Functional clusters

Information

  • Type InterPro
  • Description Major facilitator, sugar transporter-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr2 5 CH_acertr_142 5 5 0.000000000531704
Acer truncatum chr1 5 CH_acertr_375 4 5 0.00000153689
Actinidia chinensis Lachesis_group22 5 CH_ach_486 3 3 0.000377653
Amaranthus hybridus AmaHy_arrow1_Scaffold_4 5 CH_amhyb_108 5 9 0.00000014902
Aquilegia oxysepala CHR05 5 CH_aox_460 3 3 0.000401982
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.11 5 CH_arhy_318 8 17 0.000000000089476
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.10 5 CH_arhy_640 5 7 0.00000134336
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 5 CH_arhy_924 4 5 0.0000818272
Amborella trichopoda AmTr_v1.0_scaffold00019 5 CH_atr_150 5 6 0.00000000895816
Amborella trichopoda AmTr_v1.0_scaffold00003 5 CH_atr_255 4 5 0.000000684596
Amborella trichopoda AmTr_v1.0_scaffold00059 5 CH_atr_311 4 6 0.0000102323
Amborella trichopoda AmTr_v1.0_scaffold00103 5 CH_atr_348 4 8 0.00004758
Brassica carinata ChrB01 5 CH_bca_1146 4 5 0.0000217717
Brassica carinata ChrC04 5 CH_bca_198 7 11 0.0000000000243921
Brassica carinata ChrC08 5 CH_bca_400 5 5 0.0000000112865
Brassica carinata ChrC08 5 CH_bca_401 5 5 0.0000000112865
Brassica carinata ChrB04 5 CH_bca_402 5 5 0.0000000112865
Brassica napus A01 5 CH_bna_165 7 10 0.00000000000796885
Brassica napus C09 5 CH_bna_180 7 11 0.0000000000218668
Brassica napus A02 5 CH_bna_421 5 6 0.0000000649283
Brassica napus C06 5 CH_bna_721 4 4 0.00000434347
Brassica napus C01 5 CH_bna_81 8 9 0.00000000000000148192
Brassica oleracea C2 5 CH_bol_296 5 9 0.000000446482
Brassica oleracea C1 5 CH_bol_52 7 7 0.0000000000000172516
Brassica oleracea C9 5 CH_bol_69 8 16 0.000000000000475236
Brassica oleracea C4 5 CH_bol_866 3 3 0.000717293
Brassica rapa A02 5 CH_bra_146 5 6 0.0000000659295
Brassica rapa A07 5 CH_bra_147 5 6 0.0000000659295
Brassica rapa A01 5 CH_bra_22 8 9 0.000000000000002407
Brassica rapa A09 5 CH_bra_220 5 9 0.00000137435
Beta vulgaris Chr4_EL10_PGA_scaffold1 5 CH_bvu_535 3 3 0.00084478
Beta vulgaris Chr4_EL10_PGA_scaffold1 5 CH_bvu_85 6 6 0.0000000000263113
Camellia sinensis var. sinensis Chr1 5 CH_camsi_114 8 10 0.00000000000000331248
Camellia sinensis var. sinensis Chr6 5 CH_camsi_678 4 4 0.00000193026
Cannabis sativa NC_044377.1 5 CH_cansat_491 4 12 0.000299051
Capsicum annuum PGAv.1.6.scaffold809 5 CH_can_223 5 6 0.00000000443457
Capsicum annuum PGAv.1.6.scaffold162 5 CH_can_633 3 3 0.000200648
Corylus avellana 3 5 CH_cav_574 4 10 0.000127906
Citrus clementina scaffold_1 5 CH_ccl_156 6 6 0.0000000000198232
Citrus clementina scaffold_9 5 CH_ccl_16 16 17 7.61931e-36
Ceratophyllum demersum 1 5 CH_cde_472 3 4 0.000606082
Carpinus fangiana Cfa02 5 CH_cfa_524 3 3 0.0003254
Cardamine hirsuta Chr8 5 CH_chi_327 4 4 0.00000101932
Carya illinoinensis Chr16 5 CH_cil_478 4 5 0.00000623586
Corchorus olitorius AWUE01022440.1 5 CH_col_113 3 3 0.0000582405
Carica papaya supercontig_34 5 CH_cpa_432 3 3 0.000192374
Chenopodium quinoa C_Quinoa_Scaffold_2933 5 CH_cqu_110 7 7 0.0000000000000941697
Chenopodium quinoa C_Quinoa_Scaffold_2751 5 CH_cqu_154 6 6 0.0000000000320519
Chenopodium quinoa C_Quinoa_Scaffold_2088 5 CH_cqu_351 5 7 0.000000226136
Chenopodium quinoa C_Quinoa_Scaffold_3820 5 CH_cqu_352 5 7 0.000000226136
Chenopodium quinoa C_Quinoa_Scaffold_4480 5 CH_cqu_87 8 9 0.00000000000000246364
Chlamydomonas reinhardtii chromosome_16 5 CH_cre_75 3 4 0.000017068
Capsella rubella scaffold_6 5 CH_cru_294 4 4 0.00000095505
Daucus carota DCARv2_Chr6 5 CH_dca_107 6 8 0.000000000122725
Davidia involucrata GWHABJS00000002 5 CH_din_256 5 9 0.000000150529
Durio zibethinus NW_019168481.1 5 CH_dzi_245 4 4 0.000000834679
Eucalyptus grandis Chr05 5 CH_egr_1024 4 5 0.0000408761
Eucalyptus grandis Chr11 5 CH_egr_357 7 7 0.000000000000462153
Eucalyptus grandis Chr06 5 CH_egr_661 5 5 0.0000000316809
Eucalyptus grandis Chr08 5 CH_egr_717 8 40 0.000000120498
Eucalyptus grandis Chr04 5 CH_egr_937 4 4 0.0000082008
Gossypium hirsutum D11 5 CH_ghi_145 8 9 8.72567e-16
Gossypium hirsutum A11 5 CH_ghi_155 8 10 0.00000000000000435351
Glycine max Gm19 5 CH_gma_603 4 7 0.0000874699
Gossypium raimondii Chr07 5 CH_gra_63 9 11 6.22916e-18
Gossypium raimondii Chr08 5 CH_gra_644 3 3 0.000596745
Helianthus annuus HanXRQChr08 5 CH_han_373 5 7 0.0000000137229
Lupinus albus Lalb_Chr02 5 CH_lal_248 4 4 0.000000878165
Lupinus albus Lalb_Chr14 5 CH_lal_657 3 3 0.000408089
Lonicera japonica GWHAAZE00000003 5 CH_lonja_283 6 7 0.000000000144318
Lonicera japonica GWHAAZE00000004 5 CH_lonja_482 5 8 0.000000403888
Lactuca sativa Lsat_1_v8_lg_8 5 CH_lsa_734 3 3 0.000236362
Magnolia biondii Chr07 5 CH_mbi_1181 3 4 0.000677161
Magnolia biondii Chr18 5 CH_mbi_586 5 18 0.00000339612
Malus domestica Chr16 5 CH_mdo_182 7 11 0.0000000000111843
Malus domestica Chr02 5 CH_mdo_577 7 43 0.00000101917
Malus domestica Chr05 5 CH_mdo_671 5 12 0.0000043574
Medicago truncatula chr7 5 CH_mtr_1318 3 3 0.000592875
Nicotiana tabacum Nitab4.5_0000161 5 CH_nta_156 5 13 0.000020498
Nicotiana tabacum Nitab4.5_0000232 5 CH_nta_182 6 34 0.0000749339
Oryza sativa ssp. japonica chr04 5 CH_osa_129 7 14 0.0000000000216609
Oryza sativa ssp. japonica chr02 5 CH_osa_417 4 6 0.0000168761
Petunia axillaris Peaxi162Scf00006 5 CH_pax_582 3 3 0.000254088
Prunus persica Pp04 5 CH_ppe_231 6 8 0.000000000507236
Pisum sativum chr4LG4 5 CH_psa_176 6 13 0.0000000175173
Pisum sativum chr5LG3 5 CH_psa_711 3 3 0.000660003
Papaver somniferum NC_039358.1 5 CH_pso_1061 4 11 0.000273108
Papaver somniferum NC_039367.1 5 CH_pso_57 13 50 2.96188e-20
Papaver somniferum NW_020624820.1 5 CH_pso_932 4 9 0.000104568
Populus trichocarpa Chr08 5 CH_ptr_469 4 5 0.0000104409
Quercus lobata 3 5 CH_qlo_37 19 30 5.91413e-36
Quercus lobata CM012294 5 CH_qlo_426 7 9 0.00000000000596056
Rosa chinensis RcHm_v2.0_Chr6 5 CH_rch_560 5 8 0.0000000836271
Salvia bowleyana GWHASIU00000002 5 CH_sbo_501 4 9 0.0000478572
Simmondsia chinensis GWHAASQ00000005 5 CH_sci_26 9 10 2.48352e-17
Sequoiadendron giganteum chr8 5 CH_sgi_378 8 14 0.0000000000000293555
Sequoiadendron giganteum chr6 5 CH_sgi_583 6 7 0.0000000000188717
Sequoiadendron giganteum chr6 5 CH_sgi_869 5 6 0.00000000830059
Solanum lycopersicum SL4.0ch10 5 CH_sly_358 4 4 0.000000589447
Solanum lycopersicum SL4.0ch02 5 CH_sly_425 4 5 0.00000294251
Solanum tuberosum ST4.03ch09 5 CH_stu_825 3 3 0.000447353
Trochodendron aralioides group0 5 CH_tar_243 7 35 0.0000000816224
Theobroma cacao Chromosome_3 5 CH_tca_285 5 7 0.0000000587707
Trifolium pratense Tp57577_TGAC_v2_LG2 5 CH_tpr_791 3 3 0.00081901
Trifolium pratense Tp57577_TGAC_v2_LG4 5 CH_tpr_792 3 3 0.00081901
Trifolium pratense Tp57577_TGAC_v2_LG5 5 CH_tpr_86 6 6 0.0000000000227401
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_11 11 12 7.98573e-23
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_298 4 4 0.00000262038
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_747 3 3 0.000805616
Zea mays 2 5 CH_zma_255 4 5 0.00000584421
Zea mays 2 5 CH_zma_256 4 5 0.00000584421
Zea mays 7 5 CH_zma_257 4 5 0.00000584421
Acer truncatum chr2 6 CH_acertr_142 5 5 0.000000000531704
Acer truncatum chr1 6 CH_acertr_375 4 5 0.00000153689
Actinidia chinensis Lachesis_group22 6 CH_ach_486 3 3 0.000377653
Amaranthus hybridus AmaHy_arrow1_Scaffold_4 6 CH_amhyb_108 5 9 0.00000014902
Aquilegia oxysepala CHR05 6 CH_aox_460 3 3 0.000401982
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.11 6 CH_arhy_318 8 17 0.000000000089476
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.10 6 CH_arhy_640 5 7 0.00000134336
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 6 CH_arhy_924 4 5 0.0000818272
Amborella trichopoda AmTr_v1.0_scaffold00019 6 CH_atr_150 5 6 0.00000000895816
Amborella trichopoda AmTr_v1.0_scaffold00003 6 CH_atr_255 4 5 0.000000684596
Amborella trichopoda AmTr_v1.0_scaffold00059 6 CH_atr_311 4 6 0.0000102323
Amborella trichopoda AmTr_v1.0_scaffold00103 6 CH_atr_348 4 8 0.00004758
Brassica carinata ChrB01 6 CH_bca_1146 4 5 0.0000217717
Brassica carinata ChrC04 6 CH_bca_198 7 11 0.0000000000243921
Brassica carinata ChrC08 6 CH_bca_400 5 5 0.0000000112865
Brassica carinata ChrC08 6 CH_bca_401 5 5 0.0000000112865
Brassica carinata ChrB04 6 CH_bca_402 5 5 0.0000000112865
Brassica napus A01 6 CH_bna_165 7 10 0.00000000000796885
Brassica napus C09 6 CH_bna_180 7 11 0.0000000000218668
Brassica napus A02 6 CH_bna_421 5 6 0.0000000649283
Brassica napus C06 6 CH_bna_721 4 4 0.00000434347
Brassica napus C01 6 CH_bna_81 8 9 0.00000000000000148192
Brassica oleracea C2 6 CH_bol_296 5 9 0.000000446482
Brassica oleracea C1 6 CH_bol_52 7 7 0.0000000000000172516
Brassica oleracea C9 6 CH_bol_69 8 16 0.000000000000475236
Brassica oleracea C4 6 CH_bol_866 3 3 0.000717293
Brassica rapa A02 6 CH_bra_146 5 6 0.0000000659295
Brassica rapa A07 6 CH_bra_147 5 6 0.0000000659295
Brassica rapa A01 6 CH_bra_22 8 9 0.000000000000002407
Brassica rapa A09 6 CH_bra_220 5 9 0.00000137435
Beta vulgaris Chr4_EL10_PGA_scaffold1 6 CH_bvu_535 3 3 0.00084478
Beta vulgaris Chr4_EL10_PGA_scaffold1 6 CH_bvu_85 6 6 0.0000000000263113
Camellia sinensis var. sinensis Chr1 6 CH_camsi_114 8 10 0.00000000000000331248
Camellia sinensis var. sinensis Chr6 6 CH_camsi_678 4 4 0.00000193026
Cannabis sativa NC_044377.1 6 CH_cansat_491 4 12 0.000299051
Capsicum annuum PGAv.1.6.scaffold809 6 CH_can_223 5 6 0.00000000443457
Capsicum annuum PGAv.1.6.scaffold162 6 CH_can_633 3 3 0.000200648
Corylus avellana 3 6 CH_cav_574 4 10 0.000127906
Citrus clementina scaffold_1 6 CH_ccl_156 6 6 0.0000000000198232
Citrus clementina scaffold_9 6 CH_ccl_16 16 17 7.61931e-36
Ceratophyllum demersum 1 6 CH_cde_472 3 4 0.000606082
Carpinus fangiana Cfa02 6 CH_cfa_524 3 3 0.0003254
Cardamine hirsuta Chr8 6 CH_chi_327 4 4 0.00000101932
Carya illinoinensis Chr16 6 CH_cil_478 4 5 0.00000623586
Corchorus olitorius AWUE01022440.1 6 CH_col_113 3 3 0.0000582405
Carica papaya supercontig_34 6 CH_cpa_432 3 3 0.000192374
Chenopodium quinoa C_Quinoa_Scaffold_2933 6 CH_cqu_110 7 7 0.0000000000000941697
Chenopodium quinoa C_Quinoa_Scaffold_2751 6 CH_cqu_154 6 6 0.0000000000320519
Chenopodium quinoa C_Quinoa_Scaffold_2088 6 CH_cqu_351 5 7 0.000000226136
Chenopodium quinoa C_Quinoa_Scaffold_3820 6 CH_cqu_352 5 7 0.000000226136
Chenopodium quinoa C_Quinoa_Scaffold_4480 6 CH_cqu_87 8 9 0.00000000000000246364
Chlamydomonas reinhardtii chromosome_16 6 CH_cre_75 3 4 0.000017068
Capsella rubella scaffold_6 6 CH_cru_294 4 4 0.00000095505
Daucus carota DCARv2_Chr6 6 CH_dca_107 6 8 0.000000000122725
Davidia involucrata GWHABJS00000002 6 CH_din_256 5 9 0.000000150529
Durio zibethinus NW_019168481.1 6 CH_dzi_245 4 4 0.000000834679
Eucalyptus grandis Chr05 6 CH_egr_1024 4 5 0.0000408761
Eucalyptus grandis Chr11 6 CH_egr_357 7 7 0.000000000000462153
Eucalyptus grandis Chr06 6 CH_egr_661 5 5 0.0000000316809
Eucalyptus grandis Chr08 6 CH_egr_717 8 40 0.000000120498
Eucalyptus grandis Chr04 6 CH_egr_937 4 4 0.0000082008
Fragaria x ananassa Fvb4-3 6 CH_fan_1261 3 3 0.000838859
Gossypium hirsutum D11 6 CH_ghi_145 8 9 8.72567e-16
Gossypium hirsutum A11 6 CH_ghi_155 8 10 0.00000000000000435351
Glycine max Gm19 6 CH_gma_603 4 7 0.0000874699
Gossypium raimondii Chr07 6 CH_gra_63 9 11 6.22916e-18
Gossypium raimondii Chr08 6 CH_gra_644 3 3 0.000596745
Helianthus annuus HanXRQChr08 6 CH_han_373 5 7 0.0000000137229
Lupinus albus Lalb_Chr02 6 CH_lal_248 4 4 0.000000878165
Lupinus albus Lalb_Chr14 6 CH_lal_657 3 3 0.000408089
Lonicera japonica GWHAAZE00000003 6 CH_lonja_283 6 7 0.000000000144318
Lonicera japonica GWHAAZE00000004 6 CH_lonja_482 5 8 0.000000403888
Lactuca sativa Lsat_1_v8_lg_8 6 CH_lsa_734 3 3 0.000236362
Magnolia biondii Chr07 6 CH_mbi_1181 3 4 0.000677161
Magnolia biondii Chr18 6 CH_mbi_586 5 18 0.00000339612
Malus domestica Chr16 6 CH_mdo_182 7 11 0.0000000000111843
Malus domestica Chr02 6 CH_mdo_577 7 43 0.00000101917
Malus domestica Chr05 6 CH_mdo_671 5 12 0.0000043574
Medicago truncatula chr7 6 CH_mtr_1318 3 3 0.000592875
Nicotiana tabacum Nitab4.5_0000161 6 CH_nta_156 5 13 0.000020498
Nicotiana tabacum Nitab4.5_0000232 6 CH_nta_182 6 34 0.0000749339
Oryza sativa ssp. japonica chr04 6 CH_osa_129 7 14 0.0000000000216609
Oryza sativa ssp. japonica chr02 6 CH_osa_417 4 6 0.0000168761
Petunia axillaris Peaxi162Scf00006 6 CH_pax_582 3 3 0.000254088
Prunus persica Pp04 6 CH_ppe_231 6 8 0.000000000507236
Pisum sativum chr4LG4 6 CH_psa_176 6 13 0.0000000175173
Pisum sativum chr5LG3 6 CH_psa_711 3 3 0.000660003
Papaver somniferum NC_039358.1 6 CH_pso_1061 4 11 0.000273108
Papaver somniferum NC_039367.1 6 CH_pso_57 13 50 2.96188e-20
Papaver somniferum NW_020624820.1 6 CH_pso_932 4 9 0.000104568
Populus trichocarpa Chr08 6 CH_ptr_469 4 5 0.0000104409
Quercus lobata 3 6 CH_qlo_37 19 30 5.91413e-36
Quercus lobata CM012294 6 CH_qlo_426 7 9 0.00000000000596056
Rosa chinensis RcHm_v2.0_Chr6 6 CH_rch_560 5 8 0.0000000836271
Salvia bowleyana GWHASIU00000002 6 CH_sbo_501 4 9 0.0000478572
Simmondsia chinensis GWHAASQ00000005 6 CH_sci_26 9 10 2.48352e-17
Sequoiadendron giganteum chr8 6 CH_sgi_378 8 14 0.0000000000000293555
Sequoiadendron giganteum chr6 6 CH_sgi_583 6 7 0.0000000000188717
Sequoiadendron giganteum chr6 6 CH_sgi_869 5 6 0.00000000830059
Solanum lycopersicum SL4.0ch10 6 CH_sly_358 4 4 0.000000589447
Solanum lycopersicum SL4.0ch02 6 CH_sly_425 4 5 0.00000294251
Solanum tuberosum ST4.03ch09 6 CH_stu_825 3 3 0.000447353
Trochodendron aralioides group0 6 CH_tar_243 7 35 0.0000000816224
Theobroma cacao Chromosome_3 6 CH_tca_285 5 7 0.0000000587707
Trifolium pratense Tp57577_TGAC_v2_LG2 6 CH_tpr_791 3 3 0.00081901
Trifolium pratense Tp57577_TGAC_v2_LG4 6 CH_tpr_792 3 3 0.00081901
Trifolium pratense Tp57577_TGAC_v2_LG5 6 CH_tpr_86 6 6 0.0000000000227401
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_11 11 12 7.98573e-23
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_298 4 4 0.00000262038
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_747 3 3 0.000805616
Zea mays 2 6 CH_zma_255 4 5 0.00000584421
Zea mays 2 6 CH_zma_256 4 5 0.00000584421
Zea mays 7 6 CH_zma_257 4 5 0.00000584421

Available child term results

Ontology identifier Description Number of clusters
IPR003663 Sugar/inositol transporter 131
IPR004738 Phosphate permease 104
IPR044775 Sugar transporter ERD6/Tret1-like 128
IPR044776 Polyol transporter 1-6 36
IPR044778 Sugar transport protein STP/MST-like, plant 121

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001