Gene: PGSC0003DMG400017899

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400017899
  • Transcript Identifier PGSC0003DMT400046112
  • Gene Type Coding gene
  • Location ST4.03ch06 : 30647249-30648870 : positive

Gene Family Information

  • ID HOM05D002787
  • #Genes/#Species 248/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37449786
  • id PGSC0003DMG400017899.v4.03
  • uniprot M1BIN8

Descriptions

  • Description Nuclease
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0006308
ISO
PLAZA Integrative OrthologyDNA catabolic process AT2G40410
GO:0006401
ISO
PLAZA Integrative OrthologyRNA catabolic process AT2G40410

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0004518
IBA
IEA
GOA Databasenuclease activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G56170
GO:0004520
ISO
PLAZA Integrative Orthologyendodeoxyribonuclease activity AT2G40410
GO:0004521
ISO
PLAZA Integrative Orthologyendoribonuclease activity AT2G40410

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus
GO:0005737
IBA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016071 Staphylococcal nuclease (SNase-like), OB-fold
IPR035437 SNase-like, OB-fold superfamily
Mapman id Description
35.1 not assigned.annotated