Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
A06p39810 A06 - View
C09p75590 C09 - View
C03p08340 C03 + View
A05p45090 A05 - View
A03p07260 A03 + View
C09p61480 C09 - View
A02p03130 A02 + View
A10p23340 A10 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G12740 LG-5 - View
Aethionema arabicum Aa31LG11G13960 LG-11 - View
Acer truncatum Atru.chr8.529 chr8 + View
Actinidia chinensis Actinidia18071 Lachesis_group11 + View
Actinidia chinensis Actinidia17597 Lachesis_group21 + View
Actinidia chinensis Actinidia36263 Lachesis_group4 + View
Actinidia chinensis Actinidia26261 Lachesis_group3 + View
Arabidopsis lyrata AL6G26480 scaffold_6 + View
Arabidopsis lyrata AL3G11460 scaffold_3 - View
Avicennia marina MSTRG.2981 ScioBoG_102835_HRSCAF_103059 + View
Avicennia marina MSTRG.3369 ScioBoG_102836_HRSCAF_103072 + View
Avicennia marina MSTRG.23865 ScioBoG_3895_HRSCAF_3912 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.XMS8ZM PF04833 - COBRA-like protein (COBRA) arahy.Tifrunner.gnm1.Arahy.01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.FK15VW PF04833 - COBRA-like protein (COBRA) arahy.Tifrunner.gnm1.Arahy.20 + View
Arabidopsis thaliana AT5G15630 COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family Encodes a member of the COBRA family%2C similar to phytochelatin synthetase. Involved in secondary cell wall biosynthesis. Mutants make smaller plants with reduced levels of cellulose and cell wall sugars. IRREGULAR XYLEM 6 (IRX6)%3B INVOLVED IN: secondary cell wall biogenesis%3B LOCATED IN: plasma membrane%2C anchored to membrane%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored%2C plant (InterPro:IPR006918)%2C COBRA-like (InterPro:IPR017391)%3B BEST Arabidopsis thaliana protein match is: COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family (TAIR:AT5G60920.1)%3B Has 379 Blast hits to 368 proteins in 30 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 379%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT3G02210 COBRA-like protein 1 precursor COBRA-like protein 1 precursor (COBL1)%3B CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored%2C plant (InterPro:IPR006918)%2C COBRA-like (InterPro:IPR017391)%3B BEST Arabidopsis thaliana protein match is: COBRA-like protein 2 precursor (TAIR:AT3G29810.1)%3B Has 380 Blast hits to 369 proteins in 30 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 380%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaB01g05036 ChrB01 - View
Brassica carinata BcaC06g30855 ChrC06 - View
Brassica carinata BcaC04g18946 ChrC04 - View
Brassica oleracea BolC2t06711H C2 + View
Brassica oleracea BolC5t35099H C5 + View
Brassica oleracea BolC3t13340H C3 + View
Brassica rapa BraA05t23152Z A05 + View
Brassica rapa BraA02t05283Z A02 + View
Brassica rapa BraA03t10048Z A03 + View
Brassica rapa BraA10t44402Z A10 - View
Camellia sinensis var. sinensis CSS0034060 PREDICTED: protein COBRA-like [Sesamum indicum] Chr2 + View
Camellia sinensis var. sinensis CSS0039433 COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family [Theobroma cacao] Chr1 + View
Cannabis sativa CANSAT64G0169 NC_044379.1 + View
Corylus avellana Haze_14395 Similar to BC1LP1: COBRA-like protein 7 (Oryza sativa subsp. japonica OX%3D39947) 5 + View
Carpinus fangiana Cfa007681 Cfa03 + View
Cardamine hirsuta CARHR076180 Protein COBRA, putative Chr3 - View
Cardamine hirsuta CARHR197690 COBRA-like protein Chr6 - View
Citrullus lanatus ClCG07G015950 COBRA-like protein CG_Chr07 + View
Carica papaya Cpa.g.sc14.204 supercontig_14 + View
Capsella rubella Carub.0006s1378 PTHR31673//PTHR31673:SF2 - FAMILY NOT NAMED // COBRA-LIKE PROTEIN 4 scaffold_6 + View
Capsella rubella Carub.0003s0133 PF04833 - COBRA-like protein (COBRA) scaffold_3 - View
Durio zibethinus Duzib211G0487 NW_019168049.1 + View
Durio zibethinus Duzib205G0824 NW_019168381.1 + View
Erigeron canadensis ECA232G2665 Conyza_canadensis_scaffold:2 + View
Eucalyptus grandis Eucgr.B00628 Chr02 + View
Eucalyptus grandis Eucgr.K02540 Chr11 + View
Eutrema salsugineum Thhalv10013604m.g PTHR31673:SF2 - COBRA-LIKE PROTEIN 4 scaffold_2 + View
Eutrema salsugineum Thhalv10020716m.g PF04833 - COBRA-like protein (COBRA) scaffold_13 + View
Gossypium hirsutum Gohir.A03G071000 PTHR31673//PTHR31673:SF2 - FAMILY NOT NAMED // COBRA-LIKE PROTEIN 4 A03 - View
Gossypium hirsutum Gohir.D03G097400 PTHR31673//PTHR31673:SF2 - FAMILY NOT NAMED // COBRA-LIKE PROTEIN 4 D03 - View
Gossypium hirsutum Gohir.A07G067400 PF04833 - COBRA-like protein (COBRA) A07 - View
Glycine max Glyma.05G019101 PTHR31673:SF3 - COBRA-LIKE EXTRACELLULAR GLYCOSYL-PHOSPHATIDYL INOSITOL-ANCHORED FAMILY PROTEIN-RELATED Gm05 - View
Gossypium raimondii Gorai.003G102500 Chr03 - View
Lonicera japonica Lj4A121G74 GWHAAZE00000004 + View
Lonicera japonica Lju361P1T3 GWHAAZE00000081 + View
Lactuca sativa Lsat_1_v5_gn_4_173220 PF04833 - COBRA-like protein (COBRA) Lsat_1_v8_lg_4 + View
Malus domestica MD17G1064200 COBRA-like protein 1 precursor Chr17 + View
Malus domestica MD06G1203700 COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family Chr06 + View
Manihot esculenta Manes.14G087750 Chromosome14 + View
Manihot esculenta Manes.02G058100 Chromosome02 + View
Manihot esculenta Manes.06G082300 Chromosome06 + View
Nicotiana tabacum Nitab4.5_0000212g0310 COBRA, plant Nitab4.5_0000212 + View
Olea europaea Oeu007075.1 scaffold126 + View
Olea europaea Oeu033403.1 chr2 - View
Petunia axillaris Peaxi162Scf00166g00335 COBRA-like protein 4 Peaxi162Scf00166 + View
Punica granatum PGR044G1428 NC_045134.1 + View
Prunus persica Prupe.3G250300 PTHR31673:SF2 - COBRA-LIKE PROTEIN 4 Pp03 + View
Populus trichocarpa Potri.017G098600 PTHR31673:SF3 - COBRA-LIKE EXTRACELLULAR GLYCOSYL-PHOSPHATIDYL INOSITOL-ANCHORED FAMILY PROTEIN-RELATED Chr17 + View
Populus trichocarpa Potri.015G060000 PTHR31673:SF3 - COBRA-LIKE EXTRACELLULAR GLYCOSYL-PHOSPHATIDYL INOSITOL-ANCHORED FAMILY PROTEIN-RELATED Chr15 + View
Phaseolus vulgaris Phvul.003G183000 PTHR31673:SF3 - COBRA-LIKE EXTRACELLULAR GLYCOSYL-PHOSPHATIDYL INOSITOL-ANCHORED FAMILY PROTEIN-RELATED Chr03 - View
Phaseolus vulgaris Phvul.008G029000 PTHR31673:SF2 - COBRA-LIKE PROTEIN 4 Chr08 + View
Rhododendron simsii Rhsim08G0076100 chr08 + View
Salix brachista Sabra04G0070500 GWHAAZH00000004 + View
Salix brachista Sabra17G0085000 GWHAAZH00000017 + View
Solanum lycopersicum Solyc02g089120.4 COBRA-like protein (AHRD V3.3 *** K4BC66_SOLLC) SL4.0ch02 + View
Solanum lycopersicum Solyc03g114880.3 COBRA-like protein (AHRD V3.3 *** A0A2G3A1W9_CAPAN) SL4.0ch03 + View
Schrenkiella parvula Sp6g28480 PTHR31673:SF2 - COBRA-LIKE PROTEIN 4 ch6-6 - View
Schrenkiella parvula Sp3g01280 PF04833 - COBRA-like protein (COBRA) ch3-1 - View
Solanum pennellii Sopen02g015980 Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions. | COBRA (COB) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: response to salt stress, multidimensional cell growth, cellulose microfibril organization | LOCATED IN: in 6 components | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant , COBRA-like | BEST Arabidopsis thaliana protein match is: COBRA-like protein 1 precursor Spenn-ch02 - View
Solanum pennellii Sopen02g033910 Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions. | COBRA (COB) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: response to salt stress, multidimensional cell growth, cellulose microfibril organization | LOCATED IN: in 6 components | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant , COBRA-like | BEST Arabidopsis thaliana protein match is: COBRA-like protein 1 precursor Spenn-ch02 + View
Solanum pennellii Sopen03g033960 Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions. | COBRA (COB) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: response to salt stress, multidimensional cell growth, cellulose microfibril organization | LOCATED IN: in 6 components | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant , COBRA-like | BEST Arabidopsis thaliana protein match is: COBRA-like protein 1 precursor Spenn-ch03 + View
Solanum tuberosum PGSC0003DMG400001465 Protein COBRA ST4.03ch02 + View
Solanum tuberosum PGSC0003DMG400026565 Protein COBRA ST4.03ch02 - View
Solanum tuberosum PGSC0003DMG400024530 Protein COBRA ST4.03ch03 + View
Trochodendron aralioides TAR622G1167 group8 - View
Trochodendron aralioides TAR629G1899 group0 + View
Tarenaya hassleriana THA.LOC104802979 COBRA-like protein 1 NW_010970490.1 - View
Tarenaya hassleriana THA.LOC104820989 COBRA-like protein 4 NW_010966372.1 - View
Tarenaya hassleriana THA.LOC104822322 COBRA-like protein 1 isoform X1 NW_010966665.1 + View
Tripterygium wilfordii TWI60G0587 NC_052246.1 + View
Tripterygium wilfordii TWI81G0581 NC_052251.1 + View
Tripterygium wilfordii TWI32G0175 NC_052254.1 + View
Vaccinium macrocarpon vmacro18136 Similar to BC1L6: COBRA-like protein 1 (Oryza sativa subsp. japonica OX%3D39947) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1215G3268 CM024074.1 + View