Gene: AT5G61380

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G61380
  • Transcript Identifier AT5G61380.1
  • Gene Type Coding gene
  • Location Chr5 : 24675540-24678176 : positive

Gene Family Information

  • ID HOM05D003878
  • #Genes/#Species 179/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G61380.1
  • symbol TOC1
  • Alias APRR1,AtTOC1,TIMING OF CAB EXPRESSION 1,PRR1,PSEUDO-RESPONSE REGULATOR 1
  • full_name TIMING OF CAB EXPRESSION 1
  • uniprot Q9LKL2

Descriptions

  • Description CCT motif -containing response regulator protein
  • Computational description TIMING OF CAB EXPRESSION 1 (TOC1); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: pseudo-response regulator 3 (TAIR:AT5G60100.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
TAS
Gene Ontologytranscription, DNA-templated1
GO:0000160
IEA
GOA Databasephosphorelay signal transduction system
GO:0000160
IEA
InterProphosphorelay signal transduction system
GO:0009908
IEA
GOA Databaseflower development
GO:0048511
IEA
GOA Databaserhythmic process
GO:0010468
IMP
Gene Ontologyregulation of gene expression2
GO:0010629
IDA
Gene Ontologynegative regulation of gene expression3
GO:0010031
IMP
Gene Ontologycircumnutation4
GO:0006355
ISS
TAS
Gene Ontologyregulation of transcription, DNA-templated5 6
GO:0007623
IEP
TAS
Gene Ontologycircadian rhythm5 7

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding8
GO:0005515
IEA
InterProprotein binding
GO:0003700
IDA
Gene OntologyDNA-binding transcription factor activity3
GO:0003677
IDA
Gene OntologyDNA binding3
GO:0000156
ISS
Gene Ontologyphosphorelay response regulator activity
GO:0000976
IDA
Gene Ontologytranscription cis-regulatory region binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
TAS
Gene Ontologynucleus1 5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010402 CCT domain
IPR001789 Signal transduction response regulator, receiver domain
IPR011006 CheY-like superfamily
Mapman id Description
27.1.3 Multi-process regulation.circadian clock system.evening oscillator protein (TOC1)