Functional clusters

Information

  • Type Gene Ontology
  • Description activation of immune response

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Citrus clementina scaffold_7 3 CH_ccl_213 7 37 0.00000132342
Cucumis melo chr04 3 CH_cme_59 6 14 0.00000000286582
Cucumis sativus L. chr3 3 CH_csa_66 6 10 0.000000000769613
Hydrangea macrophylla Hma1.2p1_0090F.1 3 CH_hma_37 6 15 0.00000000720658
Citrus clementina scaffold_7 4 CH_ccl_213 7 37 0.00000132342
Cucumis melo chr04 4 CH_cme_59 6 14 0.00000000286582
Cucumis sativus L. chr3 4 CH_csa_66 6 10 0.000000000769613
Hydrangea macrophylla Hma1.2p1_0090F.1 4 CH_hma_37 6 15 0.00000000720658

Available child term results

Ontology identifier Description Number of clusters
GO:0002220 innate immune response activating cell surface receptor signaling pathway 16
GO:0002752 cell surface pattern recognition receptor signaling pathway 4
GO:0002758 innate immune response-activating signal transduction 30
GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway 8
GO:0009866 induced systemic resistance, ethylene mediated signaling pathway 8
GO:0140426 PAMP-triggered immunity signalling pathway 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001