Functional clusters
Information
- Type Gene Ontology
- Description Golgi apparatus
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis thaliana | Chr2 | 3 | CH_ath_373 | 14 | 72 | 0.0000466376 |
Quercus lobata | CM012294 | 3 | CH_qlo_916 | 14 | 77 | 0.00033726 |
Rhododendron simsii | chr08 | 3 | CH_rsi_425 | 6 | 8 | 0.000210377 |
Arabidopsis thaliana | Chr2 | 4 | CH_ath_373 | 14 | 72 | 0.0000466376 |
Quercus lobata | CM012294 | 4 | CH_qlo_916 | 14 | 77 | 0.00033726 |
Rhododendron simsii | chr08 | 4 | CH_rsi_425 | 6 | 8 | 0.000210377 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
GO:0000139 | Golgi membrane | 10 |
GO:0000938 | GARP complex | 30 |
GO:0005795 | Golgi stack | 2 |
GO:0005796 | Golgi lumen | 2 |
GO:0005797 | Golgi medial cisterna | 2 |
GO:0005801 | cis-Golgi network | 10 |
GO:0005802 | trans-Golgi network | 12 |
GO:0017119 | Golgi transport complex | 14 |
GO:0030121 | AP-1 adaptor complex | 4 |
GO:0030126 | COPI vesicle coat | 8 |
GO:0032588 | trans-Golgi network membrane | 2 |
GO:0034066 | Ric1-Rgp1 guanyl-nucleotide exchange factor complex | 18 |
GO:0098791 | Golgi apparatus subcompartment | 2 |
GO:1990071 | TRAPPII protein complex | 16 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |