Functional clusters
Information
- Type Gene Ontology
- Description mitochondrion
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Aethionema arabicum | LG-3 | 3 | CH_aar_104 | 20 | 80 | 0.00000252564 |
Arabidopsis thaliana | ChrM | 3 | CH_ath_11 | 30 | 32 | 1.50554e-28 |
Arabidopsis thaliana | Chr2 | 3 | CH_ath_115 | 22 | 50 | 0.00000000774906 |
Arabidopsis thaliana | ChrM | 3 | CH_ath_12 | 30 | 32 | 1.50554e-28 |
Arabidopsis thaliana | Chr1 | 3 | CH_ath_389 | 21 | 65 | 0.0000648172 |
Arabidopsis thaliana | Chr2 | 3 | CH_ath_46 | 30 | 69 | 0.000000000000826 |
Arabidopsis thaliana | ChrM | 3 | CH_ath_8 | 30 | 30 | 3.4663e-31 |
Arabidopsis thaliana | ChrM | 3 | CH_ath_9 | 30 | 31 | 1.00554e-29 |
Cannabis sativa | NC_029855.1 | 3 | CH_cansat_6 | 30 | 55 | 1.41367e-28 |
Chenopodium quinoa | C_Quinoa_Scaffold_3086 | 3 | CH_cqu_509 | 8 | 14 | 0.000630512 |
Daucus carota | DCARv2_MT | 3 | CH_dca_4 | 30 | 30 | 1.61754e-39 |
Eucalyptus grandis | Chr04 | 3 | CH_egr_570 | 15 | 57 | 0.00000397535 |
Eucalyptus grandis | Chr02 | 3 | CH_egr_741 | 13 | 52 | 0.000137797 |
Lupinus albus | Lalb_Chr00c24 | 3 | CH_lal_2 | 29 | 29 | 2.38008e-36 |
Lupinus albus | Lalb_Chr00c21 | 3 | CH_lal_3 | 30 | 33 | 4.68533e-34 |
Lupinus albus | Lalb_Chr00c29 | 3 | CH_lal_5 | 28 | 32 | 1.78966e-30 |
Lotus japonicus | chr2 | 3 | CH_lja_296 | 9 | 19 | 0.000300215 |
Quercus lobata | 5 | 3 | CH_qlo_996 | 11 | 39 | 0.000675027 |
Sequoiadendron giganteum | chr2 | 3 | CH_sgi_276 | 11 | 12 | 0.000000000000632146 |
Solanum pennellii | Spenn-ch04 | 3 | CH_spe_390 | 5 | 5 | 0.000290576 |
Aethionema arabicum | LG-3 | 4 | CH_aar_104 | 20 | 80 | 0.00000252564 |
Arabidopsis thaliana | ChrM | 4 | CH_ath_11 | 30 | 32 | 1.50554e-28 |
Arabidopsis thaliana | Chr2 | 4 | CH_ath_115 | 22 | 50 | 0.00000000774906 |
Arabidopsis thaliana | ChrM | 4 | CH_ath_12 | 30 | 32 | 1.50554e-28 |
Arabidopsis thaliana | Chr1 | 4 | CH_ath_389 | 21 | 65 | 0.0000648172 |
Arabidopsis thaliana | Chr2 | 4 | CH_ath_46 | 30 | 69 | 0.000000000000826 |
Arabidopsis thaliana | ChrM | 4 | CH_ath_8 | 30 | 30 | 3.4663e-31 |
Arabidopsis thaliana | ChrM | 4 | CH_ath_9 | 30 | 31 | 1.00554e-29 |
Cannabis sativa | NC_029855.1 | 4 | CH_cansat_6 | 30 | 55 | 1.41367e-28 |
Chenopodium quinoa | C_Quinoa_Scaffold_3086 | 4 | CH_cqu_509 | 8 | 14 | 0.000630512 |
Daucus carota | DCARv2_MT | 4 | CH_dca_4 | 30 | 30 | 1.61754e-39 |
Eucalyptus grandis | Chr04 | 4 | CH_egr_570 | 15 | 57 | 0.00000397535 |
Eucalyptus grandis | Chr02 | 4 | CH_egr_741 | 13 | 52 | 0.000137797 |
Lupinus albus | Lalb_Chr00c24 | 4 | CH_lal_2 | 29 | 29 | 2.38008e-36 |
Lupinus albus | Lalb_Chr00c21 | 4 | CH_lal_3 | 30 | 33 | 4.68533e-34 |
Lupinus albus | Lalb_Chr00c29 | 4 | CH_lal_5 | 28 | 32 | 1.78966e-30 |
Lotus japonicus | chr2 | 4 | CH_lja_296 | 9 | 19 | 0.000300215 |
Quercus lobata | 5 | 4 | CH_qlo_996 | 11 | 39 | 0.000675027 |
Sequoiadendron giganteum | chr2 | 4 | CH_sgi_276 | 11 | 12 | 0.000000000000632146 |
Solanum pennellii | Spenn-ch04 | 4 | CH_spe_390 | 5 | 5 | 0.000290576 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
GO:0000275 | mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) | 20 |
GO:0000276 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) | 22 |
GO:0005740 | mitochondrial envelope | 2 |
GO:0005741 | mitochondrial outer membrane | 2 |
GO:0005742 | mitochondrial outer membrane translocase complex | 8 |
GO:0005743 | mitochondrial inner membrane | 16 |
GO:0005744 | TIM23 mitochondrial import inner membrane translocase complex | 12 |
GO:0005747 | mitochondrial respiratory chain complex I | 6 |
GO:0005749 | mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) | 2 |
GO:0005750 | mitochondrial respiratory chain complex III | 2 |
GO:0005753 | mitochondrial proton-transporting ATP synthase complex | 2 |
GO:0005754 | mitochondrial proton-transporting ATP synthase, catalytic core | 6 |
GO:0005758 | mitochondrial intermembrane space | 2 |
GO:0005759 | mitochondrial matrix | 30 |
GO:0005761 | mitochondrial ribosome | 2 |
GO:0005762 | mitochondrial large ribosomal subunit | 8 |
GO:0005763 | mitochondrial small ribosomal subunit | 14 |
GO:0031304 | intrinsic component of mitochondrial inner membrane | 2 |
GO:0031307 | integral component of mitochondrial outer membrane | 6 |
GO:0031314 | extrinsic component of mitochondrial inner membrane | 52 |
GO:0031966 | mitochondrial membrane | 4 |
GO:0032592 | integral component of mitochondrial membrane | 4 |
GO:0034245 | mitochondrial DNA-directed RNA polymerase complex | 2 |
GO:0042720 | mitochondrial inner membrane peptidase complex | 8 |
GO:0042721 | TIM22 mitochondrial import inner membrane insertion complex | 20 |
GO:0045025 | mitochondrial degradosome | 2 |
GO:0098798 | mitochondrial protein-containing complex | 64 |
GO:0098800 | inner mitochondrial membrane protein complex | 4 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |