Functional clusters
Information
- Type Gene Ontology
- Description nucleocytoplasmic transport
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Cicer arietinum L. | Ca_LG5_v3 | 3 | CH_car_171 | 3 | 4 | 0.000331809 |
Cucumis sativus L. | chr1 | 3 | CH_csa_173 | 4 | 12 | 0.0000565365 |
Eucalyptus grandis | Chr03 | 3 | CH_egr_238 | 6 | 8 | 0.00000000000263336 |
Medicago truncatula | chr3 | 3 | CH_mtr_462 | 3 | 3 | 0.0000312496 |
Simmondsia chinensis | GWHAASQ00000006 | 3 | CH_sci_172 | 3 | 3 | 0.0000993808 |
Cicer arietinum L. | Ca_LG5_v3 | 4 | CH_car_171 | 3 | 4 | 0.000331809 |
Cucumis sativus L. | chr1 | 4 | CH_csa_173 | 4 | 12 | 0.0000565365 |
Eucalyptus grandis | Chr03 | 4 | CH_egr_238 | 6 | 8 | 0.00000000000263336 |
Medicago truncatula | chr3 | 4 | CH_mtr_462 | 3 | 3 | 0.0000312496 |
Simmondsia chinensis | GWHAASQ00000006 | 4 | CH_sci_172 | 3 | 3 | 0.0000993808 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
GO:0000055 | ribosomal large subunit export from nucleus | 38 |
GO:0000056 | ribosomal small subunit export from nucleus | 22 |
GO:0006405 | RNA export from nucleus | 16 |
GO:0006406 | mRNA export from nucleus | 4 |
GO:0006408 | snRNA export from nucleus | 8 |
GO:0006409 | tRNA export from nucleus | 2 |
GO:0006606 | protein import into nucleus | 54 |
GO:0006611 | protein export from nucleus | 16 |
GO:0016973 | poly(A)+ mRNA export from nucleus | 8 |
GO:0042306 | regulation of protein import into nucleus | 10 |
GO:0051168 | nuclear export | 14 |
GO:0061015 | snRNA import into nucleus | 8 |
GO:0071528 | tRNA re-export from nucleus | 10 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |