Functional clusters
Information
- Type Gene Ontology
- Description brassinosteroid binding
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00117 | 3 | CH_atr_242 | 2 | 5 | 0.000238313 |
| Beta vulgaris | Chr7_EL10_PGA_scaffold5 | 3 | CH_bvu_206 | 2 | 3 | 0.000248365 |
| Cannabis sativa | NC_044371.1 | 3 | CH_cansat_46 | 4 | 4 | 0.000000000000849474 |
| Citrus clementina | scaffold_3 | 3 | CH_ccl_73 | 5 | 15 | 0.00000000000101967 |
| Carya illinoinensis | Chr12 | 3 | CH_cil_464 | 2 | 2 | 0.000371897 |
| Davidia involucrata | GWHABJS00000013 | 3 | CH_din_291 | 2 | 2 | 0.000150038 |
| Eucalyptus grandis | Chr06 | 3 | CH_egr_45 | 9 | 16 | 2.23405e-27 |
| Helianthus annuus | HanXRQChr08 | 3 | CH_han_270 | 3 | 5 | 0.000000223973 |
| Lotus japonicus | chr3 | 3 | CH_lja_358 | 2 | 2 | 0.000715077 |
| Manihot esculenta | Chromosome03 | 3 | CH_mes_276 | 2 | 2 | 0.0000610631 |
| Nelumbo nucifera | chr4 | 3 | CH_nnu_71 | 3 | 4 | 0.0000000139212 |
| Populus trichocarpa | Chr11 | 3 | CH_ptr_34 | 7 | 16 | 3.35989e-20 |
| Sechium edule | LG04 | 3 | CH_sed_179 | 2 | 2 | 0.0000713419 |
| Selaginella moellendorffii | scaffold_15 | 3 | CH_smo_12 | 6 | 11 | 0.0000000000000680971 |
| Trifolium pratense | Tp57577_TGAC_v2_LG7 | 3 | CH_tpr_27 | 4 | 4 | 0.00000000000130141 |
| Vaccinium macrocarpon | chr11_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_278 | 2 | 3 | 0.000278759 |
| Vigna mungo | CM024079.1 | 3 | CH_vmu_186 | 2 | 2 | 0.0000646141 |
| Vitis vinifera | chr19 | 3 | CH_vvi_20 | 10 | 41 | 7.44228e-24 |
| Amborella trichopoda | AmTr_v1.0_scaffold00117 | 4 | CH_atr_242 | 2 | 5 | 0.000238313 |
| Beta vulgaris | Chr7_EL10_PGA_scaffold5 | 4 | CH_bvu_206 | 2 | 3 | 0.000248365 |
| Cannabis sativa | NC_044371.1 | 4 | CH_cansat_46 | 4 | 4 | 0.000000000000849474 |
| Citrus clementina | scaffold_3 | 4 | CH_ccl_73 | 5 | 15 | 0.00000000000101967 |
| Carya illinoinensis | Chr12 | 4 | CH_cil_464 | 2 | 2 | 0.000371897 |
| Davidia involucrata | GWHABJS00000013 | 4 | CH_din_291 | 2 | 2 | 0.000150038 |
| Eucalyptus grandis | Chr06 | 4 | CH_egr_45 | 9 | 16 | 2.23405e-27 |
| Helianthus annuus | HanXRQChr08 | 4 | CH_han_270 | 3 | 5 | 0.000000223973 |
| Lotus japonicus | chr3 | 4 | CH_lja_358 | 2 | 2 | 0.000715077 |
| Manihot esculenta | Chromosome03 | 4 | CH_mes_276 | 2 | 2 | 0.0000610631 |
| Nelumbo nucifera | chr4 | 4 | CH_nnu_71 | 3 | 4 | 0.0000000139212 |
| Populus trichocarpa | Chr11 | 4 | CH_ptr_34 | 7 | 16 | 3.35989e-20 |
| Sechium edule | LG04 | 4 | CH_sed_179 | 2 | 2 | 0.0000713419 |
| Selaginella moellendorffii | scaffold_15 | 4 | CH_smo_12 | 6 | 11 | 0.0000000000000680971 |
| Trifolium pratense | Tp57577_TGAC_v2_LG7 | 4 | CH_tpr_27 | 4 | 4 | 0.00000000000130141 |
| Vaccinium macrocarpon | chr11_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_278 | 2 | 3 | 0.000278759 |
| Vigna mungo | CM024079.1 | 4 | CH_vmu_186 | 2 | 2 | 0.0000646141 |
| Vitis vinifera | chr19 | 4 | CH_vvi_20 | 10 | 41 | 7.44228e-24 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |