Functional clusters
Information
- Type Gene Ontology
- Description senescence-associated vacuole
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aquilegia oxysepala | CHR02 | 3 | CH_aox_75 | 3 | 3 | 0.0000000964818 |
| Camellia sinensis var. sinensis | Chr8 | 3 | CH_camsi_773 | 3 | 39 | 0.000574954 |
| Cannabis sativa | NC_044377.1 | 3 | CH_cansat_127 | 3 | 5 | 0.000000258686 |
| Cicer arietinum L. | Ca_LG6_v3 | 3 | CH_car_25 | 3 | 4 | 0.0000000363451 |
| Carica papaya | supercontig_103 | 3 | CH_cpa_43 | 3 | 3 | 0.000000013557 |
| Eucalyptus grandis | Chr04 | 3 | CH_egr_10 | 12 | 13 | 8.40606e-41 |
| Erythranthe guttata | scaffold_11 | 3 | CH_egut_221 | 3 | 8 | 0.00000890237 |
| Helianthus annuus | HanXRQChr17 | 3 | CH_han_4 | 10 | 12 | 5.93553e-33 |
| Hydrangea macrophylla | Hma1.2p1_0178F.1 | 3 | CH_hma_11 | 8 | 79 | 0.00000000000000171073 |
| Lotus japonicus | chr3 | 3 | CH_lja_7 | 8 | 11 | 4.97216e-25 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 3 | CH_lsa_366 | 2 | 3 | 0.000154198 |
| Manihot esculenta | Chromosome01 | 3 | CH_mes_325 | 2 | 2 | 0.000183189 |
| Olea europaea | chr21 | 3 | CH_oeu_8 | 6 | 11 | 1.26121e-16 |
| Pisum sativum | chr4LG4 | 3 | CH_psa_369 | 2 | 6 | 0.000782371 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 3 | CH_rch_222 | 3 | 4 | 0.00000000953543 |
| Salvia bowleyana | GWHASIU00000005 | 3 | CH_sbo_503 | 3 | 77 | 0.000905898 |
| Trochodendron aralioides | group6 | 3 | CH_tar_326 | 2 | 3 | 0.000180104 |
| Theobroma cacao | Chromosome_1 | 3 | CH_tca_316 | 2 | 3 | 0.000219708 |
| Vanilla planifolia | CM028150.1 | 3 | CH_vpl_55 | 3 | 3 | 0.00000000818945 |
| Vitis vinifera | chr12 | 3 | CH_vvi_80 | 4 | 6 | 0.0000000000198038 |
| Zea mays | 6 | 3 | CH_zma_359 | 2 | 3 | 0.000920308 |
| Aquilegia oxysepala | CHR02 | 4 | CH_aox_75 | 3 | 3 | 0.0000000964818 |
| Camellia sinensis var. sinensis | Chr8 | 4 | CH_camsi_773 | 3 | 39 | 0.000574954 |
| Cannabis sativa | NC_044377.1 | 4 | CH_cansat_127 | 3 | 5 | 0.000000258686 |
| Cicer arietinum L. | Ca_LG6_v3 | 4 | CH_car_25 | 3 | 4 | 0.0000000363451 |
| Carica papaya | supercontig_103 | 4 | CH_cpa_43 | 3 | 3 | 0.000000013557 |
| Eucalyptus grandis | Chr04 | 4 | CH_egr_10 | 12 | 13 | 8.40606e-41 |
| Erythranthe guttata | scaffold_11 | 4 | CH_egut_221 | 3 | 8 | 0.00000890237 |
| Helianthus annuus | HanXRQChr17 | 4 | CH_han_4 | 10 | 12 | 5.93553e-33 |
| Hydrangea macrophylla | Hma1.2p1_0178F.1 | 4 | CH_hma_11 | 8 | 79 | 0.00000000000000171073 |
| Lotus japonicus | chr3 | 4 | CH_lja_7 | 8 | 11 | 4.97216e-25 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 4 | CH_lsa_366 | 2 | 3 | 0.000154198 |
| Manihot esculenta | Chromosome01 | 4 | CH_mes_325 | 2 | 2 | 0.000183189 |
| Olea europaea | chr21 | 4 | CH_oeu_8 | 6 | 11 | 1.26121e-16 |
| Pisum sativum | chr4LG4 | 4 | CH_psa_369 | 2 | 6 | 0.000782371 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 4 | CH_rch_222 | 3 | 4 | 0.00000000953543 |
| Salvia bowleyana | GWHASIU00000005 | 4 | CH_sbo_503 | 3 | 77 | 0.000905898 |
| Trochodendron aralioides | group6 | 4 | CH_tar_326 | 2 | 3 | 0.000180104 |
| Theobroma cacao | Chromosome_1 | 4 | CH_tca_316 | 2 | 3 | 0.000219708 |
| Vanilla planifolia | CM028150.1 | 4 | CH_vpl_55 | 3 | 3 | 0.00000000818945 |
| Vitis vinifera | chr12 | 4 | CH_vvi_80 | 4 | 6 | 0.0000000000198038 |
| Zea mays | 6 | 4 | CH_zma_359 | 2 | 3 | 0.000920308 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |