Gene: Sopen03g034750

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g034750
  • Transcript Identifier Sopen03g034750.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 69844927-69850388 : negative

Gene Family Information

  • ID HOM05D003878
  • #Genes/#Species 179/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g034750.1

Descriptions

  • Description Pseudo response regulator involved in the generation of circadian rhythms. TOC1 appears to shorten the period of circumnutation speed. TOC1 contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. PRR3 may increase the stability of TOC1 by preventing interactions between TOC1 and the F-box protein ZTL. Expression of TOC1 is correlated with rhythmic changes in chromatin organization. | TIMING OF CAB EXPRESSION 1 (TOC1) | CONTAINS InterPro DOMAIN/s: CheY-like , Signal transduction response regulator, receiver domain , CCT domain | BEST Arabidopsis thaliana protein match is: pseudo-response regulator 3
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000160
IEA
InterProphosphorelay signal transduction system
GO:0010031
ISO
PLAZA Integrative Orthologycircumnutation AT5G61380
GO:0010629
ISO
PLAZA Integrative Orthologynegative regulation of gene expression AT5G61380
GO:0006351
ISO
PLAZA Integrative Orthologytranscription, DNA-templated AT5G61380
GO:0010468
ISO
PLAZA Integrative Orthologyregulation of gene expression AT5G61380
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT5G61380
GO:0007623
ISO
PLAZA Integrative Orthologycircadian rhythm AT5G61380

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT5G61380
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT5G61380
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G61380

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G61380

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001789 Signal transduction response regulator, receiver domain
IPR011006 CheY-like superfamily
IPR010402 CCT domain
Mapman id Description
27.1.3 Multi-process regulation.circadian clock system.evening oscillator protein (TOC1)