Functional clusters
Information
- Type InterPro
- Description Nitrate transporter
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr3 | 5 | CH_acertr_146 | 4 | 4 | 0.000000000751597 |
| Acer truncatum | chr11 | 5 | CH_acertr_147 | 4 | 4 | 0.000000000751597 |
| Acer truncatum | chr8 | 5 | CH_acertr_386 | 3 | 3 | 0.00000213213 |
| Aquilegia oxysepala | CHR03 | 5 | CH_aox_471 | 2 | 2 | 0.000481193 |
| Aquilegia oxysepala | CHR01 | 5 | CH_aox_472 | 2 | 2 | 0.000481193 |
| Brassica carinata | ChrC01 | 5 | CH_bca_243 | 5 | 13 | 0.000000000197754 |
| Brassica carinata | ChrB01 | 5 | CH_bca_435 | 4 | 7 | 0.000000020987 |
| Brassica carinata | ChrB08 | 5 | CH_bca_855 | 3 | 3 | 0.00000224548 |
| Brassica napus | C03 | 5 | CH_bna_204 | 5 | 11 | 0.0000000000827244 |
| Brassica napus | C09 | 5 | CH_bna_895 | 3 | 5 | 0.0000256228 |
| Brassica oleracea | C3 | 5 | CH_bol_264 | 4 | 14 | 0.00000019054 |
| Beta vulgaris | Chr6_EL10_PGA_scaffold0 | 5 | CH_bvu_126 | 4 | 6 | 0.00000000536091 |
| Beta vulgaris | Chr7_EL10_PGA_scaffold5 | 5 | CH_bvu_264 | 3 | 3 | 0.00000493415 |
| Camellia sinensis var. sinensis | Chr6 | 5 | CH_camsi_1415 | 2 | 2 | 0.000687821 |
| Camellia sinensis var. sinensis | Chr11 | 5 | CH_camsi_1416 | 2 | 2 | 0.000687821 |
| Cannabis sativa | NC_044375.1 | 5 | CH_cansat_248 | 3 | 5 | 0.000000646683 |
| Coffea canephora | chr1 | 5 | CH_ccan_62 | 4 | 28 | 0.0000000000233684 |
| Citrus clementina | scaffold_8 | 5 | CH_ccl_316 | 3 | 3 | 0.000000201881 |
| Ceratophyllum demersum | 4 | 5 | CH_cde_495 | 2 | 2 | 0.000789796 |
| Ceratophyllum demersum | 5 | 5 | CH_cde_80 | 3 | 3 | 0.0000000935703 |
| Corchorus olitorius | AWUE01018461.1 | 5 | CH_col_201 | 2 | 2 | 0.000876296 |
| Carica papaya | supercontig_65 | 5 | CH_cpa_648 | 2 | 2 | 0.000950661 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2088 | 5 | CH_cqu_465 | 3 | 3 | 0.00000229002 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3429 | 5 | CH_cqu_466 | 3 | 3 | 0.00000229002 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2493 | 5 | CH_cqu_539 | 3 | 4 | 0.00000915759 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2716 | 5 | CH_cqu_540 | 3 | 4 | 0.00000915759 |
| Daucus carota | DCARv2_Chr2 | 5 | CH_dca_7 | 12 | 22 | 3.15308e-30 |
| Davidia involucrata | GWHABJS00000010 | 5 | CH_din_796 | 2 | 2 | 0.000750188 |
| Erigeron canadensis | Conyza_canadensis_scaffold:9 | 5 | CH_eca_110 | 4 | 5 | 0.0000000000474338 |
| Erythranthe guttata | scaffold_4 | 5 | CH_egut_136 | 5 | 7 | 0.00000000000569622 |
| Erythranthe guttata | scaffold_2 | 5 | CH_egut_440 | 3 | 5 | 0.0000227322 |
| Fragaria vesca | Fvb4 | 5 | CH_fve_826 | 2 | 2 | 0.000883652 |
| Glycine max | Gm12 | 5 | CH_gma_933 | 2 | 2 | 0.00079707 |
| Helianthus annuus | HanXRQChr11 | 5 | CH_han_162 | 5 | 7 | 0.000000000000451916 |
| Helianthus annuus | HanXRQChr01 | 5 | CH_han_332 | 4 | 7 | 0.00000000433034 |
| Lotus japonicus | chr3 | 5 | CH_lja_518 | 2 | 2 | 0.000429046 |
| Lonicera japonica | GWHAAZE00000001 | 5 | CH_lonja_125 | 6 | 7 | 1.01934e-17 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 5 | CH_lsa_38 | 8 | 11 | 6.34171e-23 |
| Magnolia biondii | Chr18 | 5 | CH_mbi_1010 | 2 | 2 | 0.000291397 |
| Micromonas commoda | Chr_01 | 5 | CH_mco_5 | 3 | 9 | 0.0000493092 |
| Malus domestica | Chr11 | 5 | CH_mdo_461 | 3 | 3 | 0.000000120796 |
| Manihot esculenta | Chromosome11 | 5 | CH_mes_321 | 3 | 4 | 0.000000447414 |
| Marchantia polymorpha | scaffold_20 | 5 | CH_mpo_4 | 9 | 14 | 4.49259e-23 |
| Medicago truncatula | chr4 | 5 | CH_mtr_1239 | 2 | 3 | 0.000369764 |
| Olea europaea | chr8 | 5 | CH_oeu_608 | 2 | 2 | 0.000533789 |
| Oryza sativa ssp. japonica | chr02 | 5 | CH_osa_630 | 2 | 2 | 0.000316874 |
| Petunia axillaris | Peaxi162Scf00115 | 5 | CH_pax_27 | 6 | 6 | 1.79255e-17 |
| Prunus persica | Pp06 | 5 | CH_ppe_747 | 2 | 2 | 0.000447577 |
| Populus trichocarpa | Chr09 | 5 | CH_ptr_786 | 2 | 2 | 0.000867002 |
| Salvia bowleyana | GWHASIU00000006 | 5 | CH_sbo_310 | 3 | 3 | 0.000000173889 |
| Salix brachista | GWHAAZH00000015 | 5 | CH_sbr_588 | 2 | 2 | 0.000378084 |
| Sechium edule | LG01 | 5 | CH_sed_386 | 2 | 2 | 0.000214026 |
| Sequoiadendron giganteum | chr6 | 5 | CH_sgi_1347 | 3 | 4 | 0.00000234909 |
| Solanum lycopersicum | SL4.0ch11 | 5 | CH_sly_301 | 3 | 3 | 0.000000103353 |
| Solanum pennellii | Spenn-ch11 | 5 | CH_spe_294 | 3 | 3 | 0.000000166188 |
| Solanum pennellii | Spenn-ch06 | 5 | CH_spe_295 | 3 | 3 | 0.000000166188 |
| Solanum tuberosum | ST4.03ch11 | 5 | CH_stu_453 | 3 | 5 | 0.00000330801 |
| Theobroma cacao | Chromosome_9 | 5 | CH_tca_328 | 3 | 3 | 0.000000281615 |
| Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_677 | 2 | 2 | 0.000557543 |
| Acer truncatum | chr3 | 6 | CH_acertr_146 | 4 | 4 | 0.000000000751597 |
| Acer truncatum | chr11 | 6 | CH_acertr_147 | 4 | 4 | 0.000000000751597 |
| Acer truncatum | chr8 | 6 | CH_acertr_386 | 3 | 3 | 0.00000213213 |
| Aquilegia oxysepala | CHR03 | 6 | CH_aox_471 | 2 | 2 | 0.000481193 |
| Aquilegia oxysepala | CHR01 | 6 | CH_aox_472 | 2 | 2 | 0.000481193 |
| Brassica carinata | ChrC01 | 6 | CH_bca_243 | 5 | 13 | 0.000000000197754 |
| Brassica carinata | ChrB01 | 6 | CH_bca_435 | 4 | 7 | 0.000000020987 |
| Brassica carinata | ChrB08 | 6 | CH_bca_855 | 3 | 3 | 0.00000224548 |
| Brassica napus | C03 | 6 | CH_bna_204 | 5 | 11 | 0.0000000000827244 |
| Brassica napus | C09 | 6 | CH_bna_895 | 3 | 5 | 0.0000256228 |
| Brassica oleracea | C3 | 6 | CH_bol_264 | 4 | 14 | 0.00000019054 |
| Beta vulgaris | Chr6_EL10_PGA_scaffold0 | 6 | CH_bvu_126 | 4 | 6 | 0.00000000536091 |
| Beta vulgaris | Chr7_EL10_PGA_scaffold5 | 6 | CH_bvu_264 | 3 | 3 | 0.00000493415 |
| Camellia sinensis var. sinensis | Chr6 | 6 | CH_camsi_1415 | 2 | 2 | 0.000687821 |
| Camellia sinensis var. sinensis | Chr11 | 6 | CH_camsi_1416 | 2 | 2 | 0.000687821 |
| Cannabis sativa | NC_044375.1 | 6 | CH_cansat_248 | 3 | 5 | 0.000000646683 |
| Coffea canephora | chr1 | 6 | CH_ccan_62 | 4 | 28 | 0.0000000000233684 |
| Citrus clementina | scaffold_8 | 6 | CH_ccl_316 | 3 | 3 | 0.000000201881 |
| Ceratophyllum demersum | 4 | 6 | CH_cde_495 | 2 | 2 | 0.000789796 |
| Ceratophyllum demersum | 5 | 6 | CH_cde_80 | 3 | 3 | 0.0000000935703 |
| Cucumis melo | chr12 | 6 | CH_cme_406 | 2 | 2 | 0.000400267 |
| Corchorus olitorius | AWUE01018461.1 | 6 | CH_col_201 | 2 | 2 | 0.000876296 |
| Carica papaya | supercontig_65 | 6 | CH_cpa_648 | 2 | 2 | 0.000950661 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2088 | 6 | CH_cqu_465 | 3 | 3 | 0.00000229002 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3429 | 6 | CH_cqu_466 | 3 | 3 | 0.00000229002 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2493 | 6 | CH_cqu_539 | 3 | 4 | 0.00000915759 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2716 | 6 | CH_cqu_540 | 3 | 4 | 0.00000915759 |
| Daucus carota | DCARv2_Chr2 | 6 | CH_dca_7 | 12 | 22 | 3.15308e-30 |
| Davidia involucrata | GWHABJS00000010 | 6 | CH_din_796 | 2 | 2 | 0.000750188 |
| Erigeron canadensis | Conyza_canadensis_scaffold:9 | 6 | CH_eca_110 | 4 | 5 | 0.0000000000474338 |
| Erythranthe guttata | scaffold_4 | 6 | CH_egut_136 | 5 | 7 | 0.00000000000569622 |
| Erythranthe guttata | scaffold_2 | 6 | CH_egut_440 | 3 | 5 | 0.0000227322 |
| Fragaria x ananassa | Fvb4-3 | 6 | CH_fan_490 | 4 | 39 | 0.00000212715 |
| Fragaria vesca | Fvb4 | 6 | CH_fve_826 | 2 | 2 | 0.000883652 |
| Glycine max | Gm12 | 6 | CH_gma_933 | 2 | 2 | 0.00079707 |
| Helianthus annuus | HanXRQChr11 | 6 | CH_han_162 | 5 | 7 | 0.000000000000451916 |
| Helianthus annuus | HanXRQChr01 | 6 | CH_han_332 | 4 | 7 | 0.00000000433034 |
| Lotus japonicus | chr3 | 6 | CH_lja_518 | 2 | 2 | 0.000429046 |
| Lonicera japonica | GWHAAZE00000001 | 6 | CH_lonja_125 | 6 | 7 | 1.01934e-17 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 6 | CH_lsa_38 | 8 | 11 | 6.34171e-23 |
| Magnolia biondii | Chr18 | 6 | CH_mbi_1010 | 2 | 2 | 0.000291397 |
| Micromonas commoda | Chr_01 | 6 | CH_mco_5 | 3 | 9 | 0.0000493092 |
| Malus domestica | Chr11 | 6 | CH_mdo_461 | 3 | 3 | 0.000000120796 |
| Manihot esculenta | Chromosome11 | 6 | CH_mes_321 | 3 | 4 | 0.000000447414 |
| Marchantia polymorpha | scaffold_20 | 6 | CH_mpo_4 | 9 | 14 | 4.49259e-23 |
| Medicago truncatula | chr4 | 6 | CH_mtr_1239 | 2 | 3 | 0.000369764 |
| Olea europaea | chr8 | 6 | CH_oeu_608 | 2 | 2 | 0.000533789 |
| Oryza sativa ssp. japonica | chr02 | 6 | CH_osa_630 | 2 | 2 | 0.000316874 |
| Petunia axillaris | Peaxi162Scf00115 | 6 | CH_pax_27 | 6 | 6 | 1.79255e-17 |
| Prunus persica | Pp06 | 6 | CH_ppe_747 | 2 | 2 | 0.000447577 |
| Populus trichocarpa | Chr09 | 6 | CH_ptr_786 | 2 | 2 | 0.000867002 |
| Salvia bowleyana | GWHASIU00000006 | 6 | CH_sbo_310 | 3 | 3 | 0.000000173889 |
| Salix brachista | GWHAAZH00000015 | 6 | CH_sbr_588 | 2 | 2 | 0.000378084 |
| Sechium edule | LG01 | 6 | CH_sed_386 | 2 | 2 | 0.000214026 |
| Sequoiadendron giganteum | chr6 | 6 | CH_sgi_1347 | 3 | 4 | 0.00000234909 |
| Solanum lycopersicum | SL4.0ch11 | 6 | CH_sly_301 | 3 | 3 | 0.000000103353 |
| Solanum pennellii | Spenn-ch11 | 6 | CH_spe_294 | 3 | 3 | 0.000000166188 |
| Solanum pennellii | Spenn-ch06 | 6 | CH_spe_295 | 3 | 3 | 0.000000166188 |
| Solanum tuberosum | ST4.03ch11 | 6 | CH_stu_453 | 3 | 5 | 0.00000330801 |
| Theobroma cacao | Chromosome_9 | 6 | CH_tca_328 | 3 | 3 | 0.000000281615 |
| Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_677 | 2 | 2 | 0.000557543 |
Available child term results
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |