Gene: Ah.11g049290

General Information

Structural Information

  • Species Amaranthus hybridus
  • Gene Identifier Ah.11g049290
  • Transcript Identifier Ah.11g049290-v1.1.a1
  • Gene Type Coding gene
  • Location AmaHy_arrow1_Scaffold_11 : 19657546-19667870 : positive

Gene Family Information

  • ID HOM05D001061
  • #Genes/#Species 575/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Ah.11g049290-v1.1.a1

Descriptions

  • Description DNA mismatch repair protein MSH6 (AtMSH6) (MutS protein homolog 6)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006298
IEA
InterPromismatch repair
GO:0006290
ISO
PLAZA Integrative Orthologypyrimidine dimer repair AT4G02070

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0030983
IEA
InterPromismatched DNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G02070
GO:0003684
ISO
PLAZA Integrative Orthologydamaged DNA binding AT4G02070

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR045076 DNA mismatch repair MutS family
IPR007860 DNA mismatch repair protein MutS, connector domain
IPR007696 DNA mismatch repair protein MutS, core
IPR000432 DNA mismatch repair protein MutS, C-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR036187 DNA mismatch repair protein MutS, core domain superfamily
IPR016151 DNA mismatch repair protein MutS, N-terminal
IPR036678 MutS, connector domain superfamily
IPR007861 DNA mismatch repair protein MutS, clamp
IPR002999 Tudor domain
IPR007695 DNA mismatch repair protein MutS-like, N-terminal
IPR017261 DNA mismatch repair protein MutS/MSH
Mapman id Description
14.7.1.3 DNA damage response.mismatch repair (MMR).MSH2-x mismatch repair heterodimer components.component MSH6