Functional clusters
Information
- Type Gene Ontology
- Description RNA export from nucleus
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Camellia sinensis var. sinensis | Chr7 | 3 | CH_camsi_359 | 3 | 3 | 0.00000214476 |
| Ceratophyllum demersum | 1 | 3 | CH_cde_98 | 3 | 5 | 0.0000762795 |
| Carica papaya | supercontig_119 | 3 | CH_cpa_113 | 3 | 4 | 0.00000894463 |
| Fragaria x ananassa | Fvb3-4 | 3 | CH_fan_287 | 3 | 3 | 0.0000142364 |
| Hydrangea macrophylla | Hma1.2p1_0589F.1 | 3 | CH_hma_95 | 3 | 4 | 0.00000222136 |
| Petunia axillaris | Peaxi162Scf00186 | 3 | CH_pax_128 | 3 | 3 | 0.00000212359 |
| Quercus lobata | 1 | 3 | CH_qlo_347 | 4 | 5 | 0.0000000079991 |
| Sequoiadendron giganteum | chr2 | 3 | CH_sgi_805 | 3 | 4 | 0.00000518195 |
| Camellia sinensis var. sinensis | Chr7 | 4 | CH_camsi_359 | 3 | 3 | 0.00000214476 |
| Ceratophyllum demersum | 1 | 4 | CH_cde_98 | 3 | 5 | 0.0000762795 |
| Carica papaya | supercontig_119 | 4 | CH_cpa_113 | 3 | 4 | 0.00000894463 |
| Fragaria x ananassa | Fvb3-4 | 4 | CH_fan_287 | 3 | 3 | 0.0000142364 |
| Hydrangea macrophylla | Hma1.2p1_0589F.1 | 4 | CH_hma_95 | 3 | 4 | 0.00000222136 |
| Petunia axillaris | Peaxi162Scf00186 | 4 | CH_pax_128 | 3 | 3 | 0.00000212359 |
| Quercus lobata | 1 | 4 | CH_qlo_347 | 4 | 5 | 0.0000000079991 |
| Sequoiadendron giganteum | chr2 | 4 | CH_sgi_805 | 3 | 4 | 0.00000518195 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0006406 | mRNA export from nucleus | 4 |
| GO:0006408 | snRNA export from nucleus | 8 |
| GO:0006409 | tRNA export from nucleus | 2 |
| GO:0016973 | poly(A)+ mRNA export from nucleus | 8 |
| GO:0071528 | tRNA re-export from nucleus | 10 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |