Functional clusters

Information

  • Type Gene Ontology
  • Description fruit development

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Citrus clementina scaffold_3 3 CH_ccl_191 5 10 0.000000388617
Olea europaea chr17 3 CH_oeu_256 3 3 0.000214199
Citrus clementina scaffold_3 4 CH_ccl_191 5 10 0.000000388617
Olea europaea chr17 4 CH_oeu_256 3 3 0.000214199

Available child term results

Ontology identifier Description Number of clusters
GO:0009793 embryo development ending in seed dormancy 26
GO:0009829 cell wall modification involved in fruit ripening 2
GO:0009835 fruit ripening 2
GO:0009942 longitudinal axis specification 2
GO:0009960 endosperm development 16
GO:0010071 root meristem specification 6
GO:0010231 maintenance of seed dormancy 4
GO:0010431 seed maturation 2
GO:0010588 cotyledon vascular tissue pattern formation 4
GO:0010654 apical cell fate commitment 2
GO:0048317 seed morphogenesis 4
GO:0048354 mucilage biosynthetic process involved in seed coat development 4
GO:0048359 mucilage metabolic process involved in seed coat development 6
GO:0048530 fruit morphogenesis 2
GO:0048700 acquisition of desiccation tolerance in seed 32
GO:0080001 mucilage extrusion from seed coat 2
GO:0080127 fruit septum development 6
GO:0098755 maintenance of seed dormancy by absisic acid 6
GO:1902039 negative regulation of seed dormancy process 6
GO:1990058 fruit replum development 4
GO:1990059 fruit valve development 2
GO:2000033 regulation of seed dormancy process 54

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001