Functional clusters

Information

  • Type Gene Ontology
  • Description mitochondrion

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-3 3 CH_aar_104 20 80 0.00000252564
Arabidopsis thaliana ChrM 3 CH_ath_11 30 32 1.50554e-28
Arabidopsis thaliana Chr2 3 CH_ath_115 22 50 0.00000000774906
Arabidopsis thaliana ChrM 3 CH_ath_12 30 32 1.50554e-28
Arabidopsis thaliana Chr1 3 CH_ath_389 21 65 0.0000648172
Arabidopsis thaliana Chr2 3 CH_ath_46 30 69 0.000000000000826
Arabidopsis thaliana ChrM 3 CH_ath_8 30 30 3.4663e-31
Arabidopsis thaliana ChrM 3 CH_ath_9 30 31 1.00554e-29
Cannabis sativa NC_029855.1 3 CH_cansat_6 30 55 1.41367e-28
Chenopodium quinoa C_Quinoa_Scaffold_3086 3 CH_cqu_509 8 14 0.000630512
Daucus carota DCARv2_MT 3 CH_dca_4 30 30 1.61754e-39
Eucalyptus grandis Chr04 3 CH_egr_570 15 57 0.00000397535
Eucalyptus grandis Chr02 3 CH_egr_741 13 52 0.000137797
Lupinus albus Lalb_Chr00c24 3 CH_lal_2 29 29 2.38008e-36
Lupinus albus Lalb_Chr00c21 3 CH_lal_3 30 33 4.68533e-34
Lupinus albus Lalb_Chr00c29 3 CH_lal_5 28 32 1.78966e-30
Lotus japonicus chr2 3 CH_lja_296 9 19 0.000300215
Quercus lobata 5 3 CH_qlo_996 11 39 0.000675027
Sequoiadendron giganteum chr2 3 CH_sgi_276 11 12 0.000000000000632146
Solanum pennellii Spenn-ch04 3 CH_spe_390 5 5 0.000290576
Aethionema arabicum LG-3 4 CH_aar_104 20 80 0.00000252564
Arabidopsis thaliana ChrM 4 CH_ath_11 30 32 1.50554e-28
Arabidopsis thaliana Chr2 4 CH_ath_115 22 50 0.00000000774906
Arabidopsis thaliana ChrM 4 CH_ath_12 30 32 1.50554e-28
Arabidopsis thaliana Chr1 4 CH_ath_389 21 65 0.0000648172
Arabidopsis thaliana Chr2 4 CH_ath_46 30 69 0.000000000000826
Arabidopsis thaliana ChrM 4 CH_ath_8 30 30 3.4663e-31
Arabidopsis thaliana ChrM 4 CH_ath_9 30 31 1.00554e-29
Cannabis sativa NC_029855.1 4 CH_cansat_6 30 55 1.41367e-28
Chenopodium quinoa C_Quinoa_Scaffold_3086 4 CH_cqu_509 8 14 0.000630512
Daucus carota DCARv2_MT 4 CH_dca_4 30 30 1.61754e-39
Eucalyptus grandis Chr04 4 CH_egr_570 15 57 0.00000397535
Eucalyptus grandis Chr02 4 CH_egr_741 13 52 0.000137797
Lupinus albus Lalb_Chr00c24 4 CH_lal_2 29 29 2.38008e-36
Lupinus albus Lalb_Chr00c21 4 CH_lal_3 30 33 4.68533e-34
Lupinus albus Lalb_Chr00c29 4 CH_lal_5 28 32 1.78966e-30
Lotus japonicus chr2 4 CH_lja_296 9 19 0.000300215
Quercus lobata 5 4 CH_qlo_996 11 39 0.000675027
Sequoiadendron giganteum chr2 4 CH_sgi_276 11 12 0.000000000000632146
Solanum pennellii Spenn-ch04 4 CH_spe_390 5 5 0.000290576

Available child term results

Ontology identifier Description Number of clusters
GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) 20
GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) 22
GO:0005740 mitochondrial envelope 2
GO:0005741 mitochondrial outer membrane 2
GO:0005742 mitochondrial outer membrane translocase complex 8
GO:0005743 mitochondrial inner membrane 16
GO:0005744 TIM23 mitochondrial import inner membrane translocase complex 12
GO:0005747 mitochondrial respiratory chain complex I 6
GO:0005749 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) 2
GO:0005750 mitochondrial respiratory chain complex III 2
GO:0005753 mitochondrial proton-transporting ATP synthase complex 2
GO:0005754 mitochondrial proton-transporting ATP synthase, catalytic core 6
GO:0005758 mitochondrial intermembrane space 2
GO:0005759 mitochondrial matrix 30
GO:0005761 mitochondrial ribosome 2
GO:0005762 mitochondrial large ribosomal subunit 8
GO:0005763 mitochondrial small ribosomal subunit 14
GO:0031304 intrinsic component of mitochondrial inner membrane 2
GO:0031307 integral component of mitochondrial outer membrane 6
GO:0031314 extrinsic component of mitochondrial inner membrane 52
GO:0031966 mitochondrial membrane 4
GO:0032592 integral component of mitochondrial membrane 4
GO:0034245 mitochondrial DNA-directed RNA polymerase complex 2
GO:0042720 mitochondrial inner membrane peptidase complex 8
GO:0042721 TIM22 mitochondrial import inner membrane insertion complex 20
GO:0045025 mitochondrial degradosome 2
GO:0098798 mitochondrial protein-containing complex 64
GO:0098800 inner mitochondrial membrane protein complex 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001