Functional clusters

Information

  • Type Gene Ontology
  • Description mitochondrial small ribosomal subunit

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB02 3 CH_bca_1012 2 2 0.000961939
Corylus avellana 1 3 CH_cav_379 2 2 0.000460017
Fragaria vesca Fvb2 3 CH_fve_334 2 2 0.000353461
Rhododendron simsii chr04 3 CH_rsi_293 3 7 0.00000764804
Sechium edule LG03 3 CH_sed_250 2 2 0.000428052
Sequoiadendron giganteum chr9 3 CH_sgi_1227 2 2 0.000292291
Theobroma cacao Chromosome_8 3 CH_tca_282 2 2 0.0000732386
Brassica carinata ChrB02 4 CH_bca_1012 2 2 0.000961939
Corylus avellana 1 4 CH_cav_379 2 2 0.000460017
Fragaria vesca Fvb2 4 CH_fve_334 2 2 0.000353461
Rhododendron simsii chr04 4 CH_rsi_293 3 7 0.00000764804
Sechium edule LG03 4 CH_sed_250 2 2 0.000428052
Sequoiadendron giganteum chr9 4 CH_sgi_1227 2 2 0.000292291
Theobroma cacao Chromosome_8 4 CH_tca_282 2 2 0.0000732386

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001