Functional clusters

Information

  • Type Gene Ontology
  • Description lipid binding

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Corylus avellana 8 3 CH_cav_426 6 22 0.000780537
Helianthus annuus HanXRQChr12 3 CH_han_381 5 6 0.00000730792
Lupinus albus Lalb_Chr08 3 CH_lal_357 4 4 0.000493425
Magnolia biondii Chr19 3 CH_mbi_262 9 59 0.000000813412
Pisum sativum chr4LG4 3 CH_psa_330 6 25 0.000364707
Sechium edule LG12 3 CH_sed_283 4 5 0.000729365
Sequoiadendron giganteum chr4 3 CH_sgi_361 7 8 0.000000000047056
Solanum tuberosum ST4.03ch06 3 CH_stu_269 6 10 0.00000202294
Trifolium pratense Tp57577_TGAC_v2_LG5 3 CH_tpr_240 4 4 0.000119127
Corylus avellana 8 4 CH_cav_426 6 22 0.000780537
Helianthus annuus HanXRQChr12 4 CH_han_381 5 6 0.00000730792
Lupinus albus Lalb_Chr08 4 CH_lal_357 4 4 0.000493425
Magnolia biondii Chr19 4 CH_mbi_262 9 59 0.000000813412
Pisum sativum chr4LG4 4 CH_psa_330 6 25 0.000364707
Sechium edule LG12 4 CH_sed_283 4 5 0.000729365
Sequoiadendron giganteum chr4 4 CH_sgi_361 7 8 0.000000000047056
Solanum tuberosum ST4.03ch06 4 CH_stu_269 6 10 0.00000202294
Trifolium pratense Tp57577_TGAC_v2_LG5 4 CH_tpr_240 4 4 0.000119127

Available child term results

Ontology identifier Description Number of clusters
GO:0001530 lipopolysaccharide binding 2
GO:0001786 phosphatidylserine binding 4
GO:0005496 steroid binding 2
GO:0005504 fatty acid binding 62
GO:0005543 phospholipid binding 10
GO:0005544 calcium-dependent phospholipid binding 186
GO:0005545 1-phosphatidylinositol binding 2
GO:0008429 phosphatidylethanolamine binding 12
GO:0010331 gibberellin binding 4
GO:0010427 abscisic acid binding 174
GO:0031210 phosphatidylcholine binding 4
GO:0032934 sterol binding 6
GO:0051738 xanthophyll binding 2
GO:0070273 phosphatidylinositol-4-phosphate binding 2
GO:0070300 phosphatidic acid binding 2
GO:0080025 phosphatidylinositol-3,5-bisphosphate binding 2
GO:0090411 brassinosteroid binding 36
GO:1901612 cardiolipin binding 8

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001