Functional clusters

Information

  • Type InterPro
  • Description Tetracycline resistance protein TetA/multidrug resistance protein MdtG

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_6 5 CH_aly_591 2 2 0.000396027
Arabidopsis thaliana Chr5 5 CH_ath_460 2 2 0.000171895
Brassica carinata ChrC04 5 CH_bca_1875 2 2 0.00059854
Brassica oleracea C9 5 CH_bol_584 3 15 0.0000873949
Cardamine hirsuta Chr6 5 CH_chi_470 2 2 0.0000691204
Capsella rubella scaffold_6 5 CH_cru_579 2 2 0.000438693
Eutrema salsugineum scaffold_2 5 CH_esa_326 2 2 0.0000761499
Fragaria vesca Fvb2 5 CH_fve_626 2 2 0.00017673
Glycine max Gm13 5 CH_gma_134 4 4 0.0000000000114835
Lotus japonicus chr3 5 CH_lja_309 3 6 0.00000536691
Lonicera japonica GWHAAZE00000009 5 CH_lonja_714 2 2 0.0000598874
Malus domestica Chr02 5 CH_mdo_1080 2 2 0.000227527
Schrenkiella parvula ch6-6 5 CH_spa_279 2 2 0.000236202
Theobroma cacao Chromosome_9 5 CH_tca_598 2 2 0.000219716
Vanilla planifolia CM028161.1 5 CH_vpl_590 2 4 0.000443295
Arabidopsis lyrata scaffold_6 6 CH_aly_591 2 2 0.000396027
Arabidopsis thaliana Chr5 6 CH_ath_460 2 2 0.000171895
Brassica carinata ChrC04 6 CH_bca_1875 2 2 0.00059854
Brassica oleracea C9 6 CH_bol_584 3 15 0.0000873949
Cardamine hirsuta Chr6 6 CH_chi_470 2 2 0.0000691204
Capsella rubella scaffold_6 6 CH_cru_579 2 2 0.000438693
Eutrema salsugineum scaffold_2 6 CH_esa_326 2 2 0.0000761499
Fragaria vesca Fvb2 6 CH_fve_626 2 2 0.00017673
Glycine max Gm13 6 CH_gma_134 4 4 0.0000000000114835
Lotus japonicus chr3 6 CH_lja_309 3 6 0.00000536691
Lonicera japonica GWHAAZE00000009 6 CH_lonja_714 2 2 0.0000598874
Malus domestica Chr02 6 CH_mdo_1080 2 2 0.000227527
Schrenkiella parvula ch6-6 6 CH_spa_279 2 2 0.000236202
Theobroma cacao Chromosome_9 6 CH_tca_598 2 2 0.000219716
Vanilla planifolia CM028161.1 6 CH_vpl_590 2 4 0.000443295

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001