Functional clusters
Information
- Type InterPro
- Description Protein spinster-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aquilegia oxysepala | CHR06 | 5 | CH_aox_546 | 2 | 2 | 0.000801989 |
| Camellia sinensis var. sinensis | Chr1 | 5 | CH_camsi_164 | 5 | 7 | 0.000000000000175459 |
| Citrus clementina | scaffold_7 | 5 | CH_ccl_332 | 3 | 3 | 0.000000353292 |
| Erigeron canadensis | Conyza_canadensis_scaffold:5 | 5 | CH_eca_34 | 6 | 7 | 1.3239e-17 |
| Eucalyptus grandis | Chr08 | 5 | CH_egr_729 | 3 | 3 | 0.000000179842 |
| Glycine max | Gm08 | 5 | CH_gma_932 | 2 | 2 | 0.00079707 |
| Helianthus annuus | HanXRQChr09 | 5 | CH_han_1118 | 2 | 2 | 0.000579643 |
| Helianthus annuus | HanXRQChr05 | 5 | CH_han_1119 | 2 | 2 | 0.000579643 |
| Magnolia biondii | Chr02 | 5 | CH_mbi_1009 | 2 | 2 | 0.000291397 |
| Medicago truncatula | chr8 | 5 | CH_mtr_661 | 3 | 4 | 0.000000850717 |
| Oryza sativa ssp. japonica | chr09 | 5 | CH_osa_266 | 3 | 3 | 0.000000146433 |
| Petunia axillaris | Peaxi162Scf00295 | 5 | CH_pax_230 | 3 | 3 | 0.000000415808 |
| Pisum sativum | chr7LG7 | 5 | CH_psa_503 | 3 | 18 | 0.00011639 |
| Papaver somniferum | NW_020624377.1 | 5 | CH_pso_580 | 3 | 4 | 0.00000110844 |
| Quercus lobata | 6 | 5 | CH_qlo_547 | 4 | 6 | 0.000000000433439 |
| Striga asiatica | scaffold47 | 5 | CH_sas_51 | 3 | 5 | 0.000000234635 |
| Salix brachista | GWHAAZH00000007 | 5 | CH_sbr_645 | 2 | 2 | 0.00063014 |
| Solanum tuberosum | ST4.03ch05 | 5 | CH_stu_116 | 5 | 5 | 0.000000000000013036 |
| Trifolium pratense | Tp57577_TGAC_v2_LG3 | 5 | CH_tpr_227 | 3 | 3 | 0.000000171909 |
| Vaccinium macrocarpon | chr3_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_676 | 2 | 2 | 0.000557543 |
| Zea mays | 7 | 5 | CH_zma_67 | 4 | 4 | 0.0000000000140373 |
| Aquilegia oxysepala | CHR06 | 6 | CH_aox_546 | 2 | 2 | 0.000801989 |
| Camellia sinensis var. sinensis | Chr1 | 6 | CH_camsi_164 | 5 | 7 | 0.000000000000175459 |
| Citrus clementina | scaffold_7 | 6 | CH_ccl_332 | 3 | 3 | 0.000000353292 |
| Erigeron canadensis | Conyza_canadensis_scaffold:5 | 6 | CH_eca_34 | 6 | 7 | 1.3239e-17 |
| Eucalyptus grandis | Chr08 | 6 | CH_egr_729 | 3 | 3 | 0.000000179842 |
| Glycine max | Gm08 | 6 | CH_gma_932 | 2 | 2 | 0.00079707 |
| Helianthus annuus | HanXRQChr09 | 6 | CH_han_1118 | 2 | 2 | 0.000579643 |
| Helianthus annuus | HanXRQChr05 | 6 | CH_han_1119 | 2 | 2 | 0.000579643 |
| Magnolia biondii | Chr02 | 6 | CH_mbi_1009 | 2 | 2 | 0.000291397 |
| Medicago truncatula | chr8 | 6 | CH_mtr_661 | 3 | 4 | 0.000000850717 |
| Oryza sativa ssp. japonica | chr09 | 6 | CH_osa_266 | 3 | 3 | 0.000000146433 |
| Petunia axillaris | Peaxi162Scf00295 | 6 | CH_pax_230 | 3 | 3 | 0.000000415808 |
| Pisum sativum | chr7LG7 | 6 | CH_psa_503 | 3 | 18 | 0.00011639 |
| Papaver somniferum | NW_020624377.1 | 6 | CH_pso_580 | 3 | 4 | 0.00000110844 |
| Quercus lobata | 6 | 6 | CH_qlo_547 | 4 | 6 | 0.000000000433439 |
| Striga asiatica | scaffold47 | 6 | CH_sas_51 | 3 | 5 | 0.000000234635 |
| Salix brachista | GWHAAZH00000007 | 6 | CH_sbr_645 | 2 | 2 | 0.00063014 |
| Solanum tuberosum | ST4.03ch05 | 6 | CH_stu_116 | 5 | 5 | 0.000000000000013036 |
| Trifolium pratense | Tp57577_TGAC_v2_LG3 | 6 | CH_tpr_227 | 3 | 3 | 0.000000171909 |
| Vaccinium macrocarpon | chr3_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_676 | 2 | 2 | 0.000557543 |
| Zea mays | 7 | 6 | CH_zma_67 | 4 | 4 | 0.0000000000140373 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |