Functional clusters

Information

  • Type Gene Ontology
  • Description intrinsic component of membrane

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Beta vulgaris Chr7_EL10_PGA_scaffold5 3 CH_bvu_169 16 64 0.0000670279
Cucumis melo chr06 3 CH_cme_264 10 12 0.000638852
Lonicera japonica GWHAAZE00000003 3 CH_lonja_320 7 7 0.00000565318
Pisum sativum chr4LG4 3 CH_psa_139 17 69 0.00000158837
Quercus lobata 8 3 CH_qlo_696 30 49 0.0000486026
Sequoiadendron giganteum chr9 3 CH_sgi_281 14 19 0.000000000000983641
Trochodendron aralioides group4 3 CH_tar_168 14 33 0.00000104058
Vanilla planifolia CM028153.1 3 CH_vpl_329 13 47 0.000563636
Vanilla planifolia CM028157.1 3 CH_vpl_72 9 10 0.0000000580783
Beta vulgaris Chr7_EL10_PGA_scaffold5 4 CH_bvu_169 16 64 0.0000670279
Cucumis melo chr06 4 CH_cme_264 10 12 0.000638852
Lonicera japonica GWHAAZE00000003 4 CH_lonja_320 7 7 0.00000565318
Pisum sativum chr4LG4 4 CH_psa_139 17 69 0.00000158837
Quercus lobata 8 4 CH_qlo_696 30 49 0.0000486026
Sequoiadendron giganteum chr9 4 CH_sgi_281 14 19 0.000000000000983641
Trochodendron aralioides group4 4 CH_tar_168 14 33 0.00000104058
Vanilla planifolia CM028153.1 4 CH_vpl_329 13 47 0.000563636
Vanilla planifolia CM028157.1 4 CH_vpl_72 9 10 0.0000000580783

Available child term results

Ontology identifier Description Number of clusters
GO:0005639 integral component of nuclear inner membrane 2
GO:0005747 mitochondrial respiratory chain complex I 6
GO:0005750 mitochondrial respiratory chain complex III 2
GO:0005779 integral component of peroxisomal membrane 2
GO:0005887 integral component of plasma membrane 2
GO:0016021 integral component of membrane 154
GO:0030176 integral component of endoplasmic reticulum membrane 6
GO:0031225 anchored component of membrane 84
GO:0031303 integral component of endosome membrane 4
GO:0031304 intrinsic component of mitochondrial inner membrane 2
GO:0031307 integral component of mitochondrial outer membrane 6
GO:0031357 integral component of chloroplast inner membrane 12
GO:0031359 integral component of chloroplast outer membrane 2
GO:0032592 integral component of mitochondrial membrane 4
GO:0034705 potassium channel complex 4
GO:0042765 GPI-anchor transamidase complex 4
GO:0043190 ATP-binding cassette (ABC) transporter complex 8
GO:0045271 respiratory chain complex I 6
GO:0046658 anchored component of plasma membrane 22
GO:0071458 integral component of cytoplasmic side of endoplasmic reticulum membrane 4
GO:0072546 EMC complex 20
GO:1902495 transmembrane transporter complex 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001