Functional clusters
Information
- Type MapMan
- Description Amino acid metabolism.biosynthesis.pyruvate family.pyruvate-derived amino acids
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00039 | 1 | CH_atr_131 | 3 | 3 | 0.00000344585 |
| Amborella trichopoda | AmTr_v1.0_scaffold00039 | 2 | CH_atr_131 | 3 | 3 | 0.00000344585 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| 4.1.3.2.5.1 | Amino acid metabolism.biosynthesis.pyruvate family.pyruvate-derived amino acids.leucine.2-isopropylmalate synthase | 11 |
| 4.1.3.2.5.2.1 | Amino acid metabolism.biosynthesis.pyruvate family.pyruvate-derived amino acids.leucine.isopropylmalate isomerase heterodimer.large subunit | 32 |
| 4.1.3.2.5.2.2 | Amino acid metabolism.biosynthesis.pyruvate family.pyruvate-derived amino acids.leucine.isopropylmalate isomerase heterodimer.small subunit | 29 |
| 4.1.3.2.5.3 | Amino acid metabolism.biosynthesis.pyruvate family.pyruvate-derived amino acids.leucine.3-isopropylmalate dehydrogenase | 24 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |