' => 'tar', 'TAR374G1226' => 'tar', 'TAR375G1100' => 'tar', 'TAR622G0908' => 'tar', 'TAR624G0651' => 'tar', 'TAR625G0518' => 'tar', 'TAR629G0759' => 'tar', 'TAR629G1891' => 'tar', 'THA.LOC104804633' => 'tha', 'THA.LOC104806192' => 'tha', 'THA.LOC104819400' => 'tha', 'THA.LOC104826582' => 'tha', 'Thecc.03G102500' => 'tca', 'Thecc.03G317500' => 'tca', 'Thecc.09G080300' => 'tca', 'Thecc.09G080500' => 'tca', 'Thhalv10000781m.g' => 'esa', 'Thhalv10001929m.g' => 'esa', 'Thhalv10003822m.g' => 'esa', 'Thhalv10013014m.g' => 'esa', 'Thhalv10024555m.g' => 'esa', 'TPR.G10916' => 'tpr', 'TPR.G15686' => 'tpr', 'TPR.G17277' => 'tpr', 'TPR.G20024' => 'tpr', 'TPR.G2021' => 'tpr', 'TPR.G29493' => 'tpr', 'TWI34G1166' => 'twi', 'TWI36G1694' => 'twi', 'TWI56G1436' => 'twi', 'TWI81G1098' => 'twi', 'unitig_22.g5102' => 'ugi', 'unitig_62.g23555' => 'ugi', 'vmacro00064' => 'vma', 'vmacro17144' => 'vma', 'vmacro17181' => 'vma', 'vmacro17211' => 'vma', 'vmacro17614' => 'vma', 'vmacro19552' => 'vma', 'vmacro19553' => 'vma', 'VMungo0720G0183' => 'vmu', 'VMungo1215G0840' => 'vmu', 'VMungo1215G1142' => 'vmu', 'VMungo1309G1355' => 'vmu', 'Zm00001eb008630' => 'zma', 'Zm00001eb193190' => 'zma', 'Zm00001eb266890' => 'zma', 'Zm00001eb282530' => 'zma', 'Zm00001eb400180' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D000824' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000824' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D000824' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000824' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151