Functional clusters

Information

  • Type Gene Ontology
  • Description ribosomal large subunit export from nucleus

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr11 3 CH_acertr_506 2 2 0.00070497
Actinidia chinensis Lachesis_group15 3 CH_ach_272 2 2 0.000814819
Amaranthus hybridus AmaHy_arrow1_Scaffold_8 3 CH_amhyb_156 2 2 0.000252525
Aquilegia oxysepala CHR06 3 CH_aox_26 4 4 0.000000000195007
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 3 CH_arhy_287 3 3 0.000000221838
Amborella trichopoda AmTr_v1.0_scaffold00049 3 CH_atr_329 2 2 0.000794407
Brassica napus C02 3 CH_bna_96 4 7 0.000000000221557
Brassica oleracea C2 3 CH_bol_152 3 6 0.000000640939
Lupinus albus Lalb_Chr20 3 CH_lal_336 2 2 0.000314895
Medicago truncatula chr4 3 CH_mtr_689 2 2 0.000410863
Nicotiana tabacum Nitab4.5_0000433 3 CH_nta_109 2 3 0.000329164
Petunia axillaris Peaxi162Scf00226 3 CH_pax_297 2 2 0.000422134
Simmondsia chinensis GWHAASQ00000004 3 CH_sci_275 2 2 0.000851426
Sapria himalayana scaffold23_8152026 3 CH_shi_255 2 2 0.000857706
Schrenkiella parvula ch5-6 3 CH_spa_46 3 3 0.0000000929892
Trochodendron aralioides group1 3 CH_tar_459 2 2 0.000600366
Trifolium pratense Tp57577_TGAC_v2_scaf_503 3 CH_tpr_360 2 2 0.000756974
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_142 3 4 0.00000181306
Vigna mungo CM024077.1 3 CH_vmu_35 4 4 0.0000000000566556
Acer truncatum chr11 4 CH_acertr_506 2 2 0.00070497
Actinidia chinensis Lachesis_group15 4 CH_ach_272 2 2 0.000814819
Amaranthus hybridus AmaHy_arrow1_Scaffold_8 4 CH_amhyb_156 2 2 0.000252525
Aquilegia oxysepala CHR06 4 CH_aox_26 4 4 0.000000000195007
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 4 CH_arhy_287 3 3 0.000000221838
Amborella trichopoda AmTr_v1.0_scaffold00049 4 CH_atr_329 2 2 0.000794407
Brassica napus C02 4 CH_bna_96 4 7 0.000000000221557
Brassica oleracea C2 4 CH_bol_152 3 6 0.000000640939
Lupinus albus Lalb_Chr20 4 CH_lal_336 2 2 0.000314895
Medicago truncatula chr4 4 CH_mtr_689 2 2 0.000410863
Nicotiana tabacum Nitab4.5_0000433 4 CH_nta_109 2 3 0.000329164
Petunia axillaris Peaxi162Scf00226 4 CH_pax_297 2 2 0.000422134
Simmondsia chinensis GWHAASQ00000004 4 CH_sci_275 2 2 0.000851426
Sapria himalayana scaffold23_8152026 4 CH_shi_255 2 2 0.000857706
Schrenkiella parvula ch5-6 4 CH_spa_46 3 3 0.0000000929892
Trochodendron aralioides group1 4 CH_tar_459 2 2 0.000600366
Trifolium pratense Tp57577_TGAC_v2_scaf_503 4 CH_tpr_360 2 2 0.000756974
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_142 3 4 0.00000181306
Vigna mungo CM024077.1 4 CH_vmu_35 4 4 0.0000000000566556

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001