Gene: Carub.0008s2205

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0008s2205
  • Transcript Identifier Carub.0008s2205.1
  • Gene Type Coding gene
  • Location scaffold_8 : 10954789-10957324 : positive

Gene Family Information

  • ID HOM05D003878
  • #Genes/#Species 179/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0008s2205.v1.1
  • pacid 39252860
  • synonym Carubv10028382m.g

Descriptions

  • Description K12127 - pseudo-response regulator 1 (TOC1, APRR1)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000160
IEA
InterProphosphorelay signal transduction system
GO:0010031
ISO
PLAZA Integrative Orthologycircumnutation AT5G61380
GO:0010629
ISO
PLAZA Integrative Orthologynegative regulation of gene expression AT5G61380
GO:0006351
ISO
PLAZA Integrative Orthologytranscription, DNA-templated AT5G61380
GO:0010468
ISO
PLAZA Integrative Orthologyregulation of gene expression AT5G61380
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT5G61380
GO:0007623
ISO
PLAZA Integrative Orthologycircadian rhythm AT5G61380

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT5G61380
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT5G61380
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G61380

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G61380

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010402 CCT domain
IPR011006 CheY-like superfamily
IPR001789 Signal transduction response regulator, receiver domain
Mapman id Description
27.1.3 Multi-process regulation.circadian clock system.evening oscillator protein (TOC1)