Functional clusters
Information
- Type Gene Ontology
- Description protein storage vacuole
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Davidia involucrata | GWHABJS00000002 | 3 | CH_din_72 | 5 | 8 | 0.000000000622586 |
| Eucalyptus grandis | Chr04 | 3 | CH_egr_444 | 4 | 6 | 0.000000114016 |
| Erythranthe guttata | scaffold_14 | 3 | CH_egut_105 | 5 | 8 | 0.00000000115805 |
| Lonicera japonica | GWHAAZE00000007 | 3 | CH_lonja_5 | 20 | 42 | 4.39416e-44 |
| Lactuca sativa | Lsat_1_v8_lg_6 | 3 | CH_lsa_68 | 8 | 44 | 0.00000000000121994 |
| Medicago truncatula | chr4 | 3 | CH_mtr_174 | 6 | 31 | 0.000000000340535 |
| Nelumbo nucifera | chr5 | 3 | CH_nnu_149 | 4 | 12 | 0.00000676012 |
| Quercus lobata | 4 | 3 | CH_qlo_851 | 3 | 7 | 0.000185848 |
| Salvia bowleyana | GWHASIU00000005 | 3 | CH_sbo_77 | 7 | 27 | 0.000000000000546448 |
| Tripterygium wilfordii | NC_052243.1 | 3 | CH_twi_172 | 3 | 3 | 0.0000121383 |
| Vaccinium macrocarpon | chr4_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_179 | 3 | 3 | 0.0000229395 |
| Davidia involucrata | GWHABJS00000002 | 4 | CH_din_72 | 5 | 8 | 0.000000000622586 |
| Eucalyptus grandis | Chr04 | 4 | CH_egr_444 | 4 | 6 | 0.000000114016 |
| Erythranthe guttata | scaffold_14 | 4 | CH_egut_105 | 5 | 8 | 0.00000000115805 |
| Lonicera japonica | GWHAAZE00000007 | 4 | CH_lonja_5 | 20 | 42 | 4.39416e-44 |
| Lactuca sativa | Lsat_1_v8_lg_6 | 4 | CH_lsa_68 | 8 | 44 | 0.00000000000121994 |
| Medicago truncatula | chr4 | 4 | CH_mtr_174 | 6 | 31 | 0.000000000340535 |
| Nelumbo nucifera | chr5 | 4 | CH_nnu_149 | 4 | 12 | 0.00000676012 |
| Quercus lobata | 4 | 4 | CH_qlo_851 | 3 | 7 | 0.000185848 |
| Salvia bowleyana | GWHASIU00000005 | 4 | CH_sbo_77 | 7 | 27 | 0.000000000000546448 |
| Tripterygium wilfordii | NC_052243.1 | 4 | CH_twi_172 | 3 | 3 | 0.0000121383 |
| Vaccinium macrocarpon | chr4_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_179 | 3 | 3 | 0.0000229395 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0000327 | lytic vacuole within protein storage vacuole | 12 |
| GO:0032586 | protein storage vacuole membrane | 2 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |