Functional clusters
Information
- Type InterPro
- Description Major facilitator superfamily
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr12 | 5 | CH_acertr_824 | 3 | 4 | 0.000341969 |
| Actinidia chinensis | Lachesis_group13 | 5 | CH_ach_567 | 4 | 25 | 0.000605417 |
| Arabidopsis lyrata | scaffold_3 | 5 | CH_aly_578 | 3 | 4 | 0.000370534 |
| Aquilegia oxysepala | CHR02 | 5 | CH_aox_519 | 3 | 6 | 0.000703352 |
| Cannabis sativa | NC_044376.1 | 5 | CH_cansat_433 | 3 | 4 | 0.000184567 |
| Coffea canephora | chr2 | 5 | CH_ccan_93 | 4 | 7 | 0.000000000535612 |
| Capsella rubella | scaffold_3 | 5 | CH_cru_241 | 4 | 4 | 0.000000159199 |
| Cucumis sativus L. | chr2 | 5 | CH_csa_322 | 3 | 3 | 0.0000625495 |
| Daucus carota | DCARv2_Chr9 | 5 | CH_dca_372 | 4 | 9 | 0.0000308125 |
| Eucalyptus grandis | Chr07 | 5 | CH_egr_531 | 5 | 6 | 0.00000000111768 |
| Erythranthe guttata | scaffold_2 | 5 | CH_egut_284 | 4 | 4 | 0.00000012965 |
| Glycine max | Gm06 | 5 | CH_gma_610 | 3 | 3 | 0.000103522 |
| Lupinus albus | Lalb_Chr19 | 5 | CH_lal_53 | 7 | 11 | 0.0000000000000340383 |
| Lactuca sativa | Lsat_1_v8_lg_9 | 5 | CH_lsa_238 | 5 | 7 | 0.00000000187923 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 5 | CH_lsa_629 | 3 | 3 | 0.0000685466 |
| Medicago truncatula | chr8 | 5 | CH_mtr_555 | 4 | 5 | 0.000000105297 |
| Oryza sativa ssp. japonica | chr11 | 5 | CH_osa_226 | 5 | 11 | 0.0000000344363 |
| Petunia axillaris | Peaxi162Scf00173 | 5 | CH_pax_505 | 3 | 3 | 0.000145533 |
| Punica granatum | NC_045129.1 | 5 | CH_pgr_521 | 3 | 4 | 0.00024098 |
| Physcomitrium patens | scaffold_30 | 5 | CH_ppa_22 | 9 | 77 | 0.000000000609553 |
| Papaver somniferum | NC_039358.1 | 5 | CH_pso_1064 | 3 | 4 | 0.000279629 |
| Phaseolus vulgaris | Chr11 | 5 | CH_pvu_133 | 5 | 5 | 0.0000000000709663 |
| Rhododendron simsii | chr10 | 5 | CH_rsi_1048 | 3 | 6 | 0.000968221 |
| Rhododendron simsii | chr08 | 5 | CH_rsi_824 | 3 | 4 | 0.000193976 |
| Sequoiadendron giganteum | chr1 | 5 | CH_sgi_1497 | 3 | 3 | 0.0000176568 |
| Solanum lycopersicum | SL4.0ch05 | 5 | CH_sly_316 | 4 | 4 | 0.000000151603 |
| Solanum lycopersicum | SL4.0ch01 | 5 | CH_sly_656 | 3 | 3 | 0.000107616 |
| Solanum pennellii | Spenn-ch01 | 5 | CH_spe_592 | 3 | 3 | 0.00006952 |
| Solanum pennellii | Spenn-ch05 | 5 | CH_spe_95 | 6 | 8 | 0.00000000000251386 |
| Solanum tuberosum | ST4.03ch01 | 5 | CH_stu_639 | 3 | 3 | 0.0000725761 |
| Tarenaya hassleriana | NW_010967707.1 | 5 | CH_tha_108 | 4 | 4 | 0.000000152329 |
| Trifolium pratense | Tp57577_TGAC_v2_LG7 | 5 | CH_tpr_99 | 5 | 5 | 0.000000000123634 |
| Vigna mungo | CM024076.1 | 5 | CH_vmu_277 | 4 | 12 | 0.0000184602 |
| Vanilla planifolia | CM028158.1 | 5 | CH_vpl_324 | 3 | 3 | 0.0000268287 |
| Vitis vinifera | chr13 | 5 | CH_vvi_387 | 4 | 7 | 0.00000213704 |
| Acer truncatum | chr12 | 6 | CH_acertr_824 | 3 | 4 | 0.000341969 |
| Actinidia chinensis | Lachesis_group13 | 6 | CH_ach_567 | 4 | 25 | 0.000605417 |
| Arabidopsis lyrata | scaffold_3 | 6 | CH_aly_578 | 3 | 4 | 0.000370534 |
| Aquilegia oxysepala | CHR02 | 6 | CH_aox_519 | 3 | 6 | 0.000703352 |
| Cannabis sativa | NC_044376.1 | 6 | CH_cansat_433 | 3 | 4 | 0.000184567 |
| Coffea canephora | chr2 | 6 | CH_ccan_93 | 4 | 7 | 0.000000000535612 |
| Cucumis melo | chr03 | 6 | CH_cme_273 | 3 | 3 | 0.0000300077 |
| Capsella rubella | scaffold_3 | 6 | CH_cru_241 | 4 | 4 | 0.000000159199 |
| Cucumis sativus L. | chr2 | 6 | CH_csa_322 | 3 | 3 | 0.0000625495 |
| Daucus carota | DCARv2_Chr9 | 6 | CH_dca_372 | 4 | 9 | 0.0000308125 |
| Eucalyptus grandis | Chr07 | 6 | CH_egr_531 | 5 | 6 | 0.00000000111768 |
| Erythranthe guttata | scaffold_2 | 6 | CH_egut_284 | 4 | 4 | 0.00000012965 |
| Fragaria x ananassa | Fvb2-2 | 6 | CH_fan_1055 | 3 | 4 | 0.000480619 |
| Glycine max | Gm06 | 6 | CH_gma_610 | 3 | 3 | 0.000103522 |
| Lupinus albus | Lalb_Chr19 | 6 | CH_lal_53 | 7 | 11 | 0.0000000000000340383 |
| Lactuca sativa | Lsat_1_v8_lg_9 | 6 | CH_lsa_238 | 5 | 7 | 0.00000000187923 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 6 | CH_lsa_629 | 3 | 3 | 0.0000685466 |
| Medicago truncatula | chr8 | 6 | CH_mtr_555 | 4 | 5 | 0.000000105297 |
| Oryza sativa ssp. japonica | chr11 | 6 | CH_osa_226 | 5 | 11 | 0.0000000344363 |
| Petunia axillaris | Peaxi162Scf00173 | 6 | CH_pax_505 | 3 | 3 | 0.000145533 |
| Punica granatum | NC_045129.1 | 6 | CH_pgr_521 | 3 | 4 | 0.00024098 |
| Physcomitrium patens | scaffold_30 | 6 | CH_ppa_22 | 9 | 77 | 0.000000000609553 |
| Papaver somniferum | NC_039358.1 | 6 | CH_pso_1064 | 3 | 4 | 0.000279629 |
| Phaseolus vulgaris | Chr11 | 6 | CH_pvu_133 | 5 | 5 | 0.0000000000709663 |
| Rhododendron simsii | chr10 | 6 | CH_rsi_1048 | 3 | 6 | 0.000968221 |
| Rhododendron simsii | chr08 | 6 | CH_rsi_824 | 3 | 4 | 0.000193976 |
| Sequoiadendron giganteum | chr1 | 6 | CH_sgi_1497 | 3 | 3 | 0.0000176568 |
| Solanum lycopersicum | SL4.0ch05 | 6 | CH_sly_316 | 4 | 4 | 0.000000151603 |
| Solanum lycopersicum | SL4.0ch01 | 6 | CH_sly_656 | 3 | 3 | 0.000107616 |
| Solanum pennellii | Spenn-ch01 | 6 | CH_spe_592 | 3 | 3 | 0.00006952 |
| Solanum pennellii | Spenn-ch05 | 6 | CH_spe_95 | 6 | 8 | 0.00000000000251386 |
| Solanum tuberosum | ST4.03ch01 | 6 | CH_stu_639 | 3 | 3 | 0.0000725761 |
| Tarenaya hassleriana | NW_010967707.1 | 6 | CH_tha_108 | 4 | 4 | 0.000000152329 |
| Trifolium pratense | Tp57577_TGAC_v2_LG7 | 6 | CH_tpr_99 | 5 | 5 | 0.000000000123634 |
| Vigna mungo | CM024076.1 | 6 | CH_vmu_277 | 4 | 12 | 0.0000184602 |
| Vanilla planifolia | CM028158.1 | 6 | CH_vpl_324 | 3 | 3 | 0.0000268287 |
| Vitis vinifera | chr13 | 6 | CH_vvi_387 | 4 | 7 | 0.00000213704 |
Available child term results
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |