Functional clusters
Information
- Type Gene Ontology
- Description fatty acid binding
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_8 | 3 | CH_aly_157 | 3 | 4 | 0.00000951219 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.19 | 3 | CH_arhy_229 | 4 | 5 | 0.00000000706227 |
| Arabidopsis thaliana | Chr5 | 3 | CH_ath_455 | 3 | 10 | 0.000142975 |
| Amborella trichopoda | AmTr_v1.0_scaffold00005 | 3 | CH_atr_94 | 4 | 8 | 0.000000105248 |
| Brassica napus | A02 | 3 | CH_bna_338 | 3 | 3 | 0.0000114214 |
| Brassica napus | C02 | 3 | CH_bna_576 | 3 | 7 | 0.000399191 |
| Brassica napus | A10 | 3 | CH_bna_638 | 3 | 8 | 0.000638481 |
| Brassica oleracea | C2 | 3 | CH_bol_194 | 3 | 3 | 0.00000416677 |
| Brassica rapa | A02 | 3 | CH_bra_127 | 3 | 3 | 0.0000048963 |
| Brassica rapa | A10 | 3 | CH_bra_183 | 3 | 6 | 0.0000978252 |
| Beta vulgaris | Chr5_EL10_PGA_scaffold2 | 3 | CH_bvu_35 | 5 | 6 | 0.00000000000167444 |
| Citrus clementina | scaffold_6 | 3 | CH_ccl_221 | 3 | 3 | 0.0000028869 |
| Carpinus fangiana | Cfa01 | 3 | CH_cfa_158 | 3 | 4 | 0.00000289032 |
| Cardamine hirsuta | Chr8 | 3 | CH_chi_154 | 3 | 3 | 0.00000260868 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1703 | 3 | CH_cqu_59 | 5 | 6 | 0.000000000000681071 |
| Capsella rubella | scaffold_8 | 3 | CH_cru_94 | 4 | 6 | 0.0000000239943 |
| Durio zibethinus | NW_019168492.1 | 3 | CH_dzi_23 | 8 | 40 | 0.00000000000000352577 |
| Eucalyptus grandis | Chr07 | 3 | CH_egr_411 | 4 | 6 | 0.0000000214593 |
| Eutrema salsugineum | scaffold_2 | 3 | CH_esa_110 | 3 | 3 | 0.00000395783 |
| Glycine max | Gm18 | 3 | CH_gma_15 | 9 | 9 | 5.75122e-25 |
| Medicago truncatula | chr4 | 3 | CH_mtr_176 | 4 | 4 | 0.000000000378714 |
| Nelumbo nucifera | chr1 | 3 | CH_nnu_137 | 3 | 4 | 0.00000306216 |
| Oryza sativa ssp. japonica | chr07 | 3 | CH_osa_375 | 3 | 9 | 0.000238544 |
| Punica granatum | NC_045128.1 | 3 | CH_pgr_114 | 4 | 6 | 0.0000000190198 |
| Physcomitrium patens | Chr11 | 3 | CH_ppa_150 | 3 | 4 | 0.000189877 |
| Physcomitrium patens | Chr11 | 3 | CH_ppa_7 | 7 | 22 | 0.00000000000885802 |
| Prunus persica | Pp02 | 3 | CH_ppe_249 | 3 | 3 | 0.00000379798 |
| Pisum sativum | chr7LG7 | 3 | CH_psa_118 | 3 | 3 | 0.000000489798 |
| Quercus lobata | 8 | 3 | CH_qlo_551 | 3 | 4 | 0.00000263848 |
| Simmondsia chinensis | GWHAASQ00000017 | 3 | CH_sci_10 | 7 | 8 | 8.23977e-19 |
| Sequoiadendron giganteum | chr1 | 3 | CH_sgi_1284 | 2 | 2 | 0.000487151 |
| Arabidopsis lyrata | scaffold_8 | 4 | CH_aly_157 | 3 | 4 | 0.00000951219 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.19 | 4 | CH_arhy_229 | 4 | 5 | 0.00000000706227 |
| Arabidopsis thaliana | Chr5 | 4 | CH_ath_455 | 3 | 10 | 0.000142975 |
| Amborella trichopoda | AmTr_v1.0_scaffold00005 | 4 | CH_atr_94 | 4 | 8 | 0.000000105248 |
| Brassica napus | A02 | 4 | CH_bna_338 | 3 | 3 | 0.0000114214 |
| Brassica napus | C02 | 4 | CH_bna_576 | 3 | 7 | 0.000399191 |
| Brassica napus | A10 | 4 | CH_bna_638 | 3 | 8 | 0.000638481 |
| Brassica oleracea | C2 | 4 | CH_bol_194 | 3 | 3 | 0.00000416677 |
| Brassica rapa | A02 | 4 | CH_bra_127 | 3 | 3 | 0.0000048963 |
| Brassica rapa | A10 | 4 | CH_bra_183 | 3 | 6 | 0.0000978252 |
| Beta vulgaris | Chr5_EL10_PGA_scaffold2 | 4 | CH_bvu_35 | 5 | 6 | 0.00000000000167444 |
| Citrus clementina | scaffold_6 | 4 | CH_ccl_221 | 3 | 3 | 0.0000028869 |
| Carpinus fangiana | Cfa01 | 4 | CH_cfa_158 | 3 | 4 | 0.00000289032 |
| Cardamine hirsuta | Chr8 | 4 | CH_chi_154 | 3 | 3 | 0.00000260868 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1703 | 4 | CH_cqu_59 | 5 | 6 | 0.000000000000681071 |
| Capsella rubella | scaffold_8 | 4 | CH_cru_94 | 4 | 6 | 0.0000000239943 |
| Durio zibethinus | NW_019168492.1 | 4 | CH_dzi_23 | 8 | 40 | 0.00000000000000352577 |
| Eucalyptus grandis | Chr07 | 4 | CH_egr_411 | 4 | 6 | 0.0000000214593 |
| Eutrema salsugineum | scaffold_2 | 4 | CH_esa_110 | 3 | 3 | 0.00000395783 |
| Glycine max | Gm18 | 4 | CH_gma_15 | 9 | 9 | 5.75122e-25 |
| Medicago truncatula | chr4 | 4 | CH_mtr_176 | 4 | 4 | 0.000000000378714 |
| Nelumbo nucifera | chr1 | 4 | CH_nnu_137 | 3 | 4 | 0.00000306216 |
| Oryza sativa ssp. japonica | chr07 | 4 | CH_osa_375 | 3 | 9 | 0.000238544 |
| Punica granatum | NC_045128.1 | 4 | CH_pgr_114 | 4 | 6 | 0.0000000190198 |
| Physcomitrium patens | Chr11 | 4 | CH_ppa_150 | 3 | 4 | 0.000189877 |
| Physcomitrium patens | Chr11 | 4 | CH_ppa_7 | 7 | 22 | 0.00000000000885802 |
| Prunus persica | Pp02 | 4 | CH_ppe_249 | 3 | 3 | 0.00000379798 |
| Pisum sativum | chr7LG7 | 4 | CH_psa_118 | 3 | 3 | 0.000000489798 |
| Quercus lobata | 8 | 4 | CH_qlo_551 | 3 | 4 | 0.00000263848 |
| Simmondsia chinensis | GWHAASQ00000017 | 4 | CH_sci_10 | 7 | 8 | 8.23977e-19 |
| Sequoiadendron giganteum | chr1 | 4 | CH_sgi_1284 | 2 | 2 | 0.000487151 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |