Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT3G56170 Ca-2+ dependent nuclease Encodes a calcium-dependent nuclease with similarity to staphylococcal nuclease. Ca-2+ dependent nuclease (CAN)%3B FUNCTIONS IN: nuclease activity%3B INVOLVED IN: N-terminal protein myristoylation%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Staphylococcal nuclease (SNase-like) (InterPro:IPR006021)%2C Staphylococcal nuclease (SNase-like)%2C OB-fold (InterPro:IPR016071)%2C Thermonuclease active site (InterPro:IPR002071)%3B BEST Arabidopsis thaliana protein match is: Staphylococcal nuclease homologue (TAIR:AT2G40410.2)%3B Has 3061 Blast hits to 3061 proteins in 776 species: Archae - 16%3B Bacteria - 1825%3B Metazoa - 0%3B Fungi - 167%3B Plants - 86%3B Viruses - 2%3B Other Eukaryotes - 965 (source: NCBI BLink). Chr3 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G19170 LG-5 - View
Aethionema arabicum Aa31LG10G11050 LG-10 + View
Acer truncatum Atru.chr12.132 chr12 - View
Actinidia chinensis Actinidia29736 Lachesis_group22 - View
Actinidia chinensis Actinidia33891 Lachesis_group3 + View
Arabidopsis lyrata AL5G37490 scaffold_5 + View
Arabidopsis lyrata AL4G38230 scaffold_4 + View
Avicennia marina MSTRG.27293 ScioBoG_8578_HRSCAF_8617 - View
Amaranthus hybridus Ah.10g036070 Staphylococcal-like nuclease CAN2 (EC 3.1.31.-) (Calcium-dependent nuclease 2) (AtCAN2) (Ca(2+)-dependent nuclease 2) AmaHy_arrow1_Scaffold_10 - View
Aquilegia oxysepala Aqoxy4G02183 CHR04 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.L5P6KQ PTHR12302//PTHR12302:SF4 - EBNA2 BINDING PROTEIN P100 // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.10 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.RB5H3E PF00565 - Staphylococcal nuclease homologue (SNase) arahy.Tifrunner.gnm1.Arahy.17 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.2Y6RK6 PF00565 - Staphylococcal nuclease homologue (SNase) arahy.Tifrunner.gnm1.Arahy.07 - View
Amborella trichopoda ATR0594G145 AmTr_v1.0_scaffold00023 + View
Brassica carinata BcaB01g00023 ChrB01 - View
Brassica carinata BcaC07g39931 ChrC07 + View
Brassica napus A09p49140 A09 + View
Brassica napus C08p31460 C08 + View
Brassica napus A05p06070 A05 - View
Brassica napus C04p06990 C04 - View
Brassica oleracea BolC4t22320H C4 - View
Brassica oleracea BolC8t50766H C8 + View
Brassica rapa BraA05t19570Z A05 - View
Brassica rapa BraA09t40367Z A09 + View
Beta vulgaris EL10Ac2g04917 PTHR12302//PTHR12302:SF4 - EBNA2 BINDING PROTEIN P100 // SUBFAMILY NOT NAMED Chr2_EL10_PGA_scaffold6 + View
Beta vulgaris EL10Ac2g04305 3.1.31.1 - Micrococcal nuclease / Micrococcal endonuclease Chr2_EL10_PGA_scaffold6 - View
Camellia sinensis var. sinensis CSS0023990 PREDICTED: staphylococcal-like nuclease CAN2 [Sesamum indicum] Chr1 + View
Cicer arietinum L. Ca_06011_v3 Ca_LG2_v3 + View
Corylus avellana Haze_17308 Similar to CAN2: Staphylococcal-like nuclease CAN2 (Arabidopsis thaliana OX%3D3702) 11 + View
Coffea canephora Cc02_g05810 Uncharacterized 38.1 kDa protein chr2 - View
Citrus clementina Ciclev10032052m.g scaffold_4 + View
Ceratophyllum demersum CDE06G1620 4 + View
Carpinus fangiana Cfa001243 Cfa01 - View
Cardamine hirsuta CARHR166320 Nuclease Chr5 + View
Cardamine hirsuta CARHR135520 Ca(2+)-dependent nuclease-like protein Chr4 + View
Carya illinoinensis CiPaw.01G303100 3.1.31.1 - Micrococcal nuclease / Micrococcal endonuclease Chr01 + View
Citrullus lanatus ClCG07G004750 Ca(2+)-dependent nuclease family protein CG_Chr07 + View
Cucumis melo MELO3C020101.2 staphylococcal-like nuclease CAN2 chr10 + View
Carica papaya Cpa.g.sc19.108 supercontig_19 - View
Chenopodium quinoa AUR62022966 CAN2: Staphylococcal-like nuclease CAN2 C_Quinoa_Scaffold_3378 + View
Chenopodium quinoa AUR62012324 CAN2: Staphylococcal-like nuclease CAN2 C_Quinoa_Scaffold_1995 + View
Capsella rubella Carub.0004s2266 3.1.31.1 - Micrococcal nuclease / Micrococcal endonuclease scaffold_4 + View
Capsella rubella Carub.0005s2295 3.1.31.1 - Micrococcal nuclease / Micrococcal endonuclease scaffold_5 + View
Cucumis sativus L. CsaV3_5G010670 Nuclease chr5 + View
Davidia involucrata Dinv10567 GWHABJS00000009 + View
Davidia involucrata Dinv21803 GWHABJS00000004 - View
Durio zibethinus Duzib114G0231 NW_019167926.1 - View
Erigeron canadensis ECA238G4654 Conyza_canadensis_scaffold:6 + View
Erigeron canadensis ECA232G2578 Conyza_canadensis_scaffold:2 - View
Eucalyptus grandis Eucgr.J00157 Chr10 - View
Erythranthe guttata Migut.F00615 scaffold_6 - View
Eutrema salsugineum Thhalv10006101m.g 3.1.31.1 - Micrococcal nuclease / Micrococcal endonuclease scaffold_19 - View
Eutrema salsugineum Thhalv10016915m.g PTHR12302//PTHR12302:SF4 - EBNA2 BINDING PROTEIN P100 // SUBFAMILY NOT NAMED scaffold_10 + View
Fragaria x ananassa FAN10G1113 PTHR12302//PTHR12302:SF4 - EBNA2 BINDING PROTEIN P100 // SUBFAMILY NOT NAMED Fvb7-1 + View
Fragaria x ananassa FAN03G0925 PTHR12302//PTHR12302:SF4 - EBNA2 BINDING PROTEIN P100 // SUBFAMILY NOT NAMED Fvb7-3 - View
Fragaria x ananassa FAN01G2059 PTHR12302//PTHR12302:SF4 - EBNA2 BINDING PROTEIN P100 // SUBFAMILY NOT NAMED Fvb7-4 - View
Fragaria vesca FvH4_7g25420 PTHR12302//PTHR12302:SF4 - EBNA2 BINDING PROTEIN P100 // SUBFAMILY NOT NAMED Fvb7 + View
Gossypium hirsutum Gohir.D06G165800 3.1.31.1 - Micrococcal nuclease / Micrococcal endonuclease D06 - View
Gossypium hirsutum Gohir.A06G160000 3.1.31.1 - Micrococcal nuclease / Micrococcal endonuclease A06 - View
Glycine max Glyma.02G260600 3.1.31.1 - Micrococcal nuclease / Micrococcal endonuclease Gm02 - View
Gossypium raimondii Gorai.010G193300 Chr10 - View
Helianthus annuus HanXRQChr07g0203541 Probable uncharacterized 38.1 kDa protein HanXRQChr07 + View
Lupinus albus Lalb_Chr04g0250341 3.1.31.1 - Micrococcal nuclease / Micrococcal endonuclease Lalb_Chr04 - View
Lotus japonicus LjContig00357g0017303 3.1.31.1 - Micrococcal nuclease / Micrococcal endonuclease Contig00357 - View
Lonicera japonica Lj8A59T33 GWHAAZE00000008 - View
Lactuca sativa Lsat_1_v5_gn_9_60581 Lsat_1_v8_lg_9 + View
Lactuca sativa Lsat_1_v5_gn_2_125840 3.1.31.1 - Micrococcal nuclease / Micrococcal endonuclease Lsat_1_v8_lg_2 + View
Lactuca sativa Lsat_1_v5_gn_9_58560 Lsat_1_v8_lg_9 - View
Malus domestica MD07G1228600 Staphylococcal nuclease homologue Chr07 + View
Malus domestica MD01G1160800 Staphylococcal nuclease homologue Chr01 + View
Manihot esculenta Manes.10G007000 Chromosome10 - View
Manihot esculenta Manes.07G136500 Chromosome07 + View
Medicago truncatula Medtr5g083720 Ca(2+)-dependent nuclease-like protein chr5 + View
Petunia axillaris Peaxi162Scf00284g00136 Ca-2+ dependent nuclease Peaxi162Scf00284 - View
Punica granatum PGR044G1828 NC_045134.1 + View
Prunus persica Prupe.2G258400 PTHR12302//PTHR12302:SF4 - EBNA2 BINDING PROTEIN P100 // SUBFAMILY NOT NAMED Pp02 + View
Populus trichocarpa Potri.010G182500 3.1.31.1 - Micrococcal nuclease / Micrococcal endonuclease Chr10 - View
Populus trichocarpa Potri.008G074800 3.1.31.1 - Micrococcal nuclease / Micrococcal endonuclease Chr08 + View
Phaseolus vulgaris Phvul.008G219500 3.1.31.1 - Micrococcal nuclease / Micrococcal endonuclease Chr08 - View
Quercus lobata QL08p064095 8 + View
Rosa chinensis RcHm_v2.0_Chr1g0371391 RcHm_v2.0_Chr1 + View
Rhododendron simsii Rhsim03G0149000 chr03 + View
Striga asiatica SGA_v2.0_scaffold60G20942 scaffold60 - View
Striga asiatica SGA_v2.0_scaffold44G16649 scaffold44 - View
Salix brachista Sabra08G0055400 GWHAAZH00000008 + View
Salix brachista Sabra10G0139900 GWHAAZH00000010 - View
Simmondsia chinensis Sc10g0002780 GWHAASQ00000010 + View
Sechium edule Sed0006213 LG04 + View
Solanum lycopersicum Solyc06g050720.3 staphylococcal-like nuclease CAN2 (AHRD V3.3 *** A0A2I4EQZ2_9ROSI) SL4.0ch06 + View
Schrenkiella parvula Sp4g22740 PTHR12302//PTHR12302:SF4 - EBNA2 BINDING PROTEIN P100 // SUBFAMILY NOT NAMED ch4-6 + View
Schrenkiella parvula Sp5g06330 3.1.31.1 - Micrococcal nuclease / Micrococcal endonuclease ch5-1 - View
Solanum pennellii Sopen06g016280 Staphylococcal nuclease homologue | FUNCTIONS IN: hydrolase activity, acting on ester bonds, nuclease activity, nucleic acid binding | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Staphylococcal nuclease (SNase-like) , Staphylococcal nuclease (SNase-like), OB-fold | BEST Arabidopsis thaliana protein match is: Ca-2+ dependent nuclease Spenn-ch06 + View
Solanum tuberosum PGSC0003DMG400017899 Nuclease ST4.03ch06 + View
Selenicereus undatus Hund15864 Scaffold_33677 - View
Selenicereus undatus Hund13521 Scaffold_33679 - View
Trochodendron aralioides TAR369G0379 group18 - View
Theobroma cacao Thecc.10G008400 Staphylococcal nuclease Chromosome_10 - View
Tarenaya hassleriana THA.LOC104811876 staphylococcal-like nuclease CAN2 NW_010960187.1 + View
Tripterygium wilfordii TWI09G0137 NC_052245.1 - View
Vaccinium macrocarpon vmacro06918 Similar to CAN1: Staphylococcal-like nuclease CAN1 (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0647G0953 CM024073.1 + View
Vanilla planifolia HPP92_001133 Nuclease *** CM028150.1 + View
Vitis vinifera GSVIVG01032729001 chr13 + View