Functional clusters

Information

  • Type Gene Ontology
  • Description regulation of cellular protein metabolic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Gossypium hirsutum D11 3 CH_ghi_654 7 42 0.000758982
Quercus lobata 5 3 CH_qlo_767 9 73 0.0000921487
Gossypium hirsutum D11 4 CH_ghi_654 7 42 0.000758982
Quercus lobata 5 4 CH_qlo_767 9 73 0.0000921487

Available child term results

Ontology identifier Description Number of clusters
GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity 14
GO:0000288 nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay 2
GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening 8
GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA 10
GO:0006417 regulation of translation 8
GO:0010466 negative regulation of peptidase activity 14
GO:0010951 negative regulation of endopeptidase activity 28
GO:0017183 peptidyl-diphthamide biosynthetic process from peptidyl-histidine 18
GO:0031396 regulation of protein ubiquitination 2
GO:0032055 negative regulation of translation in response to stress 2
GO:0032147 activation of protein kinase activity 10
GO:0032269 negative regulation of cellular protein metabolic process 2
GO:0033184 positive regulation of histone ubiquitination 4
GO:0033234 negative regulation of protein sumoylation 6
GO:0035065 regulation of histone acetylation 6
GO:0035278 miRNA mediated inhibition of translation 56
GO:0043407 negative regulation of MAP kinase activity 2
GO:0043666 regulation of phosphoprotein phosphatase activity 4
GO:0045727 positive regulation of translation 18
GO:0045901 positive regulation of translational elongation 18
GO:0045905 positive regulation of translational termination 2
GO:0050732 negative regulation of peptidyl-tyrosine phosphorylation 2
GO:0051571 positive regulation of histone H3-K4 methylation 8
GO:0051572 negative regulation of histone H3-K4 methylation 2
GO:0051573 negative regulation of histone H3-K9 methylation 2
GO:0061158 3'-UTR-mediated mRNA destabilization 4
GO:0061866 negative regulation of histone H3-S10 phosphorylation 2
GO:0071900 regulation of protein serine/threonine kinase activity 8
GO:0072344 rescue of stalled ribosome 12
GO:0080149 sucrose induced translational repression 2
GO:0080163 regulation of protein serine/threonine phosphatase activity 6
GO:0090241 negative regulation of histone H4 acetylation 2
GO:0097167 circadian regulation of translation 4
GO:1900109 regulation of histone H3-K9 dimethylation 4
GO:1900151 regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay 2
GO:1901407 regulation of phosphorylation of RNA polymerase II C-terminal domain 2
GO:1901485 positive regulation of transcription factor catabolic process 6
GO:1901799 negative regulation of proteasomal protein catabolic process 2
GO:1901800 positive regulation of proteasomal protein catabolic process 2
GO:1902464 regulation of histone H3-K27 trimethylation 8
GO:1902466 positive regulation of histone H3-K27 trimethylation 2
GO:1902916 positive regulation of protein polyubiquitination 8
GO:1904292 regulation of ERAD pathway 2
GO:1904294 positive regulation of ERAD pathway 12
GO:1904667 negative regulation of ubiquitin protein ligase activity 8
GO:1904668 positive regulation of ubiquitin protein ligase activity 28
GO:1905183 negative regulation of protein serine/threonine phosphatase activity 2
GO:1905435 regulation of histone H3-K4 trimethylation 4
GO:2000117 negative regulation of cysteine-type endopeptidase activity 2
GO:2000541 positive regulation of protein geranylgeranylation 2
GO:2000617 positive regulation of histone H3-K9 acetylation 2
GO:2001253 regulation of histone H3-K36 trimethylation 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001