Gene: AT3G02210
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G02210
- Transcript Identifier AT3G02210.1
- Gene Type Coding gene
- Location Chr3 : 409352-411478 : negative
Gene Family Information
- ID HOM05D000600
- #Genes/#Species 940/96
- Phylogenetic origin
- ID ORTHO05D000432
- #Genes/#Species 939/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G02210.1
- symbol COBL1
- uniprot Q9SRT7
Descriptions
- Description COBRA-like protein 1 precursor
- Computational description COBRA-like protein 1 precursor (COBL1); CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918), COBRA-like (InterPro:IPR017391); BEST Arabidopsis thaliana protein match is: COBRA-like protein 2 precursor (TAIR:AT3G29810.1); Has 380 Blast hits to 369 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 380; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010215 | IEA | Gene Ontology | cellulose microfibril organization | |
| GO:0010215 | IEA | InterPro | cellulose microfibril organization | |
| GO:0052324 | IBA | Gene Ontology | plant-type cell wall cellulose biosynthetic process | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | IEA | GOA Database | plasma membrane | |
| GO:0005886 | ISM | Gene Ontology | plasma membrane | |
| GO:0031225 | IEA | GOA Database | anchored component of membrane | |
| GO:0031225 | TAS | Gene Ontology | anchored component of membrane | 2 |
| GO:0031225 | IEA | InterPro | anchored component of membrane | |
| GO:0046658 | IBA | Gene Ontology | anchored component of plasma membrane | 1 |
| GO:0016020 | IEA | GOA Database | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR006918 | COBRA, plant |
| Mapman id | Description |
|---|---|
| 21.1.2.2 | Cell wall organisation.cellulose.cellulose-hemicellulose network assembly.regulatory protein (COB) |