Functional clusters
Information
- Type MapMan
- Description Enzyme classification.EC_3 hydrolases.EC_3.6 hydrolase acting on acid anhydride
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.06 | 1 | CH_arhy_546 | 3 | 5 | 0.000263231 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.16 | 1 | CH_arhy_657 | 3 | 6 | 0.000526177 |
| Amborella trichopoda | AmTr_v1.0_scaffold00062 | 1 | CH_atr_151 | 3 | 4 | 0.0000582791 |
| Beta vulgaris | Chr9_EL10_PGA_scaffold8 | 1 | CH_bvu_135 | 3 | 3 | 0.00000996339 |
| Camellia sinensis var. sinensis | Chr11 | 1 | CH_camsi_691 | 3 | 7 | 0.00022309 |
| Coffea canephora | chr9 | 1 | CH_ccan_273 | 3 | 34 | 0.000228381 |
| Citrus clementina | scaffold_9 | 1 | CH_ccl_231 | 3 | 3 | 0.0000115072 |
| Ceratophyllum demersum | 6 | 1 | CH_cde_258 | 5 | 71 | 0.000608656 |
| Glycine max | Gm16 | 1 | CH_gma_185 | 4 | 6 | 0.000000333632 |
| Helianthus annuus | HanXRQChr02 | 1 | CH_han_626 | 3 | 7 | 0.000351801 |
| Magnolia biondii | Chr03 | 1 | CH_mbi_268 | 3 | 4 | 0.0000096209 |
| Malus domestica | Chr04 | 1 | CH_mdo_530 | 3 | 6 | 0.000213704 |
| Medicago truncatula | chr7 | 1 | CH_mtr_169 | 5 | 9 | 0.00000000021708 |
| Oryza sativa ssp. japonica | chr11 | 1 | CH_osa_244 | 4 | 26 | 0.000133699 |
| Petunia axillaris | Peaxi162Scf00378 | 1 | CH_pax_166 | 3 | 4 | 0.0000338422 |
| Papaver somniferum | NC_039358.1 | 1 | CH_pso_418 | 3 | 5 | 0.0000497765 |
| Phaseolus vulgaris | Chr09 | 1 | CH_pvu_235 | 3 | 3 | 0.0000210539 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 1 | CH_rch_395 | 3 | 3 | 0.00000482502 |
| Salvia bowleyana | GWHASIU00000003 | 1 | CH_sbo_236 | 4 | 24 | 0.0000178515 |
| Solanum lycopersicum | SL4.0ch02 | 1 | CH_sly_443 | 3 | 5 | 0.000231986 |
| Trifolium pratense | Tp57577_TGAC_v2_LG6 | 1 | CH_tpr_273 | 3 | 6 | 0.000140083 |
| Vigna mungo | CM024072.1 | 1 | CH_vmu_315 | 3 | 6 | 0.000287595 |
| Vanilla planifolia | CM028159.1 | 1 | CH_vpl_118 | 5 | 41 | 0.0000193499 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.06 | 2 | CH_arhy_546 | 3 | 5 | 0.000263231 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.16 | 2 | CH_arhy_657 | 3 | 6 | 0.000526177 |
| Amborella trichopoda | AmTr_v1.0_scaffold00062 | 2 | CH_atr_151 | 3 | 4 | 0.0000582791 |
| Beta vulgaris | Chr9_EL10_PGA_scaffold8 | 2 | CH_bvu_135 | 3 | 3 | 0.00000996339 |
| Camellia sinensis var. sinensis | Chr11 | 2 | CH_camsi_691 | 3 | 7 | 0.00022309 |
| Coffea canephora | chr9 | 2 | CH_ccan_273 | 3 | 34 | 0.000228381 |
| Citrus clementina | scaffold_9 | 2 | CH_ccl_231 | 3 | 3 | 0.0000115072 |
| Ceratophyllum demersum | 6 | 2 | CH_cde_258 | 5 | 71 | 0.000608656 |
| Eucalyptus grandis | Chr11 | 2 | CH_egr_586 | 3 | 3 | 0.00000791305 |
| Glycine max | Gm16 | 2 | CH_gma_185 | 4 | 6 | 0.000000333632 |
| Helianthus annuus | HanXRQChr02 | 2 | CH_han_626 | 3 | 7 | 0.000351801 |
| Magnolia biondii | Chr03 | 2 | CH_mbi_268 | 3 | 4 | 0.0000096209 |
| Malus domestica | Chr04 | 2 | CH_mdo_530 | 3 | 6 | 0.000213704 |
| Oryza sativa ssp. japonica | chr11 | 2 | CH_osa_244 | 4 | 26 | 0.000133699 |
| Petunia axillaris | Peaxi162Scf00378 | 2 | CH_pax_166 | 3 | 4 | 0.0000338422 |
| Papaver somniferum | NC_039358.1 | 2 | CH_pso_418 | 3 | 5 | 0.0000497765 |
| Phaseolus vulgaris | Chr09 | 2 | CH_pvu_235 | 3 | 3 | 0.0000210539 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 2 | CH_rch_395 | 3 | 3 | 0.00000482502 |
| Salvia bowleyana | GWHASIU00000003 | 2 | CH_sbo_236 | 4 | 24 | 0.0000178515 |
| Solanum lycopersicum | SL4.0ch02 | 2 | CH_sly_443 | 3 | 5 | 0.000231986 |
| Trifolium pratense | Tp57577_TGAC_v2_LG6 | 2 | CH_tpr_273 | 3 | 6 | 0.000140083 |
| Vigna mungo | CM024072.1 | 2 | CH_vmu_315 | 3 | 6 | 0.000287595 |
| Vanilla planifolia | CM028159.1 | 2 | CH_vpl_118 | 5 | 41 | 0.0000193499 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |