Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Ah.02g113730 AmaHy_arrow1_Scaffold_2 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G2040 LG-11 - View
Acer truncatum Atru.chr9.336 chr9 + View
Actinidia chinensis Actinidia19020 Lachesis_group9 + View
Actinidia chinensis Actinidia37610 Lachesis_group13 - View
Actinidia chinensis Actinidia35011 Lachesis_group2 + View
Avicennia marina MSTRG.4440 ScioBoG_102837_HRSCAF_103074 + View
Avicennia marina MSTRG.9618 ScioBoG_12795_HRSCAF_12848 - View
Aquilegia oxysepala Aqoxy3G03485 CHR03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.2F1UPX K12127 - pseudo-response regulator 1 (TOC1, APRR1) arahy.Tifrunner.gnm1.Arahy.01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.D90B1M K12127 - pseudo-response regulator 1 (TOC1, APRR1) arahy.Tifrunner.gnm1.Arahy.11 + View
Arabidopsis thaliana AT5G61380 CCT motif -containing response regulator protein Pseudo response regulator involved in the generation of circadian rhythms. TOC1 appears to shorten the period of circumnutation speed. TOC1 contributes to the plant fitness (carbon fixation%2C biomass) by influencing the circadian clock period. PRR3 may increase the stability of TOC1 by preventing interactions between TOC1 and the F-box protein ZTL. Expression of TOC1 is correlated with rhythmic changes in chromatin organization. TIMING OF CAB EXPRESSION 1 (TOC1)%3B CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006)%2C Signal transduction response regulator%2C receiver domain (InterPro:IPR001789)%2C CCT domain (InterPro:IPR010402)%3B BEST Arabidopsis thaliana protein match is: pseudo-response regulator 3 (TAIR:AT5G60100.3)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Camellia sinensis var. sinensis CSS0032055 unnamed protein product [Coffea canephora] Chr2 - View
Capsicum annuum CAN.G479.63 PGAv.1.6.scaffold479 - View
Cicer arietinum L. Ca_21808_v3 Ca_LG7_v3 - View
Carpinus fangiana Cfa018911 Cfa08 - View
Carya illinoinensis CiPaw.11G047100 K12127 - pseudo-response regulator 1 (TOC1, APRR1) Chr11 + View
Citrullus lanatus ClCG04G012090 Pseudo response regulator CG_Chr04 - View
Cucumis melo MELO3C001999.2 two-component response regulator-like APRR1 chr12 - View
Carica papaya Cpa.g.sc13.294 supercontig_13 - View
Chenopodium quinoa AUR62021636 APRR1: Two-component response regulator-like APRR1 C_Quinoa_Scaffold_1675 - View
Chenopodium quinoa AUR62008459 APRR1: Two-component response regulator-like APRR1 C_Quinoa_Scaffold_3422 + View
Capsella rubella Carub.0008s2205 K12127 - pseudo-response regulator 1 (TOC1, APRR1) scaffold_8 + View
Daucus carota DCAR_016576 hypothetical protein DCARv2_Chr5 + View
Davidia involucrata Dinv10655 GWHABJS00000006 - View
Davidia involucrata Dinv38743 GWHABJS00000019 - View
Durio zibethinus Duzib068G0503 NW_019167838.1 + View
Durio zibethinus Duzib205G1832 NW_019168381.1 + View
Erigeron canadensis ECA247G3052 Conyza_canadensis_scaffold:7 - View
Eucalyptus grandis Eucgr.B00537 Chr02 + View
Erythranthe guttata Migut.I00209 scaffold_9 + View
Eutrema salsugineum Thhalv10003924m.g K12127 - pseudo-response regulator 1 (TOC1, APRR1) scaffold_6 - View
Fragaria x ananassa FAN08G1337 PTHR26402:SF465 - TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR1-RELATED Fvb5-3 + View
Fragaria x ananassa FAN18G1413 K12127 - pseudo-response regulator 1 (TOC1, APRR1) Fvb5-1 - View
Fragaria x ananassa FAN13G2746 K12127 - pseudo-response regulator 1 (TOC1, APRR1) Fvb5-2 - View
Fragaria vesca FvH4_5g14560 K12127 - pseudo-response regulator 1 (TOC1, APRR1) Fvb5 - View
Gossypium hirsutum Gohir.D03G094200 K12127 - pseudo-response regulator 1 (TOC1, APRR1) D03 + View
Gossypium hirsutum Gohir.A03G067700 K12127 - pseudo-response regulator 1 (TOC1, APRR1) A03 + View
Glycine max Glyma.17G102200 K12127 - pseudo-response regulator 1 (TOC1, APRR1) Gm17 + View
Glycine max Glyma.04G166300 K12127 - pseudo-response regulator 1 (TOC1, APRR1) Gm04 - View
Glycine max Glyma.05G025000 K12127 - pseudo-response regulator 1 (TOC1, APRR1) Gm05 - View
Glycine max Glyma.06G196200 K12127 - pseudo-response regulator 1 (TOC1, APRR1) Gm06 + View
Gossypium raimondii Gorai.003G098300 Chr03 + View
Hydrangea macrophylla Hma1.2p1_0322F.1_g125070 Hma1.2p1_0322F.1 - View
Lupinus albus Lalb_Chr07g0178171 PTHR26402:SF465 - TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR1-RELATED Lalb_Chr07 + View
Lupinus albus Lalb_Chr08g0235491 K12127 - pseudo-response regulator 1 (TOC1, APRR1) Lalb_Chr08 - View
Lotus japonicus Lj4g0002884 K12127 - pseudo-response regulator 1 (TOC1, APRR1) chr4 - View
Lonicera japonica Lj5A108G51 GWHAAZE00000005 - View
Lonicera japonica Lj9C466G6 GWHAAZE00000009 + View
Lactuca sativa Lsat_1_v5_gn_5_21481 Lsat_1_v8_lg_5 - View
Lactuca sativa Lsat_1_v5_gn_1_14320 K12127 - pseudo-response regulator 1 (TOC1, APRR1) Lsat_1_v8_lg_1 + View
Malus domestica MD06G1197300 CCT motif -containing response regulator protein Chr06 + View
Malus domestica MD14G1204500 CCT motif -containing response regulator protein Chr14 + View
Manihot esculenta Manes.14G081500 Chromosome14 - View
Manihot esculenta Manes.06G089800 Chromosome06 + View
Medicago truncatula Medtr4g108880 two-component response regulator-like APRR7 protein chr4 + View
Nicotiana tabacum Nitab4.5_0001211g0280 Signal transduction response regulator, receiver domain, CheY-like superfamily, CCT domain Nitab4.5_0001211 - View
Petunia axillaris Peaxi162Scf00274g00351 Two-component response regulator-like APRR1 Peaxi162Scf00274 - View
Punica granatum PGR083G0168 NC_045133.1 + View
Prunus persica Prupe.5G197800 Pp05 + View
Pisum sativum Psat4g049800 Response regulator receiver domain chr4LG4 - View
Pisum sativum Psat5g199360 Response regulator receiver domain chr5LG3 + View
Papaver somniferum PSO478G1572 NC_039361.1 - View
Phaseolus vulgaris Phvul.003G188400 Chr03 - View
Phaseolus vulgaris Phvul.009G185500 K12127 - pseudo-response regulator 1 (TOC1, APRR1) Chr09 - View
Quercus lobata QL10p017642 10 + View
Rosa chinensis RcHm_v2.0_Chr7g0181971 RcHm_v2.0_Chr7 + View
Rhododendron simsii Rhsim12G0154100 chr12 - View
Striga asiatica SGA_v2.0_scaffold313G48334 scaffold313 - View
Salvia bowleyana SalBow7G4352 GWHASIU00000005 + View
Simmondsia chinensis Sc12g0006500 GWHAASQ00000012 - View
Sechium edule Sed0015977 LG08 + View
Sechium edule Sed0008795 LG12 + View
Sechium edule Sed0020767 LG01 - View
Solanum lycopersicum Solyc03g115770.3 Two-component response regulator-like APRR5 (AHRD V3.3 *** A0A2G3CZB4_CAPCH) SL4.0ch03 - View
Solanum lycopersicum Solyc06g069690.4 Two-component response regulator-like APRR5 (AHRD V3.3 *** A0A2G3CZB4_CAPCH) SL4.0ch06 - View
Solanum pennellii Sopen03g034750 Pseudo response regulator involved in the generation of circadian rhythms. TOC1 appears to shorten the period of circumnutation speed. TOC1 contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. PRR3 may increase the stability of TOC1 by preventing interactions between TOC1 and the F-box protein ZTL. Expression of TOC1 is correlated with rhythmic changes in chromatin organization. | TIMING OF CAB EXPRESSION 1 (TOC1) | CONTAINS InterPro DOMAIN/s: CheY-like , Signal transduction response regulator, receiver domain , CCT domain | BEST Arabidopsis thaliana protein match is: pseudo-response regulator 3 Spenn-ch03 - View
Solanum pennellii Sopen06g026990 Pseudo response regulator involved in the generation of circadian rhythms. TOC1 appears to shorten the period of circumnutation speed. TOC1 contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. PRR3 may increase the stability of TOC1 by preventing interactions between TOC1 and the F-box protein ZTL. Expression of TOC1 is correlated with rhythmic changes in chromatin organization. | TIMING OF CAB EXPRESSION 1 (TOC1) | CONTAINS InterPro DOMAIN/s: CheY-like , Signal transduction response regulator, receiver domain , CCT domain | BEST Arabidopsis thaliana protein match is: pseudo-response regulator 3 Spenn-ch06 - View
Solanum tuberosum PGSC0003DMG400033048 Sensory transduction histidine kinase ST4.03ch06 - View
Solanum tuberosum PGSC0003DMG400019518 Pseudo response regulator ST4.03ch03 - View
Selenicereus undatus Hund09823 Scaffold_10417 + View
Trochodendron aralioides TAR629G1644 group0 - View
Theobroma cacao Thecc.03G093700 CCT motif-containing response regulator protein Chromosome_3 + View
Tarenaya hassleriana THA.LOC104801462 two-component response regulator-like APRR1 NW_010960188.1 + View
Trifolium pratense TPR.G11840 Tp57577_TGAC_v2_LG3 - View
Tripterygium wilfordii TWI15G0625 NC_052247.1 - View
Tripterygium wilfordii TWI60G1095 NC_052246.1 + View
Vaccinium macrocarpon vmacro16524 Similar to APRR1: Two-component response regulator-like APRR1 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1309G1477 CM024072.1 + View
Vigna mungo VMungo1215G0660 CM024074.1 + View
Vitis vinifera GSVIVG01007970001 chr17 + View