Functional clusters

Information

  • Type Gene Ontology
  • Description vacuole

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-6 3 CH_aar_124 13 38 0.0000149721
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.02 3 CH_arhy_681 8 18 0.000783995
Cardamine hirsuta Chr7 3 CH_chi_252 7 10 0.000114722
Eucalyptus grandis Chr11 3 CH_egr_445 11 19 0.000000120575
Eucalyptus grandis Chr06 3 CH_egr_620 17 77 0.0000202067
Malus domestica Chr03 3 CH_mdo_685 11 44 0.000734614
Medicago truncatula chr4 3 CH_mtr_749 8 23 0.000835065
Salix brachista GWHAAZH00000016 3 CH_sbr_222 6 6 0.0000422182
Aethionema arabicum LG-6 4 CH_aar_124 13 38 0.0000149721
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.02 4 CH_arhy_681 8 18 0.000783995
Cardamine hirsuta Chr7 4 CH_chi_252 7 10 0.000114722
Eucalyptus grandis Chr11 4 CH_egr_445 11 19 0.000000120575
Eucalyptus grandis Chr06 4 CH_egr_620 17 77 0.0000202067
Malus domestica Chr03 4 CH_mdo_685 11 44 0.000734614
Medicago truncatula chr4 4 CH_mtr_749 8 23 0.000835065
Salix brachista GWHAAZH00000016 4 CH_sbr_222 6 6 0.0000422182

Available child term results

Ontology identifier Description Number of clusters
GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain 34
GO:0000306 extrinsic component of vacuolar membrane 4
GO:0000326 protein storage vacuole 22
GO:0000327 lytic vacuole within protein storage vacuole 12
GO:0000421 autophagosome membrane 4
GO:0005764 lysosome 4
GO:0005774 vacuolar membrane 14
GO:0005775 vacuolar lumen 8
GO:0010282 senescence-associated vacuole 42
GO:0016471 vacuolar proton-transporting V-type ATPase complex 4
GO:0032586 protein storage vacuole membrane 2
GO:0042807 central vacuole 8
GO:0070772 PAS complex 16

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001