Functional clusters

Information

  • Type InterPro
  • Description Phosphate permease

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-5 5 CH_aar_74 4 4 0.000000000034176
Acer truncatum chr4 5 CH_acertr_858 2 2 0.000422982
Arabidopsis thaliana Chr5 5 CH_ath_154 4 15 0.00000000336857
Brassica carinata ChrB07 5 CH_bca_178 5 6 0.00000000000703963
Brassica carinata ChrC06 5 CH_bca_346 4 4 0.00000000296771
Brassica carinata ChrB07 5 CH_bca_58 7 11 5.56811e-17
Brassica napus A09 5 CH_bna_114 6 12 0.0000000000000742531
Brassica napus A05 5 CH_bna_688 3 3 0.0000033825
Brassica napus A06 5 CH_bna_689 3 3 0.0000033825
Brassica rapa A05 5 CH_bra_229 3 3 0.00000188
Brassica rapa A06 5 CH_bra_230 3 3 0.00000188
Beta vulgaris Chr3_EL10_PGA_scaffold7 5 CH_bvu_31 6 6 4.04519e-17
Camellia sinensis var. sinensis Chr13 5 CH_camsi_1196 2 2 0.000275128
Cannabis sativa NC_044376.1 5 CH_cansat_97 4 4 0.0000000000297316
Capsicum annuum PGAv.1.6.scaffold793 5 CH_can_768 2 2 0.000495663
Corylus avellana 9 5 CH_cav_84 5 7 0.000000000000304749
Citrus clementina scaffold_9 5 CH_ccl_764 2 2 0.000820311
Ceratophyllum demersum 4 5 CH_cde_101 3 5 0.00000037423
Cardamine hirsuta Chr6 5 CH_chi_156 4 6 0.000000000520048
Carya illinoinensis Chr01 5 CH_cil_402 3 3 0.000000950893
Carica papaya supercontig_44 5 CH_cpa_553 2 2 0.000570396
Capsella rubella scaffold_8 5 CH_cru_78 5 5 0.0000000000000270124
Davidia involucrata GWHABJS00000014 5 CH_din_725 2 2 0.000500125
Erigeron canadensis Conyza_canadensis_scaffold:5 5 CH_eca_260 3 3 0.000000105712
Erigeron canadensis Conyza_canadensis_scaffold:7 5 CH_eca_871 2 2 0.000942317
Eucalyptus grandis Chr08 5 CH_egr_340 5 5 0.00000000000011328
Eucalyptus grandis Chr08 5 CH_egr_371 5 6 0.000000000000679529
Erythranthe guttata scaffold_7 5 CH_egut_32 9 9 2.24481e-27
Eutrema salsugineum scaffold_17 5 CH_esa_13 8 9 6.95036e-24
Gossypium hirsutum A02 5 CH_ghi_530 3 3 0.000000486611
Gossypium hirsutum D02 5 CH_ghi_531 3 3 0.000000486611
Lonicera japonica GWHAAZE00000003 5 CH_lonja_190 5 7 0.000000000000113448
Lactuca sativa Lsat_1_v8_lg_3 5 CH_lsa_164 5 13 0.0000000000169637
Medicago truncatula chr1 5 CH_mtr_708 3 4 0.000001671
Nelumbo nucifera chr3 5 CH_nnu_436 2 2 0.000144505
Nicotiana tabacum Nitab4.5_0000044 5 CH_nta_304 2 2 0.000658364
Oryza sativa ssp. japonica chr03 5 CH_osa_368 3 6 0.00000501892
Papaver somniferum NW_020624376.1 5 CH_pso_255 5 13 0.0000000000835625
Papaver somniferum NC_039359.1 5 CH_pso_73 7 12 1.99812e-18
Populus trichocarpa Chr10 5 CH_ptr_204 4 5 0.000000000608222
Quercus lobata 6 5 CH_qlo_490 4 4 0.000000000052024
Rosa chinensis RcHm_v2.0_Chr4 5 CH_rch_754 3 5 0.00000200204
Rhododendron simsii chr04 5 CH_rsi_167 5 10 0.000000000000196623
Salvia bowleyana GWHASIU00000007 5 CH_sbo_298 3 3 0.000000108681
Solanum lycopersicum SL4.0ch09 5 CH_sly_931 2 2 0.000880411
Solanum pennellii Spenn-ch03 5 CH_spe_837 2 2 0.000667186
Solanum pennellii Spenn-ch09 5 CH_spe_838 2 2 0.000667186
Solanum tuberosum ST4.03ch03 5 CH_stu_850 2 2 0.000512453
Solanum tuberosum ST4.03ch09 5 CH_stu_851 2 2 0.000512453
Tarenaya hassleriana NW_010967707.1 5 CH_tha_62 4 5 0.000000000643984
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_58 5 7 0.0000000000000117455
Vigna mungo CM024071.1 5 CH_vmu_585 2 2 0.000646141
Aethionema arabicum LG-5 6 CH_aar_74 4 4 0.000000000034176
Acer truncatum chr4 6 CH_acertr_858 2 2 0.000422982
Arabidopsis thaliana Chr5 6 CH_ath_154 4 15 0.00000000336857
Brassica carinata ChrB07 6 CH_bca_178 5 6 0.00000000000703963
Brassica carinata ChrC06 6 CH_bca_346 4 4 0.00000000296771
Brassica carinata ChrB07 6 CH_bca_58 7 11 5.56811e-17
Brassica napus A09 6 CH_bna_114 6 12 0.0000000000000742531
Brassica napus A05 6 CH_bna_688 3 3 0.0000033825
Brassica napus A06 6 CH_bna_689 3 3 0.0000033825
Brassica rapa A05 6 CH_bra_229 3 3 0.00000188
Brassica rapa A06 6 CH_bra_230 3 3 0.00000188
Beta vulgaris Chr3_EL10_PGA_scaffold7 6 CH_bvu_31 6 6 4.04519e-17
Camellia sinensis var. sinensis Chr13 6 CH_camsi_1196 2 2 0.000275128
Cannabis sativa NC_044376.1 6 CH_cansat_97 4 4 0.0000000000297316
Capsicum annuum PGAv.1.6.scaffold793 6 CH_can_768 2 2 0.000495663
Corylus avellana 9 6 CH_cav_84 5 7 0.000000000000304749
Citrus clementina scaffold_9 6 CH_ccl_764 2 2 0.000820311
Ceratophyllum demersum 4 6 CH_cde_101 3 5 0.00000037423
Cardamine hirsuta Chr6 6 CH_chi_156 4 6 0.000000000520048
Carya illinoinensis Chr01 6 CH_cil_402 3 3 0.000000950893
Carica papaya supercontig_44 6 CH_cpa_553 2 2 0.000570396
Capsella rubella scaffold_8 6 CH_cru_78 5 5 0.0000000000000270124
Davidia involucrata GWHABJS00000014 6 CH_din_725 2 2 0.000500125
Erigeron canadensis Conyza_canadensis_scaffold:5 6 CH_eca_260 3 3 0.000000105712
Erigeron canadensis Conyza_canadensis_scaffold:7 6 CH_eca_871 2 2 0.000942317
Eucalyptus grandis Chr08 6 CH_egr_340 5 5 0.00000000000011328
Eucalyptus grandis Chr08 6 CH_egr_371 5 6 0.000000000000679529
Erythranthe guttata scaffold_7 6 CH_egut_32 9 9 2.24481e-27
Eutrema salsugineum scaffold_17 6 CH_esa_13 8 9 6.95036e-24
Gossypium hirsutum A02 6 CH_ghi_530 3 3 0.000000486611
Gossypium hirsutum D02 6 CH_ghi_531 3 3 0.000000486611
Lonicera japonica GWHAAZE00000003 6 CH_lonja_190 5 7 0.000000000000113448
Lactuca sativa Lsat_1_v8_lg_3 6 CH_lsa_164 5 13 0.0000000000169637
Medicago truncatula chr1 6 CH_mtr_708 3 4 0.000001671
Nelumbo nucifera chr3 6 CH_nnu_436 2 2 0.000144505
Nicotiana tabacum Nitab4.5_0000044 6 CH_nta_304 2 2 0.000658364
Oryza sativa ssp. japonica chr03 6 CH_osa_368 3 6 0.00000501892
Papaver somniferum NW_020624376.1 6 CH_pso_255 5 13 0.0000000000835625
Papaver somniferum NC_039359.1 6 CH_pso_73 7 12 1.99812e-18
Populus trichocarpa Chr10 6 CH_ptr_204 4 5 0.000000000608222
Quercus lobata 6 6 CH_qlo_490 4 4 0.000000000052024
Rosa chinensis RcHm_v2.0_Chr4 6 CH_rch_754 3 5 0.00000200204
Rhododendron simsii chr04 6 CH_rsi_167 5 10 0.000000000000196623
Salvia bowleyana GWHASIU00000007 6 CH_sbo_298 3 3 0.000000108681
Solanum lycopersicum SL4.0ch09 6 CH_sly_931 2 2 0.000880411
Solanum pennellii Spenn-ch03 6 CH_spe_837 2 2 0.000667186
Solanum pennellii Spenn-ch09 6 CH_spe_838 2 2 0.000667186
Solanum tuberosum ST4.03ch03 6 CH_stu_850 2 2 0.000512453
Solanum tuberosum ST4.03ch09 6 CH_stu_851 2 2 0.000512453
Tarenaya hassleriana NW_010967707.1 6 CH_tha_62 4 5 0.000000000643984
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_58 5 7 0.0000000000000117455
Vigna mungo CM024071.1 6 CH_vmu_585 2 2 0.000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001