Functional clusters

Information

  • Type Gene Ontology
  • Description ribosomal subunit

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana Chr2 3 CH_ath_363 4 4 0.0000363613
Amborella trichopoda AmTr_v1.0_scaffold00040 3 CH_atr_231 4 5 0.000151663
Camellia sinensis var. sinensis Chr11 3 CH_camsi_651 4 5 0.000228758
Hydrangea macrophylla Hma1.2p1_0818F.1 3 CH_hma_69 5 7 0.000000353392
Lactuca sativa Lsat_1_v8_lg_5 3 CH_lsa_216 5 5 0.000000750904
Arabidopsis thaliana Chr2 4 CH_ath_363 4 4 0.0000363613
Amborella trichopoda AmTr_v1.0_scaffold00040 4 CH_atr_231 4 5 0.000151663
Camellia sinensis var. sinensis Chr11 4 CH_camsi_651 4 5 0.000228758
Hydrangea macrophylla Hma1.2p1_0818F.1 4 CH_hma_69 5 7 0.000000353392
Lactuca sativa Lsat_1_v8_lg_5 4 CH_lsa_216 5 5 0.000000750904

Available child term results

Ontology identifier Description Number of clusters
GO:0000311 plastid large ribosomal subunit 4
GO:0000312 plastid small ribosomal subunit 10
GO:0005762 mitochondrial large ribosomal subunit 8
GO:0005763 mitochondrial small ribosomal subunit 14
GO:0015934 large ribosomal subunit 14
GO:0015935 small ribosomal subunit 18
GO:0022625 cytosolic large ribosomal subunit 6
GO:0022627 cytosolic small ribosomal subunit 10

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001