Functional clusters
Information
- Type Gene Ontology
- Description plastid thylakoid
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Chenopodium quinoa | C_Quinoa_Scaffold_1710 | 3 | CH_cqu_473 | 9 | 39 | 0.000462247 |
Chenopodium quinoa | C_Quinoa_Scaffold_1710 | 4 | CH_cqu_473 | 9 | 39 | 0.000462247 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
GO:0009515 | granal stacked thylakoid | 2 |
GO:0009517 | PSII associated light-harvesting complex II | 2 |
GO:0009533 | chloroplast stromal thylakoid | 2 |
GO:0009534 | chloroplast thylakoid | 6 |
GO:0009535 | chloroplast thylakoid membrane | 46 |
GO:0009543 | chloroplast thylakoid lumen | 2 |
GO:0030093 | chloroplast photosystem I | 2 |
GO:0030095 | chloroplast photosystem II | 4 |
GO:0035451 | extrinsic component of stromal side of plastid thylakoid membrane | 2 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |