Functional clusters

Information

  • Type Gene Ontology
  • Description mitochondrial protein-containing complex

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Contig02084 3 CH_ach_218 6 37 0.000468855
Amaranthus hybridus AmaHy_arrow1_Scaffold_2 3 CH_amhyb_221 4 7 0.000946872
Aquilegia oxysepala SUPER_12 3 CH_aox_41 8 22 0.00000000112217
Arachis hypogaea arahy.Tifrunner.gnm1.scaffold_22 3 CH_arhy_114 14 80 0.000000000000151921
Arachis hypogaea arahy.Tifrunner.gnm1.scaffold_22 3 CH_arhy_91 15 72 4.74432e-16
Brassica napus A04 3 CH_bna_42 11 27 0.0000000000000153779
Brassica oleracea Boleracea_scaffold_28 3 CH_bol_8 20 76 2.97893e-25
Brassica rapa Brapa_scaffold_48 3 CH_bra_13 16 77 2.16249e-16
Brassica rapa Brapa_scaffold_48 3 CH_bra_19 15 76 0.00000000000000864719
Brassica rapa Brapa_scaffold_77 3 CH_bra_191 7 41 0.000127768
Ceratophyllum demersum 1 3 CH_cde_9 14 80 0.00000000000183376
Cardamine hirsuta ChrM 3 CH_chi_100 10 64 0.0000000311156
Chenopodium quinoa C_Quinoa_Scaffold_3525 3 CH_cqu_78 9 26 0.0000000000850675
Davidia involucrata GWHABJS00000230 3 CH_din_33 13 74 0.0000000000000714089
Eutrema salsugineum scaffold_11 3 CH_esa_118 6 15 0.00000584055
Gossypium raimondii Chr01 3 CH_gra_27 15 63 4.84131e-16
Helianthus annuus HanXRQMT 3 CH_han_31 15 42 5.39897e-20
Lotus japonicus Contig00315 3 CH_lja_10 14 29 6.46111e-21
Lonicera japonica GWHAAZE00000002 3 CH_lonja_17 22 73 3.01768e-33
Magnolia biondii Chr05 3 CH_mbi_153 7 22 0.0000000101123
Medicago truncatula scaffold0082 3 CH_mtr_436 5 13 0.0000149065
Nelumbo nucifera chr1 3 CH_nnu_19 15 77 0.00000000000000133968
Nelumbo nucifera chr1 3 CH_nnu_24 12 42 0.0000000000000509776
Nelumbo nucifera chr1 3 CH_nnu_62 11 79 0.00000000770593
Punica granatum NW_022204095.1 3 CH_pgr_90 8 20 0.000000000457128
Rosa chinensis RcHm_v2.0_MT 3 CH_rch_20 19 73 2.65169e-27
Rhododendron simsii Mt 3 CH_rsi_68 12 44 0.00000000000000466127
Salvia bowleyana GWHASIU00000001 3 CH_sbo_16 19 54 6.43522e-30
Salix brachista GWHAAZH00000020 3 CH_sbr_31 14 73 0.0000000000000360501
Solanum lycopersicum SL4.0ch00 3 CH_sly_48 17 78 0.00000000000000169782
Schrenkiella parvula ch3-4 3 CH_spa_6 12 41 0.0000000000000592977
Utricularia gibba unitig_87 3 CH_ugi_7 16 75 1.56089e-17
Actinidia chinensis Contig02084 4 CH_ach_218 6 37 0.000468855
Amaranthus hybridus AmaHy_arrow1_Scaffold_2 4 CH_amhyb_221 4 7 0.000946872
Aquilegia oxysepala SUPER_12 4 CH_aox_41 8 22 0.00000000112217
Arachis hypogaea arahy.Tifrunner.gnm1.scaffold_22 4 CH_arhy_114 14 80 0.000000000000151921
Arachis hypogaea arahy.Tifrunner.gnm1.scaffold_22 4 CH_arhy_91 15 72 4.74432e-16
Brassica napus A04 4 CH_bna_42 11 27 0.0000000000000153779
Brassica oleracea Boleracea_scaffold_28 4 CH_bol_8 20 76 2.97893e-25
Brassica rapa Brapa_scaffold_48 4 CH_bra_13 16 77 2.16249e-16
Brassica rapa Brapa_scaffold_48 4 CH_bra_19 15 76 0.00000000000000864719
Brassica rapa Brapa_scaffold_77 4 CH_bra_191 7 41 0.000127768
Ceratophyllum demersum 1 4 CH_cde_9 14 80 0.00000000000183376
Cardamine hirsuta ChrM 4 CH_chi_100 10 64 0.0000000311156
Chenopodium quinoa C_Quinoa_Scaffold_3525 4 CH_cqu_78 9 26 0.0000000000850675
Davidia involucrata GWHABJS00000230 4 CH_din_33 13 74 0.0000000000000714089
Eutrema salsugineum scaffold_11 4 CH_esa_118 6 15 0.00000584055
Gossypium raimondii Chr01 4 CH_gra_27 15 63 4.84131e-16
Helianthus annuus HanXRQMT 4 CH_han_31 15 42 5.39897e-20
Lotus japonicus Contig00315 4 CH_lja_10 14 29 6.46111e-21
Lonicera japonica GWHAAZE00000002 4 CH_lonja_17 22 73 3.01768e-33
Magnolia biondii Chr05 4 CH_mbi_153 7 22 0.0000000101123
Medicago truncatula scaffold0082 4 CH_mtr_436 5 13 0.0000149065
Nelumbo nucifera chr1 4 CH_nnu_19 15 77 0.00000000000000133968
Nelumbo nucifera chr1 4 CH_nnu_24 12 42 0.0000000000000509776
Nelumbo nucifera chr1 4 CH_nnu_62 11 79 0.00000000770593
Punica granatum NW_022204095.1 4 CH_pgr_90 8 20 0.000000000457128
Rosa chinensis RcHm_v2.0_MT 4 CH_rch_20 19 73 2.65169e-27
Rhododendron simsii Mt 4 CH_rsi_68 12 44 0.00000000000000466127
Salvia bowleyana GWHASIU00000001 4 CH_sbo_16 19 54 6.43522e-30
Salix brachista GWHAAZH00000020 4 CH_sbr_31 14 73 0.0000000000000360501
Solanum lycopersicum SL4.0ch00 4 CH_sly_48 17 78 0.00000000000000169782
Schrenkiella parvula ch3-4 4 CH_spa_6 12 41 0.0000000000000592977
Utricularia gibba unitig_87 4 CH_ugi_7 16 75 1.56089e-17

Available child term results

Ontology identifier Description Number of clusters
GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) 20
GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) 22
GO:0005742 mitochondrial outer membrane translocase complex 8
GO:0005744 TIM23 mitochondrial import inner membrane translocase complex 12
GO:0005747 mitochondrial respiratory chain complex I 6
GO:0005749 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) 2
GO:0005750 mitochondrial respiratory chain complex III 2
GO:0005753 mitochondrial proton-transporting ATP synthase complex 2
GO:0005754 mitochondrial proton-transporting ATP synthase, catalytic core 6
GO:0005762 mitochondrial large ribosomal subunit 8
GO:0005763 mitochondrial small ribosomal subunit 14
GO:0034245 mitochondrial DNA-directed RNA polymerase complex 2
GO:0042720 mitochondrial inner membrane peptidase complex 8
GO:0042721 TIM22 mitochondrial import inner membrane insertion complex 20
GO:0045025 mitochondrial degradosome 2
GO:0098800 inner mitochondrial membrane protein complex 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001