Functional clusters

Information

  • Type Gene Ontology
  • Description small ribosomal subunit

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_6 3 CH_aly_197 3 3 0.0000597242
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.02 3 CH_arhy_3 29 66 4.17025e-59
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.16 3 CH_arhy_427 4 7 0.0000194011
Cardamine hirsuta Chr6 3 CH_chi_210 3 3 0.0000556853
Capsella rubella scaffold_6 3 CH_cru_193 3 3 0.0000293018
Davidia involucrata GWHABJS00000004 3 CH_din_201 3 3 0.0000137097
Gossypium hirsutum D09 3 CH_ghi_97 6 6 0.0000000000014327
Malus domestica Chr11 3 CH_mdo_450 3 4 0.0000919257
Theobroma cacao Chromosome_9 3 CH_tca_288 3 6 0.0000900103
Arabidopsis lyrata scaffold_6 4 CH_aly_197 3 3 0.0000597242
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.02 4 CH_arhy_3 29 66 4.17025e-59
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.16 4 CH_arhy_427 4 7 0.0000194011
Cardamine hirsuta Chr6 4 CH_chi_210 3 3 0.0000556853
Capsella rubella scaffold_6 4 CH_cru_193 3 3 0.0000293018
Davidia involucrata GWHABJS00000004 4 CH_din_201 3 3 0.0000137097
Gossypium hirsutum D09 4 CH_ghi_97 6 6 0.0000000000014327
Malus domestica Chr11 4 CH_mdo_450 3 4 0.0000919257
Theobroma cacao Chromosome_9 4 CH_tca_288 3 6 0.0000900103

Available child term results

Ontology identifier Description Number of clusters
GO:0000312 plastid small ribosomal subunit 10
GO:0005763 mitochondrial small ribosomal subunit 14
GO:0022627 cytosolic small ribosomal subunit 10

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001