Functional clusters
Information
- Type Gene Ontology
- Description ribosomal large subunit export from nucleus
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Acer truncatum | chr11 | 3 | CH_acertr_506 | 2 | 2 | 0.00070497 |
Actinidia chinensis | Lachesis_group15 | 3 | CH_ach_272 | 2 | 2 | 0.000814819 |
Amaranthus hybridus | AmaHy_arrow1_Scaffold_8 | 3 | CH_amhyb_156 | 2 | 2 | 0.000252525 |
Aquilegia oxysepala | CHR06 | 3 | CH_aox_26 | 4 | 4 | 0.000000000195007 |
Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.05 | 3 | CH_arhy_287 | 3 | 3 | 0.000000221838 |
Amborella trichopoda | AmTr_v1.0_scaffold00049 | 3 | CH_atr_329 | 2 | 2 | 0.000794407 |
Brassica napus | C02 | 3 | CH_bna_96 | 4 | 7 | 0.000000000221557 |
Brassica oleracea | C2 | 3 | CH_bol_152 | 3 | 6 | 0.000000640939 |
Lupinus albus | Lalb_Chr20 | 3 | CH_lal_336 | 2 | 2 | 0.000314895 |
Medicago truncatula | chr4 | 3 | CH_mtr_689 | 2 | 2 | 0.000410863 |
Nicotiana tabacum | Nitab4.5_0000433 | 3 | CH_nta_109 | 2 | 3 | 0.000329164 |
Petunia axillaris | Peaxi162Scf00226 | 3 | CH_pax_297 | 2 | 2 | 0.000422134 |
Simmondsia chinensis | GWHAASQ00000004 | 3 | CH_sci_275 | 2 | 2 | 0.000851426 |
Sapria himalayana | scaffold23_8152026 | 3 | CH_shi_255 | 2 | 2 | 0.000857706 |
Schrenkiella parvula | ch5-6 | 3 | CH_spa_46 | 3 | 3 | 0.0000000929892 |
Trochodendron aralioides | group1 | 3 | CH_tar_459 | 2 | 2 | 0.000600366 |
Trifolium pratense | Tp57577_TGAC_v2_scaf_503 | 3 | CH_tpr_360 | 2 | 2 | 0.000756974 |
Vaccinium macrocarpon | chr5_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_142 | 3 | 4 | 0.00000181306 |
Vigna mungo | CM024077.1 | 3 | CH_vmu_35 | 4 | 4 | 0.0000000000566556 |
Acer truncatum | chr11 | 4 | CH_acertr_506 | 2 | 2 | 0.00070497 |
Actinidia chinensis | Lachesis_group15 | 4 | CH_ach_272 | 2 | 2 | 0.000814819 |
Amaranthus hybridus | AmaHy_arrow1_Scaffold_8 | 4 | CH_amhyb_156 | 2 | 2 | 0.000252525 |
Aquilegia oxysepala | CHR06 | 4 | CH_aox_26 | 4 | 4 | 0.000000000195007 |
Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.05 | 4 | CH_arhy_287 | 3 | 3 | 0.000000221838 |
Amborella trichopoda | AmTr_v1.0_scaffold00049 | 4 | CH_atr_329 | 2 | 2 | 0.000794407 |
Brassica napus | C02 | 4 | CH_bna_96 | 4 | 7 | 0.000000000221557 |
Brassica oleracea | C2 | 4 | CH_bol_152 | 3 | 6 | 0.000000640939 |
Lupinus albus | Lalb_Chr20 | 4 | CH_lal_336 | 2 | 2 | 0.000314895 |
Medicago truncatula | chr4 | 4 | CH_mtr_689 | 2 | 2 | 0.000410863 |
Nicotiana tabacum | Nitab4.5_0000433 | 4 | CH_nta_109 | 2 | 3 | 0.000329164 |
Petunia axillaris | Peaxi162Scf00226 | 4 | CH_pax_297 | 2 | 2 | 0.000422134 |
Simmondsia chinensis | GWHAASQ00000004 | 4 | CH_sci_275 | 2 | 2 | 0.000851426 |
Sapria himalayana | scaffold23_8152026 | 4 | CH_shi_255 | 2 | 2 | 0.000857706 |
Schrenkiella parvula | ch5-6 | 4 | CH_spa_46 | 3 | 3 | 0.0000000929892 |
Trochodendron aralioides | group1 | 4 | CH_tar_459 | 2 | 2 | 0.000600366 |
Trifolium pratense | Tp57577_TGAC_v2_scaf_503 | 4 | CH_tpr_360 | 2 | 2 | 0.000756974 |
Vaccinium macrocarpon | chr5_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_142 | 3 | 4 | 0.00000181306 |
Vigna mungo | CM024077.1 | 4 | CH_vmu_35 | 4 | 4 | 0.0000000000566556 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |