Functional clusters

Information

  • Type Gene Ontology
  • Description TRAPPII protein complex

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr2 3 CH_acertr_158 3 4 0.000000298174
Amborella trichopoda AmTr_v1.0_scaffold00003 3 CH_atr_333 2 2 0.000794407
Brassica carinata ChrC05 3 CH_bca_889 2 2 0.00059854
Davidia involucrata GWHABJS00000013 3 CH_din_125 3 3 0.00000021011
Eutrema salsugineum scaffold_2 3 CH_esa_242 2 2 0.000456899
Sequoiadendron giganteum chr1 3 CH_sgi_182 5 5 8.87156e-16
Trochodendron aralioides group6 3 CH_tar_406 2 2 0.00036022
Vanilla planifolia CM028159.1 3 CH_vpl_27 4 4 0.0000000000181544
Acer truncatum chr2 4 CH_acertr_158 3 4 0.000000298174
Amborella trichopoda AmTr_v1.0_scaffold00003 4 CH_atr_333 2 2 0.000794407
Brassica carinata ChrC05 4 CH_bca_889 2 2 0.00059854
Davidia involucrata GWHABJS00000013 4 CH_din_125 3 3 0.00000021011
Eutrema salsugineum scaffold_2 4 CH_esa_242 2 2 0.000456899
Sequoiadendron giganteum chr1 4 CH_sgi_182 5 5 8.87156e-16
Trochodendron aralioides group6 4 CH_tar_406 2 2 0.00036022
Vanilla planifolia CM028159.1 4 CH_vpl_27 4 4 0.0000000000181544

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001