Functional clusters

Information

  • Type Gene Ontology
  • Description GARP complex

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group7 3 CH_ach_60 3 3 0.000000531158
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 3 CH_arhy_334 3 3 0.00000109709
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.01 3 CH_arhy_335 3 3 0.00000109709
Amborella trichopoda AmTr_v1.0_scaffold00072 3 CH_atr_335 2 3 0.000794407
Camellia sinensis var. sinensis Contig1196 3 CH_camsi_144 4 5 0.000000000477224
Corylus avellana 2 3 CH_cav_138 3 4 0.000000705324
Lupinus albus Lalb_Chr15 3 CH_lal_128 3 3 0.000000347064
Lonicera japonica GWHAAZE00000001 3 CH_lonja_555 2 2 0.000598874
Petunia axillaris Peaxi162Scf00267 3 CH_pax_343 2 2 0.000703556
Sequoiadendron giganteum chr1 3 CH_sgi_430 4 5 0.000000000858305
Sequoiadendron giganteum chr9 3 CH_sgi_703 3 3 0.000000783163
Sequoiadendron giganteum chr1 3 CH_sgi_704 3 3 0.000000783163
Sapria himalayana scaffold71_2458239 3 CH_shi_11 5 6 0.0000000000000606169
Solanum tuberosum ST4.03ch04 3 CH_stu_390 2 2 0.0000512453
Trochodendron aralioides group9 3 CH_tar_497 2 2 0.000900549
Actinidia chinensis Lachesis_group7 4 CH_ach_60 3 3 0.000000531158
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 4 CH_arhy_334 3 3 0.00000109709
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.01 4 CH_arhy_335 3 3 0.00000109709
Amborella trichopoda AmTr_v1.0_scaffold00072 4 CH_atr_335 2 3 0.000794407
Camellia sinensis var. sinensis Contig1196 4 CH_camsi_144 4 5 0.000000000477224
Corylus avellana 2 4 CH_cav_138 3 4 0.000000705324
Lupinus albus Lalb_Chr15 4 CH_lal_128 3 3 0.000000347064
Lonicera japonica GWHAAZE00000001 4 CH_lonja_555 2 2 0.000598874
Petunia axillaris Peaxi162Scf00267 4 CH_pax_343 2 2 0.000703556
Sequoiadendron giganteum chr1 4 CH_sgi_430 4 5 0.000000000858305
Sequoiadendron giganteum chr9 4 CH_sgi_703 3 3 0.000000783163
Sequoiadendron giganteum chr1 4 CH_sgi_704 3 3 0.000000783163
Sapria himalayana scaffold71_2458239 4 CH_shi_11 5 6 0.0000000000000606169
Solanum tuberosum ST4.03ch04 4 CH_stu_390 2 2 0.0000512453
Trochodendron aralioides group9 4 CH_tar_497 2 2 0.000900549

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001