Functional clusters
Information
- Type Gene Ontology
- Description anchored component of membrane
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-8 | 3 | CH_aar_146 | 5 | 9 | 0.0000777438 |
| Arabidopsis thaliana | Chr3 | 3 | CH_ath_380 | 5 | 9 | 0.0000506998 |
| Brassica carinata | ChrC05 | 3 | CH_bca_866 | 4 | 5 | 0.000595413 |
| Capsicum annuum | PGAv.1.6.scaffold473 | 3 | CH_can_251 | 4 | 4 | 0.0000163933 |
| Cicer arietinum L. | Ca_LG8_v3 | 3 | CH_car_59 | 8 | 53 | 0.00000443305 |
| Corylus avellana | 3 | 3 | CH_cav_151 | 5 | 7 | 0.00000209187 |
| Citrus clementina | scaffold_5 | 3 | CH_ccl_172 | 7 | 17 | 0.000000157128 |
| Citrus clementina | scaffold_2 | 3 | CH_ccl_185 | 5 | 5 | 0.000000229628 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1529 | 3 | CH_cqu_349 | 7 | 44 | 0.0000882666 |
| Capsella rubella | scaffold_3 | 3 | CH_cru_310 | 4 | 4 | 0.000442583 |
| Durio zibethinus | NW_019167938.1 | 3 | CH_dzi_209 | 4 | 4 | 0.0000497958 |
| Eucalyptus grandis | Chr10 | 3 | CH_egr_493 | 5 | 6 | 0.000000552414 |
| Erythranthe guttata | scaffold_11 | 3 | CH_egut_184 | 6 | 11 | 0.000000732328 |
| Erythranthe guttata | scaffold_7 | 3 | CH_egut_396 | 4 | 6 | 0.000634573 |
| Eutrema salsugineum | scaffold_13 | 3 | CH_esa_209 | 4 | 4 | 0.000238946 |
| Gossypium hirsutum | A07 | 3 | CH_ghi_446 | 6 | 25 | 0.000131315 |
| Gossypium raimondii | Chr03 | 3 | CH_gra_268 | 4 | 5 | 0.000161237 |
| Gossypium raimondii | Chr01 | 3 | CH_gra_313 | 6 | 29 | 0.000396011 |
| Hydrangea macrophylla | Hma1.2p1_1572F.1 | 3 | CH_hma_74 | 5 | 6 | 0.000000417211 |
| Lotus japonicus | Contig00222 | 3 | CH_lja_260 | 4 | 5 | 0.00021085 |
| Lonicera japonica | GWHAAZE00000006 | 3 | CH_lonja_160 | 8 | 20 | 0.000000000521673 |
| Lonicera japonica | GWHAAZE00000003 | 3 | CH_lonja_281 | 6 | 15 | 0.00000115192 |
| Manihot esculenta | Chromosome08 | 3 | CH_mes_267 | 4 | 4 | 0.0000558818 |
| Medicago truncatula | chr1 | 3 | CH_mtr_416 | 4 | 4 | 0.00000767624 |
| Punica granatum | NC_045131.1 | 3 | CH_pgr_232 | 5 | 9 | 0.0000290219 |
| Prunus persica | Pp03 | 3 | CH_ppe_286 | 4 | 4 | 0.000029565 |
| Papaver somniferum | NC_039362.1 | 3 | CH_pso_562 | 4 | 6 | 0.000227754 |
| Populus trichocarpa | Chr17 | 3 | CH_ptr_332 | 4 | 4 | 0.0000768014 |
| Quercus lobata | 6 | 3 | CH_qlo_517 | 8 | 37 | 0.00000095395 |
| Quercus lobata | 10 | 3 | CH_qlo_626 | 5 | 8 | 0.0000102611 |
| Quercus lobata | 3 | 3 | CH_qlo_861 | 5 | 13 | 0.000230565 |
| Salvia bowleyana | GWHASIU00000008 | 3 | CH_sbo_436 | 7 | 78 | 0.000367127 |
| Sechium edule | LG09 | 3 | CH_sed_90 | 5 | 5 | 0.000000258242 |
| Sequoiadendron giganteum | chr3 | 3 | CH_sgi_913 | 4 | 5 | 0.0000350358 |
| Solanum lycopersicum | SL4.0ch09 | 3 | CH_sly_200 | 5 | 5 | 0.000000543068 |
| Solanum lycopersicum | SL4.0ch09 | 3 | CH_sly_372 | 4 | 4 | 0.0000790744 |
| Schrenkiella parvula | ch3-1 | 3 | CH_spa_42 | 6 | 7 | 0.0000000910818 |
| Solanum tuberosum | ST4.03ch09 | 3 | CH_stu_400 | 6 | 18 | 0.0000598509 |
| Solanum tuberosum | ST4.03ch09 | 3 | CH_stu_410 | 4 | 4 | 0.0000786639 |
| Trochodendron aralioides | group16 | 3 | CH_tar_139 | 5 | 5 | 0.000000234881 |
| Trochodendron aralioides | group2 | 3 | CH_tar_253 | 4 | 4 | 0.0000403292 |
| Tripterygium wilfordii | NC_052249.1 | 3 | CH_twi_324 | 4 | 6 | 0.000790058 |
| Aethionema arabicum | LG-8 | 4 | CH_aar_146 | 5 | 9 | 0.0000777438 |
| Arabidopsis thaliana | Chr3 | 4 | CH_ath_380 | 5 | 9 | 0.0000506998 |
| Brassica carinata | ChrC05 | 4 | CH_bca_866 | 4 | 5 | 0.000595413 |
| Capsicum annuum | PGAv.1.6.scaffold473 | 4 | CH_can_251 | 4 | 4 | 0.0000163933 |
| Cicer arietinum L. | Ca_LG8_v3 | 4 | CH_car_59 | 8 | 53 | 0.00000443305 |
| Corylus avellana | 3 | 4 | CH_cav_151 | 5 | 7 | 0.00000209187 |
| Citrus clementina | scaffold_5 | 4 | CH_ccl_172 | 7 | 17 | 0.000000157128 |
| Citrus clementina | scaffold_2 | 4 | CH_ccl_185 | 5 | 5 | 0.000000229628 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1529 | 4 | CH_cqu_349 | 7 | 44 | 0.0000882666 |
| Capsella rubella | scaffold_3 | 4 | CH_cru_310 | 4 | 4 | 0.000442583 |
| Durio zibethinus | NW_019167938.1 | 4 | CH_dzi_209 | 4 | 4 | 0.0000497958 |
| Eucalyptus grandis | Chr10 | 4 | CH_egr_493 | 5 | 6 | 0.000000552414 |
| Erythranthe guttata | scaffold_11 | 4 | CH_egut_184 | 6 | 11 | 0.000000732328 |
| Erythranthe guttata | scaffold_7 | 4 | CH_egut_396 | 4 | 6 | 0.000634573 |
| Eutrema salsugineum | scaffold_13 | 4 | CH_esa_209 | 4 | 4 | 0.000238946 |
| Gossypium hirsutum | A07 | 4 | CH_ghi_446 | 6 | 25 | 0.000131315 |
| Gossypium raimondii | Chr03 | 4 | CH_gra_268 | 4 | 5 | 0.000161237 |
| Gossypium raimondii | Chr01 | 4 | CH_gra_313 | 6 | 29 | 0.000396011 |
| Hydrangea macrophylla | Hma1.2p1_1572F.1 | 4 | CH_hma_74 | 5 | 6 | 0.000000417211 |
| Lotus japonicus | Contig00222 | 4 | CH_lja_260 | 4 | 5 | 0.00021085 |
| Lonicera japonica | GWHAAZE00000006 | 4 | CH_lonja_160 | 8 | 20 | 0.000000000521673 |
| Lonicera japonica | GWHAAZE00000003 | 4 | CH_lonja_281 | 6 | 15 | 0.00000115192 |
| Manihot esculenta | Chromosome08 | 4 | CH_mes_267 | 4 | 4 | 0.0000558818 |
| Medicago truncatula | chr1 | 4 | CH_mtr_416 | 4 | 4 | 0.00000767624 |
| Punica granatum | NC_045131.1 | 4 | CH_pgr_232 | 5 | 9 | 0.0000290219 |
| Prunus persica | Pp03 | 4 | CH_ppe_286 | 4 | 4 | 0.000029565 |
| Papaver somniferum | NC_039362.1 | 4 | CH_pso_562 | 4 | 6 | 0.000227754 |
| Populus trichocarpa | Chr17 | 4 | CH_ptr_332 | 4 | 4 | 0.0000768014 |
| Quercus lobata | 6 | 4 | CH_qlo_517 | 8 | 37 | 0.00000095395 |
| Quercus lobata | 10 | 4 | CH_qlo_626 | 5 | 8 | 0.0000102611 |
| Quercus lobata | 3 | 4 | CH_qlo_861 | 5 | 13 | 0.000230565 |
| Salvia bowleyana | GWHASIU00000008 | 4 | CH_sbo_436 | 7 | 78 | 0.000367127 |
| Sechium edule | LG09 | 4 | CH_sed_90 | 5 | 5 | 0.000000258242 |
| Sequoiadendron giganteum | chr3 | 4 | CH_sgi_913 | 4 | 5 | 0.0000350358 |
| Solanum lycopersicum | SL4.0ch09 | 4 | CH_sly_200 | 5 | 5 | 0.000000543068 |
| Solanum lycopersicum | SL4.0ch09 | 4 | CH_sly_372 | 4 | 4 | 0.0000790744 |
| Schrenkiella parvula | ch3-1 | 4 | CH_spa_42 | 6 | 7 | 0.0000000910818 |
| Solanum tuberosum | ST4.03ch09 | 4 | CH_stu_400 | 6 | 18 | 0.0000598509 |
| Solanum tuberosum | ST4.03ch09 | 4 | CH_stu_410 | 4 | 4 | 0.0000786639 |
| Trochodendron aralioides | group16 | 4 | CH_tar_139 | 5 | 5 | 0.000000234881 |
| Trochodendron aralioides | group2 | 4 | CH_tar_253 | 4 | 4 | 0.0000403292 |
| Tripterygium wilfordii | NC_052249.1 | 4 | CH_twi_324 | 4 | 6 | 0.000790058 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0046658 | anchored component of plasma membrane | 22 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |