Functional clusters

Information

  • Type Gene Ontology
  • Description organelle subcompartment

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Ceratophyllum demersum 5 3 CH_cde_221 6 7 0.000953938
Magnolia biondii Chr06 3 CH_mbi_290 15 78 0.00000188714
Ceratophyllum demersum 5 4 CH_cde_221 6 7 0.000953938
Magnolia biondii Chr06 4 CH_mbi_290 15 78 0.00000188714

Available child term results

Ontology identifier Description Number of clusters
GO:0000506 glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex 10
GO:0005784 Sec61 translocon complex 8
GO:0005785 signal recognition particle receptor complex 12
GO:0005787 signal peptidase complex 18
GO:0005789 endoplasmic reticulum membrane 14
GO:0005795 Golgi stack 2
GO:0005797 Golgi medial cisterna 2
GO:0005802 trans-Golgi network 12
GO:0008250 oligosaccharyltransferase complex 6
GO:0009515 granal stacked thylakoid 2
GO:0009517 PSII associated light-harvesting complex II 2
GO:0009533 chloroplast stromal thylakoid 2
GO:0009534 chloroplast thylakoid 6
GO:0009535 chloroplast thylakoid membrane 46
GO:0009543 chloroplast thylakoid lumen 2
GO:0009923 fatty acid elongase complex 6
GO:0017059 serine C-palmitoyltransferase complex 2
GO:0030093 chloroplast photosystem I 2
GO:0030095 chloroplast photosystem II 4
GO:0030176 integral component of endoplasmic reticulum membrane 6
GO:0031976 plastid thylakoid 2
GO:0032541 cortical endoplasmic reticulum 2
GO:0032588 trans-Golgi network membrane 2
GO:0034998 oligosaccharyltransferase I complex 2
GO:0035451 extrinsic component of stromal side of plastid thylakoid membrane 2
GO:0042406 extrinsic component of endoplasmic reticulum membrane 2
GO:0042765 GPI-anchor transamidase complex 4
GO:0071458 integral component of cytoplasmic side of endoplasmic reticulum membrane 4
GO:0072546 EMC complex 20
GO:0098791 Golgi apparatus subcompartment 2
GO:0098827 endoplasmic reticulum subcompartment 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001