Functional clusters
Information
- Type Gene Ontology
- Description lipid binding
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Corylus avellana | 8 | 3 | CH_cav_426 | 6 | 22 | 0.000780537 |
Helianthus annuus | HanXRQChr12 | 3 | CH_han_381 | 5 | 6 | 0.00000730792 |
Lupinus albus | Lalb_Chr08 | 3 | CH_lal_357 | 4 | 4 | 0.000493425 |
Magnolia biondii | Chr19 | 3 | CH_mbi_262 | 9 | 59 | 0.000000813412 |
Pisum sativum | chr4LG4 | 3 | CH_psa_330 | 6 | 25 | 0.000364707 |
Sechium edule | LG12 | 3 | CH_sed_283 | 4 | 5 | 0.000729365 |
Sequoiadendron giganteum | chr4 | 3 | CH_sgi_361 | 7 | 8 | 0.000000000047056 |
Solanum tuberosum | ST4.03ch06 | 3 | CH_stu_269 | 6 | 10 | 0.00000202294 |
Trifolium pratense | Tp57577_TGAC_v2_LG5 | 3 | CH_tpr_240 | 4 | 4 | 0.000119127 |
Corylus avellana | 8 | 4 | CH_cav_426 | 6 | 22 | 0.000780537 |
Helianthus annuus | HanXRQChr12 | 4 | CH_han_381 | 5 | 6 | 0.00000730792 |
Lupinus albus | Lalb_Chr08 | 4 | CH_lal_357 | 4 | 4 | 0.000493425 |
Magnolia biondii | Chr19 | 4 | CH_mbi_262 | 9 | 59 | 0.000000813412 |
Pisum sativum | chr4LG4 | 4 | CH_psa_330 | 6 | 25 | 0.000364707 |
Sechium edule | LG12 | 4 | CH_sed_283 | 4 | 5 | 0.000729365 |
Sequoiadendron giganteum | chr4 | 4 | CH_sgi_361 | 7 | 8 | 0.000000000047056 |
Solanum tuberosum | ST4.03ch06 | 4 | CH_stu_269 | 6 | 10 | 0.00000202294 |
Trifolium pratense | Tp57577_TGAC_v2_LG5 | 4 | CH_tpr_240 | 4 | 4 | 0.000119127 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
GO:0001530 | lipopolysaccharide binding | 2 |
GO:0001786 | phosphatidylserine binding | 4 |
GO:0005496 | steroid binding | 2 |
GO:0005504 | fatty acid binding | 62 |
GO:0005543 | phospholipid binding | 10 |
GO:0005544 | calcium-dependent phospholipid binding | 186 |
GO:0005545 | 1-phosphatidylinositol binding | 2 |
GO:0008429 | phosphatidylethanolamine binding | 12 |
GO:0010331 | gibberellin binding | 4 |
GO:0010427 | abscisic acid binding | 174 |
GO:0031210 | phosphatidylcholine binding | 4 |
GO:0032934 | sterol binding | 6 |
GO:0051738 | xanthophyll binding | 2 |
GO:0070273 | phosphatidylinositol-4-phosphate binding | 2 |
GO:0070300 | phosphatidic acid binding | 2 |
GO:0080025 | phosphatidylinositol-3,5-bisphosphate binding | 2 |
GO:0090411 | brassinosteroid binding | 36 |
GO:1901612 | cardiolipin binding | 8 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |