Gene: AT2G40410

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G40410
  • Transcript Identifier AT2G40410.2
  • Gene Type Coding gene
  • Location Chr2 : 16873509-16875215 : positive

Gene Family Information

  • ID HOM05D002787
  • #Genes/#Species 248/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G40410.2
  • symbol AtCaN2
  • Alias CAN2,calcium dependent nuclease 2
  • full_name Ca2+-dependent nuclease
  • uniprot F4IH31

Descriptions

  • Description Ca(2 )-dependent nuclease family protein
  • Computational description Staphylococcal nuclease homologue; FUNCTIONS IN: nuclease activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Ca-2 dependent nuclease (TAIR:AT3G56170.1); Has 74 Blast hits to 74 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
  • Computational description Staphylococcal nuclease homologue; FUNCTIONS IN: hydrolase activity, acting on ester bonds, nuclease activity, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Staphylococcal nuclease (SNase-like) (InterPro:IPR006021), Staphylococcal nuclease (SNase-like), OB-fold (InterPro:IPR016071); BEST Arabidopsis thaliana protein match is: Ca-2 dependent nuclease (TAIR:AT3G56170.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006308
IDA
Gene OntologyDNA catabolic process1
GO:0006401
IDA
Gene OntologyRNA catabolic process1
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0090502
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, endonucleolytic

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004520
IDA
Gene Ontologyendodeoxyribonuclease activity1
GO:0004521
IDA
Gene Ontologyendoribonuclease activity1
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0004519
IEA
GOA Databaseendonuclease activity
GO:0004518
IBA
IEA
GOA Databasenuclease activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IBA
Gene Ontologycytoplasm2
GO:0005886
IEA
GOA Databaseplasma membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016071 Staphylococcal nuclease (SNase-like), OB-fold
IPR035437 SNase-like, OB-fold superfamily
Mapman id Description
35.1 not assigned.annotated