Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G1700 LG-5 + View
Acer truncatum Atru.chr5.1014 chr5 + View
Actinidia chinensis Actinidia21002 Lachesis_group9 - View
Actinidia chinensis Actinidia21408 Lachesis_group19 - View
Actinidia chinensis Actinidia25844 Lachesis_group15 - View
Arabidopsis lyrata AL6G51170 scaffold_6 - View
Avicennia marina MSTRG.21683 ScioBoG_26769_HRSCAF_26899 - View
Aquilegia oxysepala Aqoxy2G02780 CHR02 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.X1CI0G K08737 - DNA mismatch repair protein MSH6 (MSH6) arahy.Tifrunner.gnm1.Arahy.16 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.LRQA6N K08737 - DNA mismatch repair protein MSH6 (MSH6) arahy.Tifrunner.gnm1.Arahy.06 + View
Arabidopsis thaliana AT4G02070 MUTS homolog 6 encodes a DNA mismatch repair homolog of human MutS gene%2C MSH6. There are four MutS genes in Arabidopsis%2C MSH2%2C MSH3%2C MSH6%2C and MSH7%2C which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH6 bound the (+T) substrate strongly%2C (T/G) well%2C and (+AAG) no better than it did a (T/A) homoduplex. MUTS homolog 6 (MSH6)%3B FUNCTIONS IN: damaged DNA binding%3B INVOLVED IN: mismatch repair%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 16 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein Msh6 (InterPro:IPR017261)%2C DNA mismatch repair protein MutS%2C clamp (InterPro:IPR007861)%2C DNA mismatch repair protein MutS%2C connector (InterPro:IPR007860)%2C DNA mismatch repair protein MutS%2C core (InterPro:IPR007696)%2C DNA mismatch repair protein MutS-like%2C N-terminal (InterPro:IPR007695)%2C DNA mismatch repair protein MutS%2C N-terminal (InterPro:IPR016151)%2C DNA mismatch repair protein MutS%2C C-terminal (InterPro:IPR000432)%2C DNA mismatch repair protein MutS-homologue MSH6 (InterPro:IPR015536)%2C Tudor domain (InterPro:IPR002999)%3B BEST Arabidopsis thaliana protein match is: homolog of DNA mismatch repair protein MSH3 (TAIR:AT4G25540.1)%3B Has 29702 Blast hits to 21889 proteins in 2967 species: Archae - 234%3B Bacteria - 11721%3B Metazoa - 3243%3B Fungi - 2118%3B Plants - 3658%3B Viruses - 802%3B Other Eukaryotes - 7926 (source: NCBI BLink). Chr4 + View
Brassica carinata BcaB01g02414 ChrB01 + View
Brassica carinata BcaC01g06778 ChrC01 - View
Brassica napus A03p31260 A03 - View
Brassica oleracea BolC3t16097H C3 - View
Brassica rapa BraA03t12306Z A03 - View
Beta vulgaris EL10As5g23522 K08737 - DNA mismatch repair protein MSH6 (MSH6) Scaffold_0005 - View
Camellia sinensis var. sinensis CSS0018335 PREDICTED: DNA mismatch repair protein MSH6 [Vitis vinifera] Chr13 - View
Cannabis sativa CANSAT25G3364 NC_044370.1 - View
Cicer arietinum L. Ca_09207_v3 Ca_LG3_v3 - View
Corylus avellana Haze_05032 Similar to MSH6: DNA mismatch repair protein MSH6 (Arabidopsis thaliana OX%3D3702) 2 - View
Coffea canephora Cc01_g21360 DNA mismatch repair protein Msh6-1 chr1 - View
Citrus clementina Ciclev10018525m.g scaffold_3 - View
Ceratophyllum demersum CDE02G2952 1 + View
Carpinus fangiana Cfa005809 Cfa02 + View
Cardamine hirsuta CARHR249610 DNA mismatch repair protein muts Chr8 - View
Carya illinoinensis CiPaw.07G116800 K08737 - DNA mismatch repair protein MSH6 (MSH6) Chr07 - View
Citrullus lanatus ClCG09G005140 DNA mismatch repair protein MutS CG_Chr09 + View
Cucumis melo MELO3C015928.2 DNA mismatch repair protein MSH6 chr01 + View
Corchorus olitorius COL.COLO4_23240 hypothetical protein AWUE01018173.1 + View
Chenopodium quinoa AUR62011818 MSH6: DNA mismatch repair protein MSH6 C_Quinoa_Scaffold_2008 + View
Chenopodium quinoa AUR62024662 MSH6: DNA mismatch repair protein MSH6 C_Quinoa_Scaffold_1992 + View
Capsella rubella Carub.0006s3516 PTHR11361//PTHR11361:SF89 - DNA MISMATCH REPAIR MUTS RELATED PROTEINS // DNA MISMATCH REPAIR PROTEIN MSH6 scaffold_6 - View
Cucumis sativus L. CsaV3_7G029930 DNA mismatch repair protein MutS chr7 - View
Davidia involucrata Dinv33112 GWHABJS00000010 - View
Durio zibethinus Duzib138G0299 NW_019167893.1 + View
Erigeron canadensis ECA236G3964 Conyza_canadensis_scaffold:3 - View
Eucalyptus grandis Eucgr.K03542 Chr11 - View
Erythranthe guttata Migut.D00086 scaffold_4 + View
Eutrema salsugineum Thhalv10028364m.g K08737 - DNA mismatch repair protein MSH6 (MSH6) scaffold_3 + View
Fragaria x ananassa FAN08G2155 K08737 - DNA mismatch repair protein MSH6 (MSH6) Fvb5-3 - View
Fragaria vesca FvH4_5g39410 PTHR11361//PTHR11361:SF89 - DNA MISMATCH REPAIR MUTS RELATED PROTEINS // DNA MISMATCH REPAIR PROTEIN MSH6 Fvb5 - View
Gossypium hirsutum Gohir.D07G132500 K08737 - DNA mismatch repair protein MSH6 (MSH6) D07 - View
Gossypium hirsutum Gohir.A07G128100 K08737 - DNA mismatch repair protein MSH6 (MSH6) A07 - View
Glycine max Glyma.19G216000 K08737 - DNA mismatch repair protein MSH6 (MSH6) Gm19 - View
Glycine max Glyma.03G219033 PTHR11361//PTHR11361:SF89 - DNA MISMATCH REPAIR MUTS RELATED PROTEINS // DNA MISMATCH REPAIR PROTEIN MSH6 Gm03 + View
Gossypium raimondii Gorai.001G143900 Chr01 - View
Lupinus albus Lalb_Chr15g0078211 K08737 - DNA mismatch repair protein MSH6 (MSH6) Lalb_Chr15 + View
Lotus japonicus Lj1g0020273 PTHR11361:SF89 - DNA MISMATCH REPAIR PROTEIN MSH6 chr1 - View
Lonicera japonica Lj1A18T22 GWHAAZE00000001 + View
Magnolia biondii MBI19_g17401_MAGBIO AED:0.17 Chr19 + View
Malus domestica MD11G1315200 MUTS homolog 6 Chr11 + View
Malus domestica MD03G1296000 MUTS homolog 6 Chr03 + View
Manihot esculenta Manes.01G227200 Chromosome01 - View
Medicago truncatula Medtr7g109470 DNA mismatch repair MSH3-like protein chr7 - View
Nelumbo nucifera Nn3g21675 chr3 - View
Nicotiana tabacum Nitab4.5_0001301g0050 DNA mismatch repair protein MutS-homologue MSH6, DNA mismatch repair protein MutS-like, N-terminal, DNA mismatch repair protein MutS, connector domain, DNA mismatch repair protein Msh6, DNA mismatch repair protein MutS, C-terminal, DNA mismatch repair protein MutS, core, DNA mismatch repair protein MutS, N-terminal, DNA mismatch repair protein MutS, clamp, P-loop containing nucleoside triphosphate hydrolase, Tudor domain Nitab4.5_0001301 + View
Olea europaea Oeu038017.1 chr12 + View
Petunia axillaris Peaxi162Scf00691g00115 homolog of DNA mismatch repair protein MSH3 Peaxi162Scf00691 - View
Punica granatum PGR044G1584 NC_045134.1 - View
Prunus persica Prupe.8G271300 PTHR11361:SF89 - DNA MISMATCH REPAIR PROTEIN MSH6 Pp08 - View
Pisum sativum Psat3g020000 MutS domain V chr3LG5 + View
Papaver somniferum PSO210G6116 NC_039359.1 + View
Populus trichocarpa Potri.014G121601 PF01624//PF05192 - MutS domain I (MutS_I) // MutS domain III (MutS_III) Chr14 + View
Phaseolus vulgaris Phvul.001G212500 PTHR11361:SF89 - DNA MISMATCH REPAIR PROTEIN MSH6 Chr01 - View
Quercus lobata QL12p020098 12 + View
Rhododendron simsii Rhsim01G0290300 chr01 - View
Striga asiatica SGA_v2.0_scaffold334G49065 scaffold334 - View
Salvia bowleyana SalBow3G2997 GWHASIU00000006 + View
Salix brachista Sabra14G0090200 GWHAAZH00000014 + View
Simmondsia chinensis Sc17g0000490 GWHAASQ00000017 + View
Sechium edule Sed0020923 LG09 - View
Solanum lycopersicum Solyc01g079520.3 DNA mismatch repair protein MutS (AHRD V3.3 *** A0A200R263_9MAGN) SL4.0ch01 + View
Schrenkiella parvula Sp6g01950 PTHR11361:SF89 - DNA MISMATCH REPAIR PROTEIN MSH6 ch6-1 + View
Solanum pennellii Sopen01g031290 encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH6 bound the (+T) substrate strongly, (T/G) well, and (+AAG) no better than it did a (T/A) homoduplex. | MUTS homolog 6 (MSH6) | FUNCTIONS IN: damaged DNA binding | INVOLVED IN: mismatch repair | LOCATED IN: chloroplast | EXPRESSED IN: 16 plant structures | EXPRESSED DURING: 8 growth stages | CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein Msh6 , DNA mismatch repair protein MutS, clamp , DNA mismatch repair protein MutS, connector , DNA mismatch repair protein MutS, core , DNA mismatch repair protein MutS-like, N-terminal , DNA mismatch repair protein MutS, N-terminal , DNA mismatch repair protein MutS, C-terminal , DNA mismatch repair protein MutS-homologue MSH6 , Tudor domain | BEST Arabidopsis thaliana protein match is: homolog of DNA mismatch repair protein MSH3 ., DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize), DNA mismatch repair protein MutS, C-terminal Spenn-ch01 + View
Selenicereus undatus Hund09627 Scaffold_10417 - View
Theobroma cacao Thecc.01G312500 MUTS Chromosome_1 - View
Trifolium pratense TPR.G4121 Tp57577_TGAC_v2_LG6 + View
Tripterygium wilfordii TWI36G0759 NC_052237.1 - View
Vaccinium macrocarpon vmacro15113 Similar to MSH6: DNA mismatch repair protein MSH6 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1383G2073 CM024070.1 - View
Vitis vinifera GSVIVG01028112001 chr7 - View