Functional clusters
Information
- Type MapMan
- Description Enzyme classification.EC_3 hydrolases
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Acer truncatum | chr3 | 1 | CH_acertr_377 | 5 | 10 | 0.000198586 |
Actinidia chinensis | Lachesis_group27 | 1 | CH_ach_108 | 6 | 18 | 0.000149071 |
Citrullus lanatus | CG_Chr03 | 1 | CH_cla_207 | 4 | 5 | 0.000535761 |
Carica papaya | supercontig_103 | 1 | CH_cpa_79 | 6 | 10 | 0.000000492059 |
Lonicera japonica | GWHAAZE00000005 | 1 | CH_lonja_502 | 6 | 16 | 0.000214872 |
Salvia bowleyana | GWHASIU00000002 | 1 | CH_sbo_174 | 5 | 6 | 0.000000608369 |
Salvia bowleyana | GWHASIU00000002 | 1 | CH_sbo_76 | 12 | 73 | 0.0000000000606828 |
Sequoiadendron giganteum | chr5 | 1 | CH_sgi_673 | 6 | 12 | 0.000011227 |
Vitis vinifera | chr9 | 1 | CH_vvi_213 | 9 | 43 | 0.00000382464 |
Zea mays | 5 | 1 | CH_zma_111 | 6 | 11 | 0.00000396817 |
Acer truncatum | chr3 | 2 | CH_acertr_377 | 5 | 10 | 0.000198586 |
Actinidia chinensis | Lachesis_group27 | 2 | CH_ach_108 | 6 | 18 | 0.000149071 |
Citrullus lanatus | CG_Chr03 | 2 | CH_cla_207 | 4 | 5 | 0.000535761 |
Carica papaya | supercontig_103 | 2 | CH_cpa_79 | 6 | 10 | 0.000000492059 |
Lonicera japonica | GWHAAZE00000005 | 2 | CH_lonja_502 | 6 | 16 | 0.000214872 |
Salvia bowleyana | GWHASIU00000002 | 2 | CH_sbo_174 | 5 | 6 | 0.000000608369 |
Salvia bowleyana | GWHASIU00000002 | 2 | CH_sbo_76 | 12 | 73 | 0.0000000000606828 |
Sequoiadendron giganteum | chr5 | 2 | CH_sgi_673 | 6 | 12 | 0.000011227 |
Vitis vinifera | chr9 | 2 | CH_vvi_213 | 9 | 43 | 0.00000382464 |
Zea mays | 5 | 2 | CH_zma_111 | 6 | 11 | 0.00000396817 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
50.3.1 | Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase acting on ester bond | 95 |
50.3.2 | Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase | 746 |
50.3.3 | Enzyme classification.EC_3 hydrolases.EC_3.3 hydrolase acting on ether bond | 2 |
50.3.4 | Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase acting on peptide bond (peptidase) | 112 |
50.3.5 | Enzyme classification.EC_3 hydrolases.EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond | 28 |
50.3.6 | Enzyme classification.EC_3 hydrolases.EC_3.6 hydrolase acting on acid anhydride | 46 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |