Functional clusters

Information

  • Type Gene Ontology
  • Description Ric1-Rgp1 guanyl-nucleotide exchange factor complex

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr3 3 CH_camsi_474 3 40 0.0000311356
Ceratophyllum demersum 2 3 CH_cde_109 2 2 0.0000789796
Corchorus olitorius AWUE01014941.1 3 CH_col_92 2 2 0.000292099
Carica papaya supercontig_11 3 CH_cpa_213 2 3 0.000285185
Chenopodium quinoa C_Quinoa_Scaffold_4250 3 CH_cqu_390 2 2 0.000142146
Hydrangea macrophylla Hma1.2p1_0071F.1 3 CH_hma_196 2 2 0.000111086
Rosa chinensis RcHm_v2.0_Chr1 3 CH_rch_753 2 4 0.000717527
Sequoiadendron giganteum chr11 3 CH_sgi_470 3 3 0.00000000355983
Vanilla planifolia CM028155.1 3 CH_vpl_213 2 2 0.000073888
Camellia sinensis var. sinensis Chr3 4 CH_camsi_474 3 40 0.0000311356
Ceratophyllum demersum 2 4 CH_cde_109 2 2 0.0000789796
Corchorus olitorius AWUE01014941.1 4 CH_col_92 2 2 0.000292099
Carica papaya supercontig_11 4 CH_cpa_213 2 3 0.000285185
Chenopodium quinoa C_Quinoa_Scaffold_4250 4 CH_cqu_390 2 2 0.000142146
Hydrangea macrophylla Hma1.2p1_0071F.1 4 CH_hma_196 2 2 0.000111086
Rosa chinensis RcHm_v2.0_Chr1 4 CH_rch_753 2 4 0.000717527
Sequoiadendron giganteum chr11 4 CH_sgi_470 3 3 0.00000000355983
Vanilla planifolia CM028155.1 4 CH_vpl_213 2 2 0.000073888

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001