Functional clusters

Information

  • Type Gene Ontology
  • Description nuclear export

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Daucus carota DCARv2_Chr1 3 CH_dca_381 2 2 0.000637775
Lonicera japonica GWHAAZE00000007 3 CH_lonja_457 2 2 0.000179662
Quercus lobata 4 3 CH_qlo_930 3 27 0.000408324
Sequoiadendron giganteum chr6 3 CH_sgi_1142 2 2 0.000146145
Solanum pennellii Spenn-ch00 3 CH_spe_415 2 2 0.00044479
Solanum pennellii Spenn-ch01 3 CH_spe_416 2 2 0.00044479
Vanilla planifolia CM028154.1 3 CH_vpl_73 4 24 0.0000000642174
Daucus carota DCARv2_Chr1 4 CH_dca_381 2 2 0.000637775
Lonicera japonica GWHAAZE00000007 4 CH_lonja_457 2 2 0.000179662
Quercus lobata 4 4 CH_qlo_930 3 27 0.000408324
Sequoiadendron giganteum chr6 4 CH_sgi_1142 2 2 0.000146145
Solanum pennellii Spenn-ch00 4 CH_spe_415 2 2 0.00044479
Solanum pennellii Spenn-ch01 4 CH_spe_416 2 2 0.00044479
Vanilla planifolia CM028154.1 4 CH_vpl_73 4 24 0.0000000642174

Available child term results

Ontology identifier Description Number of clusters
GO:0000055 ribosomal large subunit export from nucleus 38
GO:0000056 ribosomal small subunit export from nucleus 22
GO:0006405 RNA export from nucleus 16
GO:0006406 mRNA export from nucleus 4
GO:0006408 snRNA export from nucleus 8
GO:0006409 tRNA export from nucleus 2
GO:0006611 protein export from nucleus 16
GO:0016973 poly(A)+ mRNA export from nucleus 8
GO:0071528 tRNA re-export from nucleus 10

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001