Functional clusters

Information

Species	Chromosome	Experiment	Cluster id	Cluster size	Number of genes	E-value
Eucalyptus grandis	Chr09	3	CH_egr_660	8	63	0.0000457958
Quercus lobata	4	3	CH_qlo_802	7	41	0.00014485
Trochodendron aralioides	group1	3	CH_tar_299	6	33	0.0000880204
Eucalyptus grandis	Chr09	4	CH_egr_660	8	63	0.0000457958
Quercus lobata	4	4	CH_qlo_802	7	41	0.00014485
Trochodendron aralioides	group1	4	CH_tar_299	6	33	0.0000880204

Ontology identifier	Description	Number of clusters
GO:0002220	innate immune response activating cell surface receptor signaling pathway	16
GO:0002253	activation of immune response	8
GO:0002752	cell surface pattern recognition receptor signaling pathway	4
GO:0002758	innate immune response-activating signal transduction	30
GO:0009864	induced systemic resistance, jasmonic acid mediated signaling pathway	8
GO:0009866	induced systemic resistance, ethylene mediated signaling pathway	8
GO:0034052	positive regulation of plant-type hypersensitive response	2
GO:0140426	PAMP-triggered immunity signalling pathway	2
GO:1900367	positive regulation of defense response to insect	6
GO:1900426	positive regulation of defense response to bacterium	8
GO:1901672	positive regulation of systemic acquired resistance	8
GO:1902290	positive regulation of defense response to oomycetes	22

Exp id	Data type	Data filter	Min genes cluster	Max genes cluster	Max cluster size	E-value
1	MapMan	No filter applied.	2	30	80	0.001
2	MapMan	No filter applied.	2	30	80	0.001
3	GO	All GO data.	2	30	80	0.001
4	GO	All GO data.	2	30	80	0.001
5	InterPro	No filter applied.	2	30	80	0.001
6	InterPro	No filter applied.	2	30	80	0.001